Mary Yang

According to our database, Mary Yang authored at least 89 papers between 2003 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Missing Value Recovery for Single Cell RNA Sequencing Data.

Wenjuan Zhang, William Yang, John R. Talburt, Sherman Morton Weissman, Mary Qu Yang

Proceedings of the International Conference on Computational Science and Computational Intelligence, 2021

2019

Image Captioning with Bidirectional Semantic Attention-Based Guiding of Long Short-Term Memory.

Pengfei Cao, Zhongyi Yang, Liang Sun, Yanchun Liang, Mary Qu Yang, Renchu Guan

Neural Process. Lett., 2019

Feature space learning model.

Renchu Guan, Xu Wang, Maurizio Marchese, Mary Qu Yang, Yanchun Liang, Chen Yang

J. Ambient Intell. Humaniz. Comput., 2019

Correction to: MISC: missing imputation for single-cell RNA sequencing data.

Mary Qu Yang, Sherman Morton Weissman, William Yang, Jialing Zhang, Allon Canaan, Renchu Guan

BMC Syst. Biol., 2019

Characterizing Mutually Exclusive Driver Mutations in Pan-Cancer.

Yifan Zhang, William Yang, Jun S. Liu, Mary Qu Yang

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

Correction to: Dependability enhancing mechanisms for integrated clinical environments.

Wenbing Zhao, Mary Qu Yang

J. Supercomput., 2018

A Knowledge Base Completion Model Based on Path Feature Learning.

Xixun Lin, Yanchun Liang, Limin Wang, Xu Wang, Mary Qu Yang, Renchu Guan

Int. J. Comput. Commun. Control, 2018

MISC: missing imputation for single-cell RNA sequencing data.

Mary Qu Yang, Sherman Morton Weissman, William Yang, Jialing Zhang, Allon Canaan, Renchu Guan

BMC Syst. Biol., 2018

Systems biology analysis reveals new insights into invasive lung cancer.

Dan Li, William Yang, Carolyn Arthur, Jun S. Liu, Carolina Cruz-Niera, Mary Qu Yang

BMC Syst. Biol., 2018

The emerging role of microRNA-4487/6845-3p in Alzheimer's disease pathologies is induced by Aβ25-35 triggered in SH-SY5Y cell.

Ling Hu, Rong Zhang, Qiong Yuan, Yinping Gao, Mary Qu Yang, Chunxiang Zhang, Jiankun Huang, Yufei Sun, William Yang, Jack Y. Yang, Zhen-li Min, Jing Cheng, Youping Deng, Xiamin Hu

BMC Syst. Biol., 2018

A hotspots analysis-relation discovery representation model for revealing diabetes mellitus and obesity.

Guannan He, Yanchun Liang, Yan Chen, William Yang, Jun S. Liu, Mary Qu Yang, Renchu Guan

BMC Syst. Biol., 2018

Increased AURKA promotes cell proliferation and predicts poor prognosis in bladder cancer.

Mengjie Guo, Sicheng Lu, Hongming Huang, Yaohui Wang, Mary Qu Yang, Ye Yang, Zhimin Fan, Bin Jiang, Youping Deng

BMC Syst. Biol., 2018

Co-expression of long non-coding RNAs and autism risk genes in the developing human brain.

Steven B. Cogill, Anand K. Srivastava, Mary Qu Yang, Liangjiang Wang

BMC Syst. Biol., 2018

Correction to: Identification and characterization of conserved lncRNAs in human and rat brain.

Dan Li, Mary Qu Yang

BMC Bioinform., 2018

2017

Dependability enhancing mechanisms for integrated clinical environments.

Wenbing Zhao, Mary Qu Yang

J. Supercomput., 2017

Identification and characterization of conserved lncRNAs in human and rat brain.

Dan Li, Mary Qu Yang

BMC Bioinform., 2017

Toward precision breast cancer survival prediction utilizing combined whole genome-wide expression and somatic mutation analysis.

Yifan Zhang, William Yang, Dan Li, Jack Y. Yang, Renchu Guan, Weida Tong, Mary Qu Yang

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Invited talk: Developing deep multi-source intelligent learning that facilitates the advancement of single cell genomics research.

