Mark D. Biggin

According to our database, Mark D. Biggin authored at least 14 papers between 2005 and 2013.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2013

Volumetric Semantic Segmentation Using Pyramid Context Features.

Jonathan T. Barron, Mark D. Biggin, Pablo Arbeláez, David W. Knowles, Soile V. E. Keränen, Jitendra Malik

Proceedings of the IEEE International Conference on Computer Vision, 2013

2012

Linking Advanced Visualization and MATLAB for the Analysis of 3D Gene Expression Data.

Oliver Rübel, Soile V. E. Keränen, Mark D. Biggin, David W. Knowles, Gunther H. Weber, Hans Hagen, Bernd Hamann, E. Wes Bethel

Proceedings of the Visualization in Medicine and Life Sciences II, 2012

2011

Visually Relating Gene Expression and in vivo DNA Binding Data.

Min-Yu Huang, Lester W. Mackey, Soile V. E. Keränen, Gunther H. Weber, Michael I. Jordan, David W. Knowles, Mark D. Biggin, Bernd Hamann

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

2010

Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data.

Oliver Rübel, Gunther H. Weber, Min-Yu Huang, E. Wes Bethel, Mark D. Biggin, Charless C. Fowlkes, Cris L. Luengo Hendriks, Soile V. E. Keränen, Michael B. Eisen, David W. Knowles, Jitendra Malik, Hans Hagen, Bernd Hamann

IEEE ACM Trans. Comput. Biol. Bioinform., 2010

Coupling visualization and data analysis for knowledge discovery from multi-dimensional scientific data.

Oliver Rübel, Sean Ahern, E. Wes Bethel, Mark D. Biggin, Hank Childs, Estelle Cormier-Michel, Angela H. DePace, Michael B. Eisen, Charless C. Fowlkes, Cameron G. R. Geddes, Hans Hagen, Bernd Hamann, Min-Yu Huang, Soile V. E. Keränen, David W. Knowles, Cris L. Luengo Hendriks, Jitendra Malik, Jeremy S. Meredith, Peter Messmer, Prabhat

Proceedings of the International Conference on Computational Science, 2010

Nonparametric identification of regulatory interactions from spatial and temporal gene expression data.

Anil Aswani, Soile V. E. Keränen, James Brown, Charless C. Fowlkes, David W. Knowles, Mark D. Biggin, Peter J. Bickel, Claire J. Tomlin

BMC Bioinform., 2010

Quantitative visualization of ChIP-chip data by using linked views.

Min-Yu Huang, Gunther H. Weber, Xiaoyong Li, Mark D. Biggin, Bernd Hamann

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

2009

Visual Exploration of Three-Dimensional Gene Expression Using Physical Views and Linked Abstract Views.

Gunther H. Weber, Oliver Rübel, Min-Yu Huang, Angela H. DePace, Charless C. Fowlkes, Soile V. E. Keränen, Cris L. Luengo Hendriks, Hans Hagen, David W. Knowles, Jitendra Malik, Mark D. Biggin, Bernd Hamann

IEEE ACM Trans. Comput. Biol. Bioinform., 2009

2008

Segmenting Gene Expression Patterns of Early-stage Drosophila Embryos.

Min-Yu Huang, Oliver Rübel, Gunther H. Weber, Cris L. Luengo Hendriks, Mark D. Biggin, Hans Hagen, Bernd Hamann

Proceedings of the Visualization in Medicine and Life Sciences., 2008

2007

PointCloudXplore 2: Visual Exploration of 3D Gene Expression.

Oliver Rübel, Gunther H. Weber, Min-Yu Huang, E. Wes Bethel, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Angela H. DePace, Lisa Simirenko, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Jitendra Malik, David W. Knowles, Bernd Hamann

Proceedings of the Visualization of Large and Unstructured Data Sets: Second workshop of the DFG's International Research Training Group "Visualization of Large and Unstructured Data Sets, 2007

2006

Large-Scale Turnover of Functional Transcription Factor Binding Sites in <i>Drosophila</i>.

Alan M. Moses, Daniel A. Pollard, David A. Nix, Venky N. Iyer, Xiaoyong Li, Mark D. Biggin, Michael B. Eisen

PLoS Comput. Biol., 2006

PointCloudXplore: A Visualization Tool for 3D Gene Expression Data.

Oliver Rübel, Gunther H. Weber, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Lisa Simirenko, Nameeta Y. Shah, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Damir Sudar, Jitendra Malik, David W. Knowles, Bernd Hamann

Proceedings of the Visualization of Large and Unstructured Data Sets: Applications in Geospatial Planning, Modeling and Engineering, 2006

PointCloudXplore: Visual Analysis of 3D Gene Expression Data Using Physical Views and Parallel Coordinates.

Oliver Rübel, Gunther H. Weber, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Lisa Simirenko, Nameeta Y. Shah, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Damir Sudar, Jitendra Malik, David W. Knowles, Bernd Hamann

Proceedings of the 8th Joint Eurographics - IEEE VGTC Symposium on Visualization, 2006

2005

Registering Drosophila Embryos at Cellular Resolution to Build a Quantitative 3D Atlas of Gene Expression Patterns and Morphology.

Charless C. Fowlkes, Jitendra Malik, Cris L. Luengo Hendriks, Soile V. E. Keränen, Mark D. Biggin, David W. Knowles, Damir Sudar

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005