Martin Larralde

According to our database, Martin Larralde authored at least 8 papers between 2017 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Horned-OWL.

Phillip Lord, Björn Gehrke, Martin Larralde, Janna Hastings, Filippo De Bortoli, James A. Overton, James P. Balhoff, Jennifer D. Warrender

Dataset, December, 2024

Horned-OWL: Flying Further and Faster with Ontologies.

Phillip Lord, Björn Gehrke, Martin Larralde, Janna Hastings, Filippo De Bortoli, James A. Overton, James P. Balhoff, Jennifer D. Warrender

TGDK, 2024

2023

PyHMMER: a Python library binding to HMMER for efficient sequence analysis.

Martin Larralde, Georg Zeller

Bioinform., May, 2023

proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes.

Anthony Fullam, Ivica Letunic, Thomas S. B. Schmidt, Quinten R. Ducarmon, Nicolai Karcher, Supriya Khedkar, Michael Kuhn, Martin Larralde, Oleksandr M. Maistrenko, Lukas Malfertheiner, Alessio Milanese, João F. Matias Rodrigues, Claudia Sanchis-López, Christian Schudoma, Damian Szklarczyk, Shinichi Sunagawa, Georg Zeller, Jaime Huerta-Cepas, Christian von Mering, Peer Bork, Daniel R. Mende

Nucleic Acids Res., January, 2023

2022

Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes.

Martin Larralde

J. Open Source Softw., 2022

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies.

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris, William R. Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, Hyeongsik Kim, Hüseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Raymund Stefancsik, Sofia M. C. Robb, Sabrina Toro, Nicole A. Vasilevsky, Ramona L. Walls, Christopher J. Mungall, David Osumi-Sutherland

CoRR, 2022

Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa A. Haendel, Nomi L. Harris, William R. Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, Hyeongsik Kim, Hüseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Raymund Stefancsik, Sofia M. C. Robb, Sabrina Toro, Nicole A. Vasilevsky, Ramona L. Walls, Christopher J. Mungall, David Osumi-Sutherland

Database J. Biol. Databases Curation, 2022

2017

mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data.

Martin Larralde, Thomas N. Lawson, Ralf J. M. Weber, Pablo A. Moreno, Kenneth Haug, Philippe Rocca-Serra, Mark R. Viant, Christoph Steinbeck, Reza M. Salek

Bioinform., 2017