Martin Boeker

According to our database, Martin Boeker authored at least 63 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Smart hospital: achieving interoperability and raw data collection from medical devices in clinical routine.

Eimo Martens, Hans-Ulrich Haase, Giulio Mastella, Andreas Henkel, Christoph Spinner, Franziska Hahn, Congyu Zou, Augusto Fava-Sanches, Julia Allescher, Daniel Heid, Elena Strauss, Melanie-Maria Maier, Mark Lachmann, Georg Schmidt, Dominik Westphal, Tobias Haufe, David Federle, Daniel Rueckert, Martin Boeker, Matthias Becker, Karl-Ludwig Laugwitz, Alexander Steger, Alexander Müller

Frontiers Digit. Health, 2024

Large Language Models-Enabled Digital Twins for Precision Medicine in Rare Gynecological Tumors.

Jacqueline Lammert, Nicole Pfarr, Leonid Kuligin, Sonja Mathes, Tobias Dreyer, Luise Modersohn, Patrick Metzger, Dyke Ferber, Jakob Nikolas Kather, Daniel Truhn, Lisa Christine Adams, Keno K. Bressem, Sebastian Lange, Kristina Schwamborn, Martin Boeker, Marion Kiechle, Ulrich A. Schatz, Holger Bronger, Maximilian Tschochohei

CoRR, 2024

De-Identifying GRASCCO - A Pilot Study for the De-Identification of the German Medical Text Project (GeMTeX) Corpus.

Christina Lohr, Franz Matthies, Jakob Faller, Luise Modersohn, Andrea Riedel, Udo Hahn, Rebekka Kiser, Martin Boeker, Frank A. Meineke

Proceedings of the German Medical Data Sciences 2024 - Health, 2024

GottBERT: a pure German Language Model.

Raphael Scheible, Johann Frei, Fabian Thomczyk, Henry He, Patric Tippmann, Jochen Knaus, Victor Jaravine, Frank Kramer, Martin Boeker

Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing, 2024

2023

Representation of evidence-based clinical practice guideline recommendations on FHIR.

Gregor Lichtner, Brian S. Alper, Carlo Jurth, Claudia Spies, Martin Boeker, Joerg J. Meerpohl, Falk von Dincklage

J. Biomed. Informatics, March, 2023

Creation of a structured molecular genomics report for Germany as a local adaption of HL7's Genomic Reporting Implementation Guide.

Caroline Stellmach, Julian Sass, Bernd Auber, Martin Boeker, Thomas F. Wienker, Andrew J. Heidel, Manuela Benary, Simon Schumacher, Stephan Ossowski, Frederick Klauschen, Yvonne Möller, Rita Schmutzler, Arsenij Ustjanzew, Patrick Werner, Aurelie Tomczak, Thimo Hölter, Sylvia Thun

J. Am. Medical Informatics Assoc., 2023

Announcement of the German Medical Text Corpus Project (GeMTeX).

Frank A. Meineke, Luise Modersohn, Markus Loeffler, Martin Boeker

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Identifying Relevant FHIR Elements for Data Quality Assessment in the German Core Data Set.

Christian Draeger, Erik Tute, Carsten Oliver Schmidt, Dagmar Waltemath, Martin Boeker, Alfred Winter, Matthias Löbe

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Herding Cats in Pandemic Times - Towards Technological and Organizational Convergence of Heterogeneous Solutions for Investigating and Mastering the Pandemic in University Medical Centers.

Dagmar Krefting, Nico T. Mutters, Rüdiger Pryss, Martin Sedlmayr, Martin Boeker, Christoph Dieterich, Carolin Koll, Martina Mueller, Anna Slagman, Dagmar Waltemath, Antje Wulff, Sven Zenker

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

FHIR DataProvider for ReactAdmin: Leveraging User Interface Creation for Medical Web Applications.

Raphael Scheible, David Alkier, Justus Wendroth, Julian Mayer, Martin Boeker

Proceedings of the Healthcare Transformation with Informatics and Artificial Intelligence, 2023

2022

Validation of Multiple Path Translation for SNOMED CT Localisation.

Stefan Schulz, Martin Boeker, Andrea Prunotto

Proceedings of the Challenges of Trustable AI and Added-Value on Health, 2022

Usability Evaluation of a Modern Multilingual MeSH Browser.

