Martin Dugas

Orcid: 0000-0001-9740-0788

Affiliations:
  • Heidelberg University Hospital, Germany
  • University of Münster, Germany (former)


According to our database1, Martin Dugas authored at least 117 papers between 1994 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Online presence:

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Bibliography

2024
Next-generation study databases require FAIR, EHR-integrated, and scalable Electronic Data Capture for medical documentation and decision support.
npj Digit. Medicine, 2024

Evaluation of technical approaches for real-time data transfer from electronic health record systems.
Comput. Methods Programs Biomed., 2024

2023
Federated electronic data capture (fEDC): Architecture and prototype.
J. Biomed. Informatics, February, 2023

Portal of Medical Data Models: Application in Federated Data Capture.
Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

2022
Cogito: automated and generic comparison of annotated genomic intervals.
BMC Bioinform., 2022

Secure Multi-Party Computation Based Distributed Feasibility Queries - A HiGHmed Use Case.
Proceedings of the German Medical Data Sciences 2022 - Future Medicine: More Precise, More Integrative, More Sustainable! - Proceedings of the Joint Conference of the 67th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) and the 14th Annual Meeting of the TMF, 2022

2021
Pragmatic MDR: a metadata repository with bottom-up standardization of medical metadata through reuse.
BMC Medical Informatics Decis. Mak., 2021

A Topical Collection on ICT for Health Science Research - EFMI Special Topic Conference.
J. Medical Syst., 2021

Differential transcript usage analysis of bulk and single-cell RNA-seq data with DTUrtle.
Bioinform., 2021

Comparing SDTM and FHIR<sup>®</sup> for Real World Data from Electronic Health Records for Clinical Trial Submissions.
Proceedings of the Public Health and Informatics, 2021

MainzelHandler: A Library for a Simple Integration and Usage of the Mainzelliste.
Proceedings of the Public Health and Informatics, 2021

FhirExtinguisher: A FHIR Resource Flattening Tool Using FHIRPath.
Proceedings of the Public Health and Informatics, 2021

Portal of Medical Data Models: Stakeholder Feedback and Requirements.
Proceedings of the Public Health and Informatics, 2021

A Seamless Pseudonymization and Randomization Workflow for REDCap.
Proceedings of the Public Health and Informatics, 2021

ODM-DQA-Reporter: A Generic Approach to Assess and Monitor Basic Data Quality of Medical Research Data in Operational Data Model (ODM) Format.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

2020
StudyPortal - Geovisualization of Study Research Networks.
J. Medical Syst., 2020

Conceptual Design, Implementation, and Evaluation of Generic and Standard-Compliant Data Transfer into Electronic Health Records.
Appl. Clin. Inform., 2020

An Evaluation of the Doctor-Interpretability of Generalized Additive Models with Interactions.
Proceedings of the Machine Learning for Healthcare Conference, 2020

The Smart Device System for Movement Disorders: Preliminary Evaluation of Diagnostic Accuracy in a Prospective Study.
Proceedings of the Digital Personalized Health and Medicine - Proceedings of MIE 2020, Medical Informatics Europe, Geneva, Switzerland, April 28, 2020

Evaluation of openEHR Repositories Regarding Standard Compliance.
Proceedings of the Digital Personalized Health and Medicine - Proceedings of MIE 2020, Medical Informatics Europe, Geneva, Switzerland, April 28, 2020

Patient Empowerment Through Digital Voice Pens: A Feasibility Study.
Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

ODM Clinical Data Generator: Syntactically Correct Clinical Data Based on Metadata Definition.
Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

Assessing and Improving the Usability of the Medical Data Models Portal.
Proceedings of the dHealth 2020 - Biomedical Informatics for Health and Care, 2020

2019
Benchmarking of 4C-seq pipelines based on real and simulated data.
Bioinform., 2019

Electronic Image Documentation of Patient Reported Outcomes Using Mobile Technologies.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

Compatible Data Models at Design Stage of Medical Information Systems: Leveraging Related Data Elements from the MDM Portal.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