William Yang, Sherman Morton Weissman, Renchu Guan, Jialing Zhang, Allon Canaan, Mary Qu Yang

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Comprehensive analysis of pulmonary adenocarcinoma in situ (AIS) revealed new insights into lung cancer progression.

Dan Li, William Yang, Yifan Zhang, Jack Y. Yang, Weida Tong, Renchu Guan, Mary Qu Yang

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Relation discovery and hotspots analysis on diabetes mellitus and obesity with representation model.

Guannan He, Yanchun Liang, Yan Chen, William Yang, Jun S. Liu, Mary Qu Yang, Renchu Guan

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Protein-Protein Interaction Extraction Using Attention-Based Convolution Neural Networks.

Hao Zhang, Mary Qu Yang, Xiaoyue Feng, William Yang, Weida Tong, Renchu Guan

Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016

High-throughput state-machine replication using software transactional memory.

Wenbing Zhao, William Yang, Honglei Zhang, Jack Y. Yang, Xiong Luo, Yueqin Zhu, Mary Yang, Chaomin Luo

J. Supercomput., 2016

Byzantine fault tolerance for collaborative editing with commutative operations.

Wenbing Zhao, Mamdouh Babi, William Yang, Xiong Luo, Yueqin Zhu, Jack Y. Yang, Chaomin Luo, Mary Yang

Proceedings of the 2016 IEEE International Conference on Electro Information Technology, 2016

Visualized analysis of incomplete TCM meridian conductance data.

Jiamin Yuan, Jiachang Chen, Li Huang, Fuping Xu, Mary Qu Yang, Shixing Yan, Guo-Zheng Li, Zhimin Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Prediction of the efficacy of Wuji Pills by machine learning methods.

Haiqing Li, Guo-Zheng Li, William Yang, Ying Chen, Xiaoxin Zhu, Mary Qu Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Comparing of feature selection and classification methods on report-based subhealth data.

Li Huang, Shixing Yan, Jiamin Yuan, Zhiya Zuo, Fuping Xu, Yanzhao Lin, Mary Qu Yang, Zhimin Yang, Guo-Zheng Li

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

A hybrid iterative approach for microarray missing value estimation.

Chong He, Changbo Zhao, Guo-Zheng Li, Wei Zhu, William Yang, Mary Qu Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015

The upregulation of Myb and Peg3 may mediate EGCG inhibition effect on mouse lung adenocarcinoma.

Hong Zhou, Joseph Manthey, Ekaterina Lioutikova, Mary Qu Yang, William Yang, Kenji Yoshigoe, Hong Wang

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Developing automated pipeline for identifying disease-related genomic variants.

Chad Hayden, Dan Li, Kenji Yoshigoe, Mary Yang

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Identification of genes and pathways involved in kidney renal clear cell carcinoma.

William Yang, Kenji Yoshigoe, Xiang Qin, Jun S. Liu, Jack Y. Yang, Andrzej Niemierko, Youping Deng, Yunlong Liu, A. Keith Dunker, Zhongxue Chen, Liangjiang Wang, Dong Xu, Hamid R. Arabnia, Weida Tong, Mary Qu Yang

BMC Bioinform., 2014

Orthology-driven mapping of bidirectional promoters in human and mouse genomes.

Mary Qu Yang, Laura Elnitski

BMC Bioinform., 2014

Advances in translational bioinformatics facilitate revealing the landscape of complex disease mechanisms.

Jack Y. Yang, A. Keith Dunker, Jun S. Liu, Xiang Qin, Hamid R. Arabnia, William Yang, Andrzej Niemierko, Zhongxue Chen, Zuojie Luo, Liangjiang Wang, Yunlong Liu, Dong Xu, Youping Deng, Weida Tong, Mary Qu Yang

BMC Bioinform., 2014

Developing discriminate model and comparative analysis of differentially expressed genes and pathways for bloodstream samples of diabetes mellitus type 2.

Chang Liu, Lili Lu, Quan Kong, Yan Li, Haihua Wu, William Yang, Shandan Xu, Xinyu Yang, Xiaolei Song, Jack Y. Yang, Mary Qu Yang, Youping Deng

BMC Bioinform., 2014

A new statistical approach to combining p-values using gamma distribution and its application to genome-wide association study.