Philip Strecker, Martin Boeker, Simon Buechner, Raphael Scheible

Proceedings of the Advances in Informatics, Management and Technology in Healthcare, 2022

2021

Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data.

Jeffrey G. Klann, Hossein Estiri, Griffin M. Weber, Bertrand Moal, Paul Avillach, Chuan Hong, Amelia L. M. Tan, Brett K. Beaulieu-Jones, Victor M. Castro, Thomas Maulhardt, Alon Geva, Alberto Malovini, Andrew M. South, Shyam Visweswaran, Michele Morris, Malarkodi J. Samayamuthu, Gilbert S. Omenn, Kee Yuan Ngiam, Kenneth D. Mandl, Martin Boeker, Karen L. Olson, Danielle L. Mowery, Robert W. Follett, David A. Hanauer, Riccardo Bellazzi, Jason H. Moore, Ne-Hooi Will Loh, Douglas S. Bell, Kavishwar B. Wagholikar, Luca Chiovato, Valentina Tibollo, Siegbert Rieg, Anthony L. L. J. Li, Vianney Jouhet, Emily Schriver, Zongqi Xia, Meghan Hutch, Yuan Luo, Isaac S. Kohane, Gabriel A. Brat, Shawn N. Murphy

J. Am. Medical Informatics Assoc., 2021

Automatic Generation of German Translation Candidates for SNOMED CT Textual Descriptions.

Andrea Prunotto, Stefan Schulz, Martin Boeker

Proceedings of the Public Health and Informatics, 2021

Availability of Structured Data Elements in Electronic Health Records for Supporting Patient Recruitment in Clinical Trials.

Albert Vass, Ines Reinecke, Martin Boeker, Hans-Ulrich Prokosch, Christian Gulden

Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

AHD2FHIR: A Tool for Mapping of Natural Language Annotations to Fast Healthcare Interoperability Resources - A Technical Case Report.

Raphael Scheible, Deniz Çaliskan, Patrick Fischer, Fabian Thomczyk, Susanne Zabka, Henning Schneider, Martin Boeker, Stefan Schulz, Hans-Ulrich Prokosch, Christian Gulden

Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

A Multilingual Browser Platform for Medical Subject Headings.

Raphael Scheible, Philip Strecker, Suhail Yazijy, Fabian Thomczyk, Ruslan Talpa, Andrea Puhl, Martin Boeker

Proceedings of the Informatics and Technology in Clinical Care and Public Health, 2021

2020

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium.

Gabriel A. Brat, Griffin M. Weber, Nils Gehlenborg, Paul Avillach, Nathan P. Palmer, Luca Chiovato, James J. Cimino, Lemuel R. Waitman, Gilbert S. Omenn, Alberto Malovini, Jason H. Moore, Brett K. Beaulieu-Jones, Valentina Tibollo, Shawn N. Murphy, Sehi L'Yi, Mark S. Keller, Riccardo Bellazzi, David A. Hanauer, Arnaud Serret-Larmande, Alba Gutiérrez-Sacristán, John J. Holmes, Douglas S. Bell, Kenneth D. Mandl, Robert W. Follett, Jeffrey G. Klann, Douglas A. Murad, Luigia Scudeller, Mauro Bucalo, Katie G. Kirchoff, Jean B. Craig, Jihad S. Obeid, Vianney Jouhet, Romain Griffier, Sébastien Cossin, Bertrand Moal, Lav P. Patel, Antonio Bellasi, Hans-Ulrich Prokosch, Detlef Kraska, Piotr Sliz, Amelia L. M. Tan, Kee Yuan Ngiam, Alberto Zambelli, Danielle L. Mowery, Emily Schriver, Batsal Devkota, Robert L. Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne-Sophie Jannot, Stéphane Bréant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Mélodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Esteve, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gaël Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D. Krantz, Andrew M. South, Tianxi Cai, Isaac S. Kohane

npj Digit. Medicine, 2020

Interviews with experts in rare diseases for the development of clinical decision support system software - a qualitative study.

Jannik Schaaf, Hans-Ulrich Prokosch, Martin Boeker, Johanna Schaefer, Jessica Vasseur, Holger Storf, Martin Sedlmayr

BMC Medical Informatics Decis. Mak., 2020

GottBERT: a pure German Language Model.

Raphael Scheible, Fabian Thomczyk, Patric Tippmann, Victor Jaravine, Martin Boeker

CoRR, 2020

How versioning of terminology systems can be supported by ontological models - a case study on TNM tumor classification.

