Mathias Möhl

According to our database, Mathias Möhl authored at least 18 papers between 2006 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2015

SPARSE: quadratic time simultaneous alignment and folding of RNAs without sequence-based heuristics.

Sebastian Will, Christina Otto, Milad Miladi, Mathias Möhl, Rolf Backofen

Bioinform., 2015

2014

Local Exact Pattern Matching for Non-FixedRNA Structures.

Mika Amit, Rolf Backofen, Steffen Heyne, Gad M. Landau, Mathias Möhl, Christina Otto, Sebastian Will

IEEE ACM Trans. Comput. Biol. Bioinform., 2014

ExpaRNA-P: simultaneous exact pattern matching and folding of RNAs.

Christina Otto, Mathias Möhl, Steffen Heyne, Mika Amit, Gad M. Landau, Rolf Backofen, Sebastian Will

BMC Bioinform., 2014

2013

Bellman's GAP - a language and compiler for dynamic programming in sequence analysis.

Georg Sauthoff, Mathias Möhl, Stefan Janssen, Robert Giegerich

Bioinform., 2013

SPARSE: Quadratic Time Simultaneous Alignment and Folding of RNAs without Sequence-Based Heuristics.

Sebastian Will, Christina Schmiedl, Milad Miladi, Mathias Möhl, Rolf Backofen

Proceedings of the Research in Computational Molecular Biology, 2013

2012

CARNA - alignment of RNA structure ensembles.

Dragos Alexandru Sorescu, Mathias Möhl, Martin Mann, Rolf Backofen, Sebastian Will

Nucleic Acids Res., 2012

Exact Pattern Matching for RNA Structure Ensembles.

Christina Schmiedl, Mathias Möhl, Steffen Heyne, Mika Amit, Gad M. Landau, Sebastian Will, Rolf Backofen

Proceedings of the Research in Computational Molecular Biology, 2012

Local Exact Pattern Matching for Non-fixed RNA Structures.

Mika Amit, Rolf Backofen, Steffen Heyne, Gad M. Landau, Mathias Möhl, Christina Schmiedl, Sebastian Will

Proceedings of the Combinatorial Pattern Matching - 23rd Annual Symposium, 2012

2011

Fast RNA structure alignment for crossing input structures.

Rolf Backofen, Gad M. Landau, Mathias Möhl, Dekel Tsur, Oren Weimann

J. Discrete Algorithms, 2011

2010

Lifting Prediction to Alignment of RNA Pseudoknots.

Mathias Möhl, Sebastian Will, Rolf Backofen

J. Comput. Biol., 2010

Sparsification of RNA structure prediction including pseudoknots.

Mathias Möhl, Raheleh Salari, Sebastian Will, Rolf Backofen, Süleyman Cenk Sahinalp

Algorithms Mol. Biol., 2010

Time and Space Efficient RNA-RNA Interaction Prediction via Sparse Folding.

Raheleh Salari, Mathias Möhl, Sebastian Will, Süleyman Cenk Sahinalp, Rolf Backofen

Proceedings of the Research in Computational Molecular Biology, 2010

Alignnment of RNA with Structures of Unlimited Complexity.

Alessandro Dal Palù, Mathias Möhl, Sebastian Will

Proceedings of the Workshop on Constraint Based Methods for Bioinformatics, 2010

A Propagator for Maximum Weight String Alignment with Arbitrary Pairwise Dependencies.

Alessandro Dal Palù, Mathias Möhl, Sebastian Will

Proceedings of the Principles and Practice of Constraint Programming - CP 2010, 2010

2009

Dynamic programming based RNA pseudoknot alignment.

Mathias Möhl

PhD thesis, 2009

2008

Fixed Parameter Tractable Alignment of RNA Structures Including Arbitrary Pseudoknots.

Mathias Möhl, Sebastian Will, Rolf Backofen

Proceedings of the Combinatorial Pattern Matching, 19th Annual Symposium, 2008

2007

Mildly Context-Sensitive Dependency Languages.

Marco Kuhlmann, Mathias Möhl

Proceedings of the ACL 2007, 2007

2006

Extended Cross-Serial Dependencies in Tree Adjoining Grammars.

Marco Kuhlmann, Mathias Möhl

Proceedings of the Eighth International Workshop on Tree Adjoining Grammar and Related Formalisms, 2006