Zhongxue Chen, William Yang, Qingzhong Liu, Jack Y. Yang, Jing Li, Mary Yang

BMC Bioinform., 2014

2010

3D Protein structure prediction with genetic tabu search algorithm.

Xiaolong Zhang, Ting Wang, Huiping Luo, Jack Y. Yang, Youping Deng, Jinshan Tang, Mary Qu Yang

BMC Syst. Biol., 2010

BindN+ for accurate prediction of DNA and RNA-binding residues from protein sequence features.

Liangjiang Wang, Caiyan Huang, Mary Qu Yang, Jack Y. Yang

BMC Syst. Biol., 2010

Feature selection for semi-supervised multi-label learning with application to gene function analysis.

Guo-Zheng Li, Mingyu You, Lei Ge, Jack Y. Yang, Mary Qu Yang

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009

Combining support vector regression with feature selection for multivariate calibration.

Guo-Zheng Li, Hao-Hua Meng, Mary Qu Yang, Jack Y. Yang

Neural Comput. Appl., 2009

An Enhanced Lipschitz Embedding Classifier for Multi-Emotion Speech Analysis.

Mingyu You, Guo-Zheng Li, Jack Y. Yang, Mary Qu Yang

Int. J. Pattern Recognit. Artif. Intell., 2009

Editorial review: engineering modelling and intelligent computing are synergistic in translational medicine research.

Ying Chen, Nazeih M. Botros, Mary Qu Yang

Int. J. Funct. Informatics Pers. Medicine, 2009

Irrelevant gene elimination for Partial Least Squares based Dimension Reduction by using feature probes.

Xue-Qiang Zeng, Guo-Zheng Li, Gengfeng Wu, Jack Y. Yang, Mary Qu Yang

Int. J. Data Min. Bioinform., 2009

Lecture notes: 2010 and beyond, the decade of high-performance computing for the next-generation sequence analysis.

Mary Qu Yang, Jack Y. Yang

Int. J. Comput. Biol. Drug Des., 2009

Promoting inter/multidisciplinary education and research in bioinformatics, systems biology and intelligent computing.

Mary Qu Yang, Andrzej Niemierko, Jack Y. Yang, Yufang Jin

Int. J. Comput. Biol. Drug Des., 2009

The Impact of Supercomputing in the Next Generation Sequencing Data Mining.

Mary Qu Yang, Sang C. Suh, Kaiqi Xiong, Jack Y. Yang, Hamid R. Arabnia

Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2009

Next Generation Sequence Analysis Using Genetic Algorithms on Multi-core Technology.

Kaiqi Xiong, Sang C. Suh, Mary Qu Yang, Jack Y. Yang, Hamid R. Arabnia

Proceedings of the International Joint Conferences on Bioinformatics, 2009

Redundant Gene Selection Based on Particle Swarm Optimization.

Su-Fen Chen, Xue-Qiang Zeng, Guo-Zheng Li, Jack Y. Yang, Mary Qu Yang

Proceedings of the International Joint Conferences on Bioinformatics, 2009

2008

Ensemble Voting System for Multiclass protein fold Recognition.

Yuehui Chen, Feng Chen, Jack Y. Yang, Mary Qu Yang

Int. J. Pattern Recognit. Artif. Intell., 2008

A Personalized Traditional Chinese Medicine System in the case of Cai's gynecology.

Mingyu You, Guo-Zheng Li, Xue-Qiang Zeng, Lei Ge, Lijuan Bi, Suying Huang, Mary Qu Yang, Jack Y. Yang

Int. J. Funct. Informatics Pers. Medicine, 2008

Transforming medicine: functional informatics, drug design, and personalised healthcare.

Jack Y. Yang, Mary Qu Yang

Int. J. Funct. Informatics Pers. Medicine, 2008

Feature selection for gene function prediction using multi-labelled lazy learning.

