Mary Jo Ondrechen

According to our database, Mary Jo Ondrechen authored at least 8 papers between 2004 and 2013.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2013

Protein function annotation with Structurally Aligned Local Sites of Activity (SALSAs).

Zhouxi Wang, Pengcheng Yin, Joslynn S. Lee, Ramya Parasuram, Srinivas Somarowthu, Mary Jo Ondrechen

BMC Bioinform., 2013

2012

POOL server: machine learning application for functional site prediction in proteins.

Srinivas Somarowthu, Mary Jo Ondrechen

Bioinform., 2012

2009

Partial Order Optimum Likelihood (POOL): Maximum Likelihood Prediction of Protein Active Site Residues Using 3D Structure and Sequence Properties.

Wenxu Tong, Ying Wei, Leonel F. Murga, Mary Jo Ondrechen, Ronald J. Williams

PLoS Comput. Biol., 2009

2007

Identification of Functional Subclasses in the DJ-1 Superfamily Proteins.

Ying Wei, Dagmar Ringe, Mark A. Wilson, Mary Jo Ondrechen

PLoS Comput. Biol., 2007

Selective prediction of interaction sites in protein structures with THEMATICS.

Ying Wei, Jaeju Ko, Leonel F. Murga, Mary Jo Ondrechen

BMC Bioinform., 2007

2005

Active Site Prediction for Comparative Model Structures with Thematics.

Ihsan A. Shehadi, Alexej Abyzov, Alper Uzun, Ying Wei, Leonel F. Murga, Valentin A. Ilyin, Mary Jo Ondrechen

J. Bioinform. Comput. Biol., 2005

Prediction of active sites for protein structures from computed chemical properties.

Jaeju Ko, Leonel F. Murga, Ying Wei, Mary Jo Ondrechen

Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005

2004

THEMATICS is Effective for Active Site Prediction in Comparative Model Structures.

Ihsan A. Shehadi, Alper Uzun, Leonel F. Murga, Valentin A. Ilyin, Mary Jo Ondrechen

Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC 2004), 2004