Martin Ringwald

According to our database, Martin Ringwald authored at least 31 papers between 1999 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2023

MouseScholar: Evaluating an Image+Text Search System for Biocuration.

Juan Trelles Trabucco, Carla Floricel, Cecilia N. Arighi, Hagit Shatkay, Daniela Raciti, Martin Ringwald, G. Elisabeta Marai

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2021

The mouse Gene Expression Database (GXD): 2021 update.

Richard M. Baldarelli, Constance M. Smith, Jacqueline H. Finger, Terry F. Hayamizu, Ingeborg J. McCright, Jingxia Xu, David R. Shaw, Jonathan S. Beal, Olin Blodgett, Jeff Campbell, Lori E. Corbani, Pete J. Frost, Sharon C. Giannatto, Dave Miers, James A. Kadin, Joel E. Richardson, Martin Ringwald

Nucleic Acids Res., 2021

Utilizing image and caption information for biomedical document classification.

Pengyuan Li, Xiangying Jiang, Gongbo Zhang, Juan Trelles Trabucco, Daniela Raciti, Cynthia L. Smith, Martin Ringwald, G. Elisabeta Marai, Cecilia N. Arighi, Hagit Shatkay

Bioinform., 2021

Corrigendum to: Utilizing image and caption information for biomedical document classification.

Pengyuan Li, Xiangying Jiang, Gongbo Zhang, Juan Trelles Trabucco, Daniela Raciti, Cynthia L. Smith, Martin Ringwald, G. Elisabeta Marai, Cecilia N. Arighi, Hagit Shatkay

Bioinform., 2021

2020

GXD's RNA-Seq and Microarray Experiment Search: using curated metadata to reliably find mouse expression studies of interest.

Constance M. Smith, James A. Kadin, Richard M. Baldarelli, Jonathan S. Beal, Olin Blodgett, Sharon C. Giannatto, Joel E. Richardson, Martin Ringwald

Database J. Biol. Databases Curation, 2020

Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD).

Xiangying Jiang, Martin Ringwald, Judith A. Blake, Hagit Shatkay

Database J. Biol. Databases Curation, 2020

Integrating image caption information into biomedical document classification in support of biocuration.

Xiangying Jiang, Pengyuan Li, James A. Kadin, Judith A. Blake, Martin Ringwald, Hagit Shatkay

Database J. Biol. Databases Curation, 2020

2019

The mouse Gene Expression Database (GXD): 2019 update.

Constance M. Smith, Terry F. Hayamizu, Jacqueline H. Finger, Susan M. Bello, Ingeborg J. McCright, Jingxia Xu, Richard M. Baldarelli, Jon S. Beal, Jeff Campbell, Lori E. Corbani, Pete J. Frost, Jill R. Lewis, Sharon C. Giannatto, Dave Miers, David R. Shaw, James A. Kadin, Joel E. Richardson, Cynthia L. Smith, Martin Ringwald

Nucleic Acids Res., 2019

An effective biomedical document classification scheme in support of biocuration: addressing class imbalance.

Xiangying Jiang, Martin Ringwald, Judith A. Blake, Cecilia N. Arighi, Gongbo Zhang, Hagit Shatkay

Database J. Biol. Databases Curation, 2019

2018

Using Equivalence Axioms from the Mammalian Phenotype Ontology to Facilitate Phenotype and Expression Comparisons.

Susan M. Bello, Terry F. Hayamizu, Cynthia L. Smith, Martin Ringwald

Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2017

The mouse Gene Expression Database (GXD): 2017 update.

Jacqueline H. Finger, Constance M. Smith, Terry F. Hayamizu, Ingeborg J. McCright, Jingxia Xu, Meiyee Law, David R. Shaw, Richard M. Baldarelli, Jon S. Beal, Olin Blodgett, Jeff Campbell, Lori E. Corbani, Jill R. Lewis, Kim L. Forthofer, Pete J. Frost, Sharon C. Giannatto, Lucie N. Hutchins, Dave Miers, Howie Motenko, Kevin R. Stone, Janan T. Eppig, James A. Kadin, Joel E. Richardson, Martin Ringwald

Nucleic Acids Res., 2017

2014

The mouse Gene Expression Database (GXD): 2014 update.

Constance M. Smith, Jacqueline H. Finger, Terry F. Hayamizu, Ingeborg J. McCright, Jingxia Xu, Joanne Berghout, Jeff Campbell, Lori E. Corbani, Kim L. Forthofer, Pete J. Frost, Dave Miers, David R. Shaw, Kevin R. Stone, Janan T. Eppig, James A. Kadin, Joel E. Richardson, Martin Ringwald

Nucleic Acids Res., 2014

2013

EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update.

Terry F. Hayamizu, Michael N. Wicks, Duncan Davidson, Albert Burger, Martin Ringwald, Richard A. Baldock

J. Biomed. Semant., 2013

2012

The mouse-human anatomy ontology mapping project.

Terry F. Hayamizu, Sherri de Coronado, Gilberto Fragoso, Nicholas Sioutos, James A. Kadin, Martin Ringwald

Database J. Biol. Databases Curation, 2012

Using Biomedical Ontologies for Data Representation and Management in the Mouse Genome Informatics (MGI) System.

Li Ni, Carol J. Bult, James A. Kadin, Joel E. Richardson, Martin Ringwald, Janan T. Eppig, Judith A. Blake

Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

2011

The IKMC web portal: a central point of entry to data and resources from the International Knockout Mouse Consortium.