Yuhai Liu, Guo-Zheng Li, Hongyu Zhang, Mary Qu Yang, Jack Y. Yang

Int. J. Funct. Informatics Pers. Medicine, 2008

New statistical learning theory paradigms adapted to breast cancer diagnosis/classification using image and non-image clinical data.

Walker H. Land Jr., John J. Heine, Thomas Raway, Alda Mizaku, Nataliya Kovalchuk, Jack Y. Yang, Mary Qu Yang

Int. J. Funct. Informatics Pers. Medicine, 2008

Functional informatics and personalised medicine are key synergistic components of translational medicine.

Nazeih M. Botros, Ying Chen, Mary Qu Yang

Int. J. Funct. Informatics Pers. Medicine, 2008

Identification of Intrinsically Unstructured Proteins using hierarchical classifier.

Jack Y. Yang, Mary Qu Yang

Int. J. Data Min. Bioinform., 2008

Feature selection for the imbalanced QSAR problems by using EasyEnsemble.

Tian-Yu Liu, Guo-Zheng Li, Jack Y. Yang, Mary Qu Yang

Int. J. Comput. Biol. Drug Des., 2008

Improving prediction accuracy of drug activities by utilising unlabelled instances with feature selection.

Guo-Zheng Li, Jack Y. Yang, Wen-Cong Lu, Dan Li, Mary Qu Yang

Int. J. Comput. Biol. Drug Des., 2008

2009 and beyond: the decade of personalised medicine.

Pan Du, Simon M. Lin, Mary Qu Yang, Jack Y. Yang

Int. J. Comput. Biol. Drug Des., 2008

Dimension reduction with redundant gene elimination for tumor classification.

Xue-Qiang Zeng, Guo-Zheng Li, Jack Y. Yang, Mary Qu Yang, Gengfeng Wu

BMC Bioinform., 2008

Comparative analyses of bidirectional promoters in vertebrates.

Mary Qu Yang, James Taylor, Laura Elnitski

BMC Bioinform., 2008

Asymmetric bagging and feature selection for activities prediction of drug molecules.

Guo-Zheng Li, Hao-Hua Meng, Wen-Cong Lu, Jack Y. Yang, Mary Qu Yang

BMC Bioinform., 2008

Preface.

Frank Emmert-Streib, Hamid R. Arabnia, Mary Qu Yang

Appl. Artif. Intell., 2008

High Performance Computing and Computational Intelligence: Link to the Translational Medicine and Personalized Healthcare - Banquet Keynote Lecture.

Jack Y. Yang, Mary Qu Yang, Hamid R. Arabnia

Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2008

A Novel Metric for Redundant Gene Elimination Based on Discriminative Contribution.

Xue-Qiang Zeng, Guo-Zheng Li, Jack Y. Yang, Mary Qu Yang

Proceedings of the Bioinformatics Research and Applications, 2008

Abnormal Traffic Detection in VoIP by Using Machine Learning Approaches.

Yuhai Liu, Guo-Zheng Li, Wenqian Yu, Jianqun Xu, Jack Y. Yang, Mary Qu Yang

Proceedings of the 2008 International Conference on Artificial Intelligence, 2008

Word-Based Characterization of the Bidirectional Promoters from the Human DNA-Repair Pathway.

Jens Lichtenberg, Edwin Jacox, Mary Qu Yang, Laura Elnitski, Lonnie R. Welch

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2007

Comprehensive Annotation of Bidirectional Promoters Identifies Co-Regulation among Breast and Ovarian Cancer Genes.

Mary Qu Yang, Laura M. Koehly, Laura Elnitski

PLoS Comput. Biol., 2007

Classification of proteins multiple-labelled and single-labelled with protein functional classes.

Mary Qu Yang, Jack Y. Yang, Okan K. Ersoy

Int. J. Gen. Syst., 2007

Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome.

Mary Qu Yang, Laura Elnitski

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

Rigorous Mapping of Orthologous Bidirectional Promoters in Vertebrates Defines their Evolutionary History.

Mary Qu Yang, James Taylor, Laura Elnitski

Proceedings of the Proceeding of the Second International Multi-Symposium of Computer and Computational Sciences (IMSCCS 2007), 2007

Asymmetric Bagging and Feature Selection for Activities Prediction of Drug Molecules.