StudyPortal - A Novel Method to Visualize Study Research Networks.
Proceedings of the ICT for Health Science Research - Proceedings of the EFMI 2019 Special Topic Conference, 2019

Interoperability Improvement of Mobile Patient Survey (MoPat) Implementing Fast Health Interoperability Resources (FHIR).
Proceedings of the ICT for Health Science Research - Proceedings of the EFMI 2019 Special Topic Conference, 2019

Portal of Medical Data Models: Status 2018.
Proceedings of the ICT for Health Science Research - Proceedings of the EFMI 2019 Special Topic Conference, 2019

Reviving 30 Year Old Technology: Lessons Learned from Transferring Patient Data Using Data Matrix Codes.
Proceedings of the ICT for Health Science Research - Proceedings of the EFMI 2019 Special Topic Conference, 2019

Data Structures in Medicine - On the Road to Data Standards.
Proceedings of the Art of Structuring, 2019

2018
Effects of computerized decision support system implementations on patient outcomes in inpatient care: a systematic review.
J. Am. Medical Informatics Assoc., 2018

Connecting healthcare and clinical research: Workflow optimizations through seamless integration of EHR, pseudonymization services and EDC systems.
Int. J. Medical Informatics, 2018

VIPER: a web application for rapid expert review of variant calls.
Bioinform., 2018

appreci8: a pipeline for precise variant calling integrating 8 tools.
Bioinform., 2018

Reproducible Survival Prediction with SEER Cancer Data.
Proceedings of the Machine Learning for Healthcare Conference, 2018

Standardising the Development of ODM Converters: The ODMToolBox.
Proceedings of the Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018

Compatibility Between Metadata Standards: Import Pipeline of CDISC ODM to the Samply.MDR.
Proceedings of the Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018

Conducting a Multilingual Study Researching Traumatised Refugees Utilizing a Patient-Reported Outcome System.
Proceedings of the German Medical Data Sciences: A Learning Healthcare System, 2018

A Web Service to Suggest Semantic Codes Based on the MDM-Portal.
Proceedings of the German Medical Data Sciences: A Learning Healthcare System, 2018

2017
S2O - A software tool for integrating research data from general purpose statistic software into electronic data capture systems.
BMC Medical Informatics Decis. Mak., 2017

BBCAnalyzer: a visual approach to facilitate variant calling.
BMC Bioinform., 2017

Medical Effect of Venous Thromboembolism Prophylaxis Systems and Common Input Categories: Preliminary Findings from a Systematic Review.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

A Secure Architecture to Provide a Medical Emergency Dataset for Patients in Germany and Abroad.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

Operational Data Model Conversion to ResearchKit.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

The Portal of Medical Data Models: Where Have We Been and Where Are We Going?
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

Integrating x4T-EDC into an Image-Portal to Establish an Ophthalmic Reading Center.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

What Information Does Your EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification and Data Access Within Distributed Clinical Research Networks.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017

Automated Transformation of CDISC ODM to OpenClinica.
Proceedings of the German Medical Data Sciences: Visions and Bridges, 2017

Automatic Conversion of Metadata from the Study of Health in Pomerania to ODM.
Proceedings of the Health Informatics Meets eHealth - Digital Insight - Information-Driven Health & Care, 2017

2016
Portal of medical data models: information infrastructure for medical research and healthcare.
Database J. Biol. Databases Curation, 2016

Robust and exact structural variation detection with paired-end and soft-clipped alignments: SoftSV compared with eight algorithms.
Briefings Bioinform., 2016

Key Data Elements in Myeloid Leukemia.
Proceedings of the Exploring Complexity in Health: An Interdisciplinary Systems Approach - Proceedings of MIE2016 at HEC2016, Munich, Germany, 28 August, 2016

Implementation of an ODM and HL7 Compliant Electronic Patient-Reported Outcome System.
Proceedings of the Exploring Complexity in Health: An Interdisciplinary Systems Approach - Proceedings of MIE2016 at HEC2016, Munich, Germany, 28 August, 2016