Susanne Zabka, Stefan Schulz, Oliver Brunner, Martin Boeker

Appl. Ontology, 2020

Visualization of Similar Patients in a Clinical Decision Support System for Rare Diseases - A Focus Group Study.

Jannik Schaaf, Martin Sedlmayr, Hans-Ulrich Prokosch, Niels Tegtbauer, Dennis Kadioglu, Johanna Schaefer, Martin Boeker, Holger Storf

Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

Fast Healthcare Interoperability Resources (FHIR^®) Representation of Medication Data Derived from German Procedure Classification Codes (OPS) Using Identification of Medicinal Products (IDMP) Compliant Terminology.

Julian Sass, Susanne Zabka, Andrea Essenwanger, Josef Schepers, Martin Boeker, Sylvia Thun

Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

Needs for an Integration of Specific Data Sources and Items - First Insights of a National Survey Within the German Center for Infection Research.

Carolin E. M. Jakob, Melanie Stecher, Sandra Fuhrmann, Sebastian Wingen-Heimann, Stephanie Heinen, Gabriele Anton, Michael Behnke, Uta Behrends, Martin Boeker, Stefanie Castell, Hans Demski, Maximilian Diefenbach, Jane C. Falgenhauer, Moritz Fritzenwanker, Petra Gastmeier, Markus Gerhard, Stephan Glöckner, Mira Golubovic, Barbara Gunsenheimer Bartmeyer, Josef Ingenerf, Rolf Kaiser, Marie-Luise Körner, Wibke Loag, Alice Mchardy, Ernst Molitor, Ulrich Nübel, Michael Pritsch, Michael Ramharter, Sigbert R. Rieg, Jan Rupp, Daniela Schindler, Dominik Schwudke, Christoph Spinner, Benjamin Stottmeier, Maria J. G. T. Vehreschild, Matthias Willmann, Jörg Janne Vehreschild

Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

The Status Quo of Rare Diseases Centres for the Development of a Clinical Decision Support System - A Cross-Sectional Study.

Jannik Schaaf, Martin Sedlmayr, Hans-Ulrich Prokosch, Thomas Ganslandt, Carmen Schade-Brittinger, Michael von Wagner, Dennis Kadioglu, Katharina Schubert, Min Ae Lee-Kirsch, Bernhard K. Kraemer, Beate Winner, Tobias Mueller, Juergen R. Schaefer, Thomas O. F. Wagner, Leena Bruckner-Tuderman, Oliver Tuescher, Martin Boeker, Holger Storf

Proceedings of the dHealth 2020 - Biomedical Informatics for Health and Care, 2020

2019

Finding the Needle in the Hay Stack: An Open Architecture to Support Diagnosis of Undiagnosed Patients.

Jannik Schaaf, Martin Boeker, Thomas Ganslandt, Christian Haverkamp, Tim Hermann, Dennis Kadioglu, Hans-Ulrich Prokosch, Thomas O. F. Wagner, Michael von Wagner, Johanna Schaefer, Martin Sedlmayr, Holger Storf

Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

Towards a Medication Core Data Set for the Medical Informatics Initiative (MII): Initial Mapping Experience between the German Procedure Classification (OPS) and the Identification of Medicinal Products (IDMP).

Susanne Zabka, Danny Ammon, Thomas Ganslandt, Jan E. Gewehr, Christian Haverkamp, Saskia Kiefer, Heinrich Lautenbacher, Matthias Löbe, Sylvia Thun, Martin Boeker

Proceedings of the Joint Ontology Workshops 2019 Episode V: The Styrian Autumn of Ontology, 2019

Ontology Patterns for Tubular or Spherical Layered Structures. A Case Study from Oncology.

Johannes Herrmann, Susanne Zabka, Martin Boeker, Stefan Schulz

Proceedings of the Joint Ontology Workshops 2019 Episode V: The Styrian Autumn of Ontology, 2019

Establishing an Interoperable Clinical Trial Information System Within MIRACUM.

Hanna Hasselblatt, Johanna Andrae, Adrian Tassoni, Kai Fitzer, Thomas Bahls, Hans-Ulrich Prokosch, Martin Boeker

Proceedings of the ICT for Health Science Research - Proceedings of the EFMI 2019 Special Topic Conference, 2019

Experiences from the National Demonstrator Study within the German Medical Informatics Initiative.