Guo-Zheng Li, Hao-Hua Meng, Mary Qu Yang, Jack Y. Yang

Proceedings of the Proceeding of the Second International Multi-Symposium of Computer and Computational Sciences (IMSCCS 2007), 2007

Feature Selection for Co-Training: A QSAR Study.

Guo-Zheng Li, Dan Li, Wen-Cong Lu, Jack Y. Yang, Mary Qu Yang

Proceedings of the 2007 International Conference on Artificial Intelligence, 2007

Predicting Tumor Malignancies using Combined Computational Intelligence, Bioinformatics and Laboratory Molecular Biology Approaches.

Jack Y. Yang, Andrzej Niemierko, Mary Qu Yang, Zuojie Luo, Jianling Li

Proceedings of the 2007 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2007

The 2007 World Congress in Computer Science, Computer Engineering, and Applied Computing Invited Banquet Keynote Lecture: Using Bioinformatics and Machine Learning to Predict Potential Malignancies.

Jack Y. Yang, Mary Qu Yang

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

Classification of Brain Glioma by Using Neural Networks Ensemble with Multi-Task Learning.

Jack Y. Yang, Guo-Zheng Li, Li-Xin Liu, Mary Qu Yang

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

Orthology and Multiple Class Prediction of Functional Elements in the Human Genome.

Mary Qu Yang, Laura Elnitski

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

An Investigation into the Feasibility of Detecting Microscopic Disease Using Machine Learning.

Mary Qu Yang, Jack Y. Yang

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Non-Monotonic Radio-Sensitivity over Tumor Volumes on Adjuvant Radio Therapy A New Insight on Cell Killing and Modeling.

Jack Y. Yang, Andrzej Niemierko, Mary Qu Yang, Youping Deng

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

An Overview of Bidirectional Promoters.

Mary Qu Yang, Laura Elnitski

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Promoter studies in the human genome: one perspective on an unfinished story.

Mary Qu Yang, Laura Elnitski

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

An Effective Interwoven Loop Design Application for Two-Channel Microarray Experiments.

Mehdi Pirooznia, Arun Rawat, Jack Y. Yang, Mary Qu Yang, Ping Gong, Edward J. Perkins, Youping Deng

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Partial Least Squares Based Dimension Reduction with Gene Selection for Tumor Classification.

Guo-Zheng Li, Xue-Qiang Zeng, Jack Y. Yang, Mary Qu Yang

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Support Vector Regression with Feature Selection for the Multivariate Calibration of Spectrofluorimetric Determination of Aromatic Amino Acids.

Guo-Zheng Li, Hao-Hua Meng, Mary Qu Yang, Jack Y. Yang

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Ensemble of Probabilistic Neural Networks for Protein Fold Recognition.

Yuehui Chen, Xueqin Zhang, Mary Qu Yang, Jack Y. Yang

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Feature Selection and Partial Least Squares Based Dimension Reduction for Tumor Classification.

Hualong Bu, Guo-Zheng Li, Xue-Qiang Zeng, Jack Y. Yang, Mary Qu Yang

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

2006

Learning from Sequences with Determining Correlation between Transmembrane and Protein Disorder.

Jack Y. Yang, Mary Qu Yang

Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

Identification of Intrinsically Unstructured Regions in Proteins Using Primary Structure.

Mary Qu Yang, Jack Y. Yang

Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

Assessing protein function using a combination of supervised and unsupervised learning.

Jack Y. Yang, Mary Qu Yang

Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

IUP: Intrinsically Unstructured Protein predictor - A software tool for analyzing polypeptide sequences.

Mary Qu Yang, Jack Y. Yang

Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

2005

Sequential bifurcation Approach to Learning protein Functional Classes.

Mary Qu Yang, Okan K. Ersoy, Jack Y. Yang

Proceedings of the Advances in Bioinformatics and Its Applications, 2005

2003

Exploring Protein Functional Relationships Using Genomic Information and Data Mining Techniques.

Jack Y. Yang, Mary Qu Yang, Okan K. Ersoy

Proceedings of the Artificial Neural Networks and Neural Information Processing, 2003