Martin Ringwald, Vivek Iyer, Jeremy C. Mason, Kevin R. Stone, Hamsa D. Tadepally, James A. Kadin, Carol J. Bult, Janan T. Eppig, Darren J. Oakley, Sebastien Briois, Elia Stupka, Vincenza Maselli, Damian Smedley, Songyan Liu, Jens Hansen, Richard A. Baldock, Geoffrey G. Hicks, William C. Skarnes

Nucleic Acids Res., 2011

The mouse Gene Expression Database (GXD): 2011 update.

Jacqueline H. Finger, Constance M. Smith, Terry F. Hayamizu, Ingeborg J. McCright, Janan T. Eppig, James A. Kadin, Joel E. Richardson, Martin Ringwald

Nucleic Acids Res., 2011

Mouse Anatomy Ontologies and GXD.

Terry F. Hayamizu, Martin Ringwald

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences.

Damian Smedley, Paul N. Schofield, Chao-Kung Chen, Vassilis Aidinis, Crysanthi Ainali, Jonathan B. L. Bard, Rudi Balling, Ewan Birney, Andrew Blake, Erik Bongcam-Rudloff, Anthony J. Brookes, Gianni Cesareni, Christina Chandras, Janan T. Eppig, Paul Flicek, Georgios V. Gkoutos, Simon Greenaway, Michael Gruenberger, Jean-Karim Hériché, Andrew Lyall, Ann-Marie Mallon, Dawn Muddyman, Florian Reisinger, Martin Ringwald, Nadia A. Rosenthal, Klaus Schughart, Morris A. Swertz, Gudmundur A. Thorisson, Michael Zouberakis, John M. Hancock

Database J. Biol. Databases Curation, 2010

2009

The caBIG terminology review process.

James J. Cimino, Terry F. Hayamizu, Olivier Bodenreider, Brian Davis, Grace A. Stafford, Martin Ringwald

J. Biomed. Informatics, 2009

2008

Using bio-ontologies as data annotation, integration & analytical tools at the Mouse Genome Informatics resource.

Anna V. Anagnostopoulos, Judith A. Blake, Carol J. Bult, Martin Ringwald, Joel E. Richardson, James A. Kadin, Janan T. Eppig

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007

The mouse Gene Expression Database (GXD): 2007 update.

Constance M. Smith, Jacqueline H. Finger, Terry F. Hayamizu, Ingeborg J. McCright, Janan T. Eppig, James A. Kadin, Joel E. Richardson, Martin Ringwald

Nucleic Acids Res., 2007

2005

Data Integration in the Mouse Genome Informatics (MGI) Database.

Donnie Qi, Judith A. Blake, James A. Kadin, Joel E. Richardson, Martin Ringwald, Janan T. Eppig, Carol J. Bult

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

Of Mice and Men: Aligning Mouse and Human Anatomies.

Olivier Bodenreider, Terry F. Hayamizu, Martin Ringwald, Sherri de Coronado, Songmao Zhang

Proceedings of the AMIA 2005, 2005

2004

The mouse Gene Expression Database (GXD): updates and enhancements.

David P. Hill, Dale A. Begley, Jacqueline H. Finger, Terry F. Hayamizu, Ingeborg J. McCright, Constance M. Smith, Jon S. Beal, Lori E. Corbani, Judith A. Blake, Janan T. Eppig, James A. Kadin, Joel E. Richardson, Martin Ringwald

Nucleic Acids Res., 2004

From Sipping on a Straw to Drinking from a Fire Hose: Data Integration in a Public Genome Database.

Joel E. Richardson, James A. Kadin, Judith A. Blake, Carol J. Bult, Janan T. Eppig, Martin Ringwald

Proceedings of the 20th International Conference on Data Engineering, 2004

2002

An open letter to the scientific journals.

Catherine A. Ball, Gavin Sherlock, Helen E. Parkinson, Philippe Rocca-Serra, Catherine Brooksbank, Helen C. Causton, Duccio Cavalieri, Terry Gaasterland, Pascal Hingamp, Frank C. P. Holstege, Martin Ringwald, Paul T. Spellman, Christian J. Stoeckert Jr., Jason E. Stewart, Ronald C. Taylor, Alvis Brazma, John Quackenbush

Bioinform., 2002

2001

The Mouse Gene Expression Database (GXD).

Martin Ringwald, Janan T. Eppig, Dale A. Begley, John P. Corradi, Ingeborg J. McCright, Terry F. Hayamizu, David P. Hill, James A. Kadin, Joel E. Richardson

Nucleic Acids Res., 2001

2000

GXD: a Gene Expression Database for the laboratory mouse: current status and recent enhancements.

Martin Ringwald, Janan T. Eppig, James A. Kadin, Joel E. Richardson

Nucleic Acids Res., 2000

Mouse Genome Informatics in a New Age of Biological Inquiry.

Carol J. Bult, Joel E. Richardson, Judith A. Blake, James A. Kadin, Martin Ringwald, Janan T. Eppig

Proceedings of the 1st IEEE International Symposium on Bioinformatics and Biomedical Engineering, 2000

1999

GXD: a gene expression database for the laboratory mouse. The Gene Expression Database Group.

Martin Ringwald, Mary E. Mangan, Janan T. Eppig, James A. Kadin, Joel E. Richardson

Nucleic Acids Res., 1999