Converting ODM Metadata to FHIR Questionnaire Resources.
Proceedings of the Exploring Complexity in Health: An Interdisciplinary Systems Approach - Proceedings of MIE2016 at HEC2016, Munich, Germany, 28 August, 2016

2015
ODM2CDA and CDA2ODM: Tools to convert documentation forms between EDC and EHR systems.
BMC Medical Informatics Decis. Mak., 2015

Using electronic health records for clinical research: The case of the EHR4CR project.
J. Biomed. Informatics, 2015

Success criteria for electronic medical record implementations in low-resource settings: a systematic review.
J. Am. Medical Informatics Assoc., 2015

A European inventory of data elements for patient recruitment.
Proceedings of the Digital Healthcare Empowering Europeans, 2015

Standardized Cardiovascular Quality Assurance Forms with Multilingual Support, UMLS Coding and Medical Concept Analyses.
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

Clinical Trial Feasibility Study Questionnaire Analysis.
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

Standardized Quality Assurance Forms for Organ Transplantations with Multilingual Support, Open Access and UMLS Coding.
Proceedings of the Health Informatics Meets eHealth, 2015

Web-Based Multi-Site Feasibility Questionnaire Tool.
Proceedings of the Health Informatics Meets eHealth, 2015

Standardized Mappings - A Framework to Combine Different Semantic Mappers into a Standardized Web-API.
Proceedings of the Health Informatics Meets eHealth, 2015

Annotating Medical Forms Using UMLS.
Proceedings of the Data Integration in the Life Sciences - 11th International Conference, 2015

2014
Characterization of Image Transfer Patterns in a Regional Trauma Network.
J. Medical Syst., 2014

The need for harmonized structured documentation and chances of secondary use - Results of a systematic analysis with automated form comparison for prostate and breast cancer.
J. Biomed. Informatics, 2014

Comparison of Electronic Health Record System Functionalities to support the patient recruitment process in clinical trials.
Int. J. Medical Informatics, 2014

Does single-source create an added value? Evaluating the impact of introducing x4T into the clinical routine on workflow modifications, data quality and cost-benefit.
Int. J. Medical Informatics, 2014

Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data.
Bioinform., 2014

Integrative analysis of histone ChIP-seq and transcription data using Bayesian mixture models.
Bioinform., 2014

Towards a Trial-Ready Mobile Patient Questionnaire System.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014

Protocol Feasibility Workflow Using an Automated Multi-country Patient Cohort System.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014

Analysis of eligibility criteria from ClinicalTrials.gov.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014

Transformations between CDISC ODM and openEHR Archetypes.
Proceedings of the e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th European Medical Informatics Conference, Istanbul, Turkey, August 31, 2014

2013
Evaluation of data completeness in the electronic health record for the purpose of patient recruitment into clinical trials: a retrospective analysis of element presence.
BMC Medical Informatics Decis. Mak., 2013

Detection of significantly differentially methylated regions in targeted bisulfite sequencing data.
Bioinform., 2013

RSVSim: an R/Bioconductor package for the simulation of structural variations.
Bioinform., 2013

Cancer gene prioritization by integrative analysis of mRNA expression and DNA copy number data: a comparative review.
Briefings Bioinform., 2013

Patient Recruitment Workflow with and without a Patient Recruitment System.
Proceedings of the MEDINFO 2013, 2013

Query Engine Optimization for the EHR4CR Protocol Feasibility Scenario.
Proceedings of the MEDINFO 2013, 2013

Are Physicians Interested in the Quality of Life of their Patients? Usage of EHR-integrated Patient Reported Outcomes Data.
Proceedings of the MEDINFO 2013, 2013

Open Metadata for Medical Data Models.
Proceedings of the MEDINFO 2013, 2013

Why We Need a Large-scale Open Metadata Initiative in Health Informatics - A Vision Paper on Open Data Models for Clinical Phenotypes.
Proceedings of the MEDINFO 2013, 2013

Development of Best Practice Principles for Simplifying Eligibility Criteria.
Proceedings of the MEDINFO 2013, 2013

