Martin J. Aryee

According to our database, Martin J. Aryee authored at least 7 papers between 2009 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

A (fire)cloud-based DNA methylation data preprocessing and quality control platform.

Divy Kangeyan, Andrew J. Dunford, Sowmya Iyer, Chip Stewart, Megan Hanna, Gad Getz, Martin J. Aryee

BMC Bioinform., 2019

2018

diffloop: a computational framework for identifying and analyzing differential DNA loops from sequencing data.

Caleb A. Lareau, Martin J. Aryee

Bioinform., 2018

2014

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.

Martin J. Aryee, Andrew E. Jaffe, Héctor Corrada Bravo, Christine Ladd-Acosta, Andrew P. Feinberg, Kasper D. Hansen, Rafael A. Irizarry

Bioinform., 2014

2013

Identification of direction in gene networks from expression and methylation.

David M. Simcha, Laurent Younes, Martin J. Aryee, Donald Geman

BMC Syst. Biol., 2013

2012

nEASE: a method for gene ontology subclassification of high-throughput gene expression data.

Thomas W. Chittenden, Eleanor Howe, Jennifer M. Taylor, Jessica Cara Mar, Martin J. Aryee, Harold Gómez, Razvan Sultana, John C. Braisted, Sarita J. Nair, John Quackenbush, Chris Holmes

Bioinform., 2012

2010

Subset Quantile Normalization Using Negative Control Features.

Zhijin Wu, Martin J. Aryee

J. Comput. Biol., 2010

2009

An improved empirical bayes approach to estimating differential gene expression in microarray time-course data: BETR (Bayesian Estimation of Temporal Regulation).

Martin J. Aryee, José A. Gutiérrez-Pabello, Igor Kramnik, Tapabrata Maiti, John Quackenbush

BMC Bioinform., 2009