Mark A. Knepper

According to our database, Mark A. Knepper authored at least 10 papers between 1995 and 2019.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2019

PTM-Logo: a program for generation of sequence logos based on position-specific background amino-acid probabilities.

Thammakorn Saethang, Kenneth Hodge, Chin-Rang Yang, Yue Zhao, Ingorn Kimkong, Mark A. Knepper, Trairak Pisitkun

Bioinform., 2019

2018

AbDesigner3D: a structure-guided tool for peptide-based antibody production.

Thammakorn Saethang, Kenneth Hodge, Ingorn Kimkong, D. Michael Payne, Mark A. Knepper, Trairak Pisitkun

Bioinform., 2018

2014

CAMS-RS: Clustering Algorithm for Large-Scale Mass Spectrometry Data Using Restricted Search Space and Intelligent Random Sampling.

Fahad Saeed, Jason D. Hoffert, Mark A. Knepper

IEEE ACM Trans. Comput. Biol. Bioinform., 2014

Exploiting thread-level and instruction-level parallelism to cluster mass spectrometry data using multicore architectures.

Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper

Netw. Model. Anal. Health Informatics Bioinform., 2014

2013

A high performance algorithm for clustering of large-scale protein mass spectrometry data using multi-core architectures.

Fahad Saeed, Jason D. Hoffert, Mark A. Knepper

Proceedings of the Advances in Social Networks Analysis and Mining 2013, 2013

2012

An efficient algorithm for clustering of large-scale mass spectrometry data.

Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

An efficient dynamic programming algorithm for phosphorylation site assignment of large-scale mass spectrometry data.

Fahad Saeed, Trairak Pisitkun, Jason D. Hoffert, Guanghui Wang, Marjan Gucek, Mark A. Knepper

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

High performance phosphorylation site assignment algorithm for mass spectrometry data using multicore systems.

Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper

Proceedings of the ACM International Conference on Bioinformatics, 2012

2011

Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data.

Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert

Proceedings of the ISCA 3rd International Conference on Bioinformatics and Computational Biology, 2011

1995

A Dynamic Numerical Method for Models of the Urine Concentrating Mechanism.

Harold E. Layton, E. Bruce Pitman, Mark A. Knepper

SIAM J. Appl. Math., 1995