Thomas Ganslandt, Jannik Schaaf, Josef Schepers, Holger Storf, Felix Balzer, Silke Haferkamp, Robert Lodahl, Fabian Prasser, Ulrich Sax, Holger Stenzhorn, Hans-Ulrich Prokosch, Martin Boeker

Proceedings of the AMIA 2019, 2019

2018

Implementing Pharmacogenomic Clinical Decision Support into German Hospitals.

Marc Hinderer, Melanie Boerries, Martin Boeker, Michael Neumaier, Frank-Peter Loubal, Till Acker, Manfred Brunner, Hans-Ulrich Prokosch, Jan Christoph

Proceedings of the Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018

2017

Integrating clinical decision support systems for pharmacogenomic testing into clinical routine - a scoping review of designs of user-system interactions in recent system development.

Marc Hinderer, Martin Boeker, Sebastian A. Wagner, Martin Lablans, Stephanie Newe, Jan L. Hülsemann, Michael Neumaier, Harald Binder, Harald Renz, Till Acker, Hans-Ulrich Prokosch, Martin Sedlmayr

BMC Medical Informatics Decis. Mak., 2017

Analysis and visualization of disease courses in a semantically-enabled cancer registry.

Angel Esteban-Gil, Jesualdo Tomás Fernández-Breis, Martin Boeker

J. Biomed. Semant., 2017

TNM-O: A Modular Ontological Approach for the Representation of Tumour Entities across TNM Versions.

Susanne Zabka, Stefan Schulz, Oliver Brunner, Martin Boeker

Proceedings of the Joint Ontology Workshops 2017 Episode 3: The Tyrolean Autumn of Ontology, 2017

Pizza & Wine: The Need for Educational Tools for Foundational Ontologies.

Stefan Schulz, Martin Boeker, José Antonio Vera Ramos, Ludger Jansen

Proceedings of the Joint Ontology Workshops 2017 Episode 3: The Tyrolean Autumn of Ontology, 2017

2016

TNM-O: ontology support for staging of malignant tumours.

Martin Boeker, Fábio França, Peter Bronsert, Stefan Schulz

J. Biomed. Semant., 2016

2015

Feasibility of an ontology driven tumor-node-metastasis classifier application: A study on colorectal cancer.

Fábio França, Stefan Schulz, Peter Bronsert, Paulo Novais, Martin Boeker

Proceedings of the International Symposium on Innovations in Intelligent SysTems and Applications, 2015

TNM-O an ontology for the Tumor-Node-Metastasis classification of malignant tumors: a study on rectal cancer.

Martin Boeker, Fábio França, Peter Bronsert, Stefan Schulz

Proceedings of the International Conference on Biomedical Ontology, 2015

2014

Validating archetypes for the Multiple Sclerosis Functional Composite.

Michael Braun, Alexander Ulrich Brandt, Stefan Schulz, Martin Boeker

BMC Medical Informatics Decis. Mak., 2014

DebugIT: Ontology-mediated Layered Data Integration for Real-time Antibiotics Resistance Surveillance.

Daniel Schober, Rémy Choquet, Kristof Depraetere, Frank Enders, Philipp Daumke, Marie-Christine Jaulent, Douglas Teodoro, Emilie Pasche, Christian Lovis, Martin Boeker

Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

Analysis and Visualization of Disease Courses in a Semantic Enabled Cancer Registry.

Angel Esteban-Gil, Jesualdo Tomás Fernández-Breis, Martin Boeker

Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

2013

Machine vs. Human Translation of SNOMED CT Terms.

Stefan Schulz, Johannes Bernhardt-Melischnig, Markus Kreuzthaler, Philipp Daumke, Martin Boeker

Proceedings of the MEDINFO 2013, 2013

Time-dependent Migration of Citations Through PubMed and OvidSP Subsets: a Study on a Series of Simultaneous PubMed and OvidSP Searches.

Martin Boeker, Werner Vach, Edith Motschall

Proceedings of the MEDINFO 2013, 2013

BioTopLite: An Upper Level Ontology for the Life SciencesEvolution, Design and Application.

Stefan Schulz, Martin Boeker

Proceedings of the 43. Jahrestagung der Gesellschaft für Informatik, 2013

Measuring the Effect of a Guideline-based Training on Ontology Design with a Competency Questions based Evaluation Approach.