Analyses of Medical Data Models - Identifying Common Concepts and Items in a Repository of Medical Forms.
Proceedings of the MEDINFO 2013, 2013

2012
Qualitative and quantitative evaluation of EHR-integrated mobile patient questionnaires regarding usability and cost-efficiency.
Int. J. Medical Informatics, 2012

CityPlot: Colored ER Diagrams to Visualize Structure and Contents of Databases.
Datenbank-Spektrum, 2012

2011
CIS-based registration of quality of life in a single source approach.
BMC Medical Informatics Decis. Mak., 2011

HIS-based Kaplan-Meier plots - a single source approach for documenting and reusing routine survival information.
BMC Medical Informatics Decis. Mak., 2011

Mapping Turnaround Times (TAT) to a Generic Timeline: A Systematic Review of TAT Definitions in Clinical Domains.
BMC Medical Informatics Decis. Mak., 2011

Concept and implementation of a computer-based reminder system to increase completeness in clinical documentation.
Int. J. Medical Informatics, 2011

R453Plus1Toolbox: an R/Bioconductor package for analyzing Roche 454 Sequencing data.
Bioinform., 2011

Populating the i2b2 Database with Heterogeneous Emr Data: a Semantic Network Approach.
Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

Single Source Information Systems can Improve Data Completeness in Clinical Studies: an Example from Nuclear Medicine.
Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

The Single Source Architecture x4T to Connect Medical Documentation and Clinical Research.
Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

2010
Clinical map document based on XML (cMDX): document architecture with mapping feature for reporting and analysing prostate cancer in radical prostatectomy specimens.
BMC Medical Informatics Decis. Mak., 2010

Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data.
BMC Bioinform., 2010

Steps towards Single Source - Collecting Data about Quality of Life within Clinical Information Systems.
Proceedings of the MEDINFO 2010, 2010

Multidisciplinary Education in Medical Informatics - A course for medical and informatics students.
Proceedings of the MEDINFO 2010, 2010

2009
HIS-based electronic documentation can significantly reduce the time from biopsy to final report for prostate tumours and supports quality management as well as clinical research.
BMC Medical Informatics Decis. Mak., 2009

Case Report: LOINC® Codes for Hospital Information Systems Documents: A Case Study.
J. Am. Medical Informatics Assoc., 2009

Quantitative comparison of microarray experiments with published leukemia related gene expression signatures.
BMC Bioinform., 2009

Integrated analysis of copy number alterations and gene expression: a bivariate assessment of equally directed abnormalities.
Bioinform., 2009

Single Source Information Systems to Connect Patient Care and Clinical Research.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, August 30, 2009

Transferring HIS Data to Population-Based Cancer Registries - Concept and First Implementations.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, August 30, 2009

2008
Benchmarking of hospital information systems: Monitoring of discharge letters and scheduling can reveal heterogeneities and time trends.
BMC Medical Informatics Decis. Mak., 2008

2004
mdclust-exploratory microarray analysis by multidimensional clustering.
Bioinform., 2004

2003
Bioinformatics for Medical Diagnostics: Assessment of Microarray Data in the Context of Clinical Databases.
Proceedings of the AMIA 2003, 2003

2002
Interactive decision support in hepatic surgery.
BMC Medical Informatics Decis. Mak., 2002

Integration of clinical and genetic information - from patient data to gene expression analysis.
Silico Biol., 2002

Complexity of biomedical data models in cardiology: the Intranet-based AF registry.
Comput. Methods Programs Biomed., 2002

Medizinische Informatik und Bioinformatik - ein Kompendium für Studium und Praxis.
Springer, ISBN: 978-3-540-42568-7, 2002

2001
XML-based Visual Data Mining in Medicine.
Proceedings of the MEDINFO 2001, 2001

Impact of integrating clinical and genetic information.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

1999
Intranet-Based Clinical Data Entry.
Proceedings of the AMIA 1999, 1999

1994
Entwicklung einer computergestützten Ganzzell- und Einzelkanal-Analyse zur Untersuchung der Veratridin-Modifikation des myokardialen Natrium-Kanals.
PhD thesis, 1994


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