Marja-Leena Linne

According to our database, Marja-Leena Linne authored at least 29 papers between 1996 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Accelerating Neural ODEs Using Model Order Reduction.

Mikko Lehtimäki, Lassi Paunonen, Marja-Leena Linne

IEEE Trans. Neural Networks Learn. Syst., January, 2024

2023

Analysis of Network Models with Neuron-Astrocyte Interactions.

Tiina Manninen, Jugoslava Acimovic, Marja-Leena Linne

Neuroinformatics, April, 2023

2020

Astrocyte-mediated spike-timing-dependent long-term depression modulates synaptic properties in the developing cortex.

Tiina Manninen, Ausra Saudargiene, Marja-Leena Linne

PLoS Comput. Biol., 2020

Accelerated Simulation of a Neuronal Population via Mathematical Model Order Reduction.

Mikko Lehtimäki, Ippa Seppälä, Lassi Paunonen, Marja-Leena Linne

Proceedings of the 2nd IEEE International Conference on Artificial Intelligence Circuits and Systems, 2020

2019

Projection-based order reduction of a nonlinear biophysical neuronal network model.

Mikko Lehtimäki, Lassi Paunonen, Marja-Leena Linne

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

2018

Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures.

Tiina Manninen, Jugoslava Acimovic, Riikka Havela, Heidi Teppola, Marja-Leena Linne

Frontiers Neuroinformatics, 2018

Computational Models for Calcium-Mediated Astrocyte Functions.

Tiina Manninen, Riikka Havela, Marja-Leena Linne

Frontiers Comput. Neurosci., 2018

2017

Reproducibility and Comparability of Computational Models for Astrocyte Calcium Excitability.

Tiina Manninen, Riikka Havela, Marja-Leena Linne

Frontiers Neuroinformatics, 2017

Modeling Neuron-Astrocyte Interactions: Towards Understanding Synaptic Plasticity and Learning in the Brain.

Riikka Havela, Tiina Manninen, Ausra Saudargiene, Marja-Leena Linne

Proceedings of the Intelligent Computing Theories and Application, 2017

2011

Information Diversity in Structure and Dynamics of Simulated Neuronal Networks.

Tuomo Mäki-Marttunen, Jugoslava Acimovic, Matti Nykter, Juha Kesseli, Keijo Ruohonen, Olli Yli-Harja, Marja-Leena Linne

Frontiers Comput. Neurosci., 2011

Modeling Signal Transduction Leading to Synaptic Plasticity: Evaluation and Comparison of Five Models.

Tiina Manninen, Katri Hituri, Eeva Toivari, Marja-Leena Linne

EURASIP J. Bioinform. Syst. Biol., 2011

Modeling of Neuronal Growth <i>In Vitro</i>: Comparison of Simulation Tools NETMORPH and CX3D.

Jugoslava Acimovic, Tuomo Mäki-Marttunen, Riikka Havela, Heidi Teppola, Marja-Leena Linne

EURASIP J. Bioinform. Syst. Biol., 2011

Computational study of noise in a large signal transduction network.

Jukka Intosalmi, Tiina Manninen, Keijo Ruohonen, Marja-Leena Linne

BMC Bioinform., 2011

2010

Postsynaptic Signal Transduction Models for Long-Term Potentiation and Depression.

Tiina Manninen, Katri Hituri, Jeanette Hellgren Kotaleski, Kim T. Blackwell, Marja-Leena Linne

Frontiers Comput. Neurosci., 2010

2008

Stochastic Differential Equation Model for Cerebellar Granule Cell Excitability.

Antti Saarinen, Marja-Leena Linne, Olli Yli-Harja

PLoS Comput. Biol., 2008

2007

Computational Methods for Estimation of Cell Cycle Phase Distributions of Yeast Cells.

Antti Niemistö, Matti Nykter, Tommi Aho, Henna Jalovaara, Kalle Marjanen, Miika Ahdesmäki, Pekka Ruusuvuori, Mikko Tiainen, Marja-Leena Linne, Olli Yli-Harja

EURASIP J. Bioinform. Syst. Biol., 2007

2006

Modeling single neuron behavior using stochastic differential equations.

Antti Saarinen, Marja-Leena Linne, Olli Yli-Harja

Neurocomputing, 2006

Comparison of automated parameter estimation methods for neuronal signaling networks.

Antti Pettinen, Olli Yli-Harja, Marja-Leena Linne

Neurocomputing, 2006

A novel approach to model neuronal signal transduction using stochastic differential equations.

Tiina Manninen, Marja-Leena Linne, Keijo Ruohonen

Neurocomputing, 2006

Properties and roles of BK_Ca channels in cultured cerebellar granule neuron: Experimental and simulation studies.

Marja-Leena Linne, Tuula O. Jalonen

Neurocomputing, 2006

Developing Itô stochastic differential equation models for neuronal signal transduction pathways.

Tiina Manninen, Marja-Leena Linne, Keijo Ruohonen

Comput. Biol. Chem., 2006

Discrete stochastic simulation of cell signaling: comparison of computational tools.

Tiina Manninen, Eeva Makiraatikka, Antti Ylipää, Antti Pettinen, Kalle Leinonen, Marja-Leena Linne

Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006

2005

Simulation tools for biochemical networks: evaluation of performance and usability.

Antti Pettinen, Tommi Aho, Olli-Pekka Smolander, Tiina Manninen, Antti Saarinen, Kaisa-Leena Taattola, Olli Yli-Harja, Marja-Leena Linne

Bioinform., 2005

2004

A model integrating the cerebellar granule neuron excitability and calcium signaling pathways.

Marja-Leena Linne, Tiina Manninen, Tuula O. Jalonen

Neurocomputing, 2004

2003

Estimation and inversion of the effects of cell population asynchrony in gene expression time-series.

Harri Lähdesmäki, Heikki Huttunen, Tommi Aho, Marja-Leena Linne, Jari Niemi, Juha Kesseli, Ronald K. Pearson, Olli Yli-Harja

Signal Process., 2003

Simulations of the cultured granule neuron excitability.

Marja-Leena Linne, Tuula O. Jalonen

Neurocomputing, 2003

Estimation of population effects in synchronized budding yeast experiments.

Antti Niemistö, Tommi Aho, Henna Thesleff, Mikko Tiainen, Kalle Marjanen, Marja-Leena Linne, Olli Yli-Harja

Proceedings of the Image Processing: Algorithms and Systems II, 2003

2000

Mathematical model of a small neuron.

Marja-Leena Linne, Tuula O. Jahnen

Proceedings of the 10th European Signal Processing Conference, 2000

1996

Simultaneous Detection of Action Potential Current Waveforms and Single Ion Channel Openings in Rat Cerebellar Granule Cells.

Marja-Leena Linne, S. S. Oja, Tuula O. Jalonen

Int. J. Neural Syst., 1996