Martin Boeker, Niels Grewe, Johannes Röhl, Daniel Schober, Stefan Schulz, Djamila Seddig-Raufie, Ludger Jansen

Proceedings of the 43. Jahrestagung der Gesellschaft für Informatik, 2013

2012

Usability-driven pruning of large ontologies: the case of SNOMED CT.

Pablo López-García, Martin Boeker, Arantza Illarramendi, Stefan Schulz

J. Am. Medical Informatics Assoc., 2012

Proposed actions are no actions: re-modeling an ontology design pattern with a realist top-level ontology.

Djamila Seddig-Raufie, Ludger Jansen, Daniel Schober, Martin Boeker, Niels Grewe, Stefan Schulz

J. Biomed. Semant., 2012

OntoCheck: verifying ontology naming conventions and metadata completeness in Protégé 4.

Daniel Schober, Ilinca Tudose, Vojtech Svátek, Martin Boeker

J. Biomed. Semant., 2012

Checking Class Labels against Naming Conventions: First experiences with the OntoCheck Protégé plugin.

Daniel Schober, Vojtech Svátek, Martin Boeker

Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

Teaching Good Biomedical Ontology Design.

Martin Boeker, Daniel Schober, Djamila Raufie, Niels Grewe, Johannes Röhl, Ludger Jansen, Stefan Schulz

Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012

2011

Unintended consequences of existential quantifications in biomedical ontologies.

Martin Boeker, Ilinca Tudose, Janna Hastings, Daniel Schober, Stefan Schulz

BMC Bioinform., 2011

Scalable representations of diseases in biomedical ontologies.

Stefan Schulz, Kent A. Spackman, Andrew G. James, Cristian Cocos, Martin Boeker

J. Biomed. Semant., 2011

A T-Box Generator for Testing Scalability of OWL Mereotopological Patterns.

Martin Boeker, Janna Hastings, Daniel Schober, Stefan Schulz

Proceedings of the 8th International Workshop on OWL: Experiences and Directions (OWLED 2011), 2011

2010

Developing DCO: The DebugIT core ontology for antibiotics resistence modelling.

Daniel Schober, Martin Boeker, Stefan Schulz, Ilinca Tudose

Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, 2010

The DebugIT Core Ontology: semantic integration of antibiotics resistance patterns.

Daniel Schober, Martin Boeker, Jessica Bullenkamp, Csaba Huszka, Kristof Depraetere, Douglas Teodoro, Nadia Nadah, Rémy Choquet, Christel Daniel, Stefan Schulz

Proceedings of the MEDINFO 2010, 2010

2009

SNOMED reaching its adolescence: Ontologists' and logicians' health check.

Stefan Schulz, Boontawee Suntisrivaraporn, Franz Baader, Martin Boeker

Int. J. Medical Informatics, 2009

2008

Adapting Clinical Ontologies in Real-World Environments.

Holger Stenzhorn, Stefan Schulz, Martin Boeker, Barry Smith

J. Univers. Comput. Sci., 2008

How Granularity Issues Concern Biomedical Ontology Integration.

Stefan Schulz, Martin Boeker, Holger Stenzhorn

Proceedings of the eHealth Beyond the Horizon, 2008

Post-Coordination in the Mapping of Interface Terms of a Clinical Wound Documentation System to SNOMED CT.

Martin Boeker, Stefan Schulz, Thilo Schuler

Proceedings of the Third International Conference on Knowledge Representation in Medicine, Phoenix, Arizona, USA, May 31st, 2008

The ontology of biological taxa.

Stefan Schulz, Holger Stenzhorn, Martin Boeker

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2007

A Generic, Web-based Clinical Information System Architecture Using HL7 CDA: Successful Implementation in Dermatological Routine Care.

Thilo Schuler, Martin Boeker, Rüdiger Klar, Marcel Müller

Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

The @neurIST Ontology of Intracranial Aneurysms: Providing Terminological Services for an Integrated IT Infrastructure.

Martin Boeker, Holger Stenzhorn, Kai Kumpf, Philippe Bijlenga, Stefan Schulz, Susanne Hanser

Proceedings of the AMIA 2007, 2007

2005

<i>OncoCase</i>: Interdisciplinary Case Based Teaching in Neuro-Oncology Based on the Campus Platform.

Martin Boeker, Christine Müller, Rüdiger Klar, Johannes Lutterbach

Proceedings of the AMIA 2005, 2005