Maria Emília M. T. Walter

Orcid: 0000-0001-6822-931X

According to our database1, Maria Emília M. T. Walter authored at least 81 papers between 1998 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Democratising Artificial Intelligence for Pandemic Preparedness and Global Governance in Latin American and Caribbean Countries.
CoRR, 2024

2023
A Barrier for Further Approximating Sorting by Transpositions.
J. Comput. Biol., December, 2023

2022
A new 1.375-approximation algorithm for sorting by transpositions.
Algorithms Mol. Biol., 2022

2021
CellHeap: A Workflow for Optimizing COVID-19 Single-Cell RNA-Seq Data Processing in the Santos Dumont Supercomputer.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2021

Machine Learning Studies of Non-coding RNAs based on Artificially Constructed Training Data.
Proceedings of the 14th International Joint Conference on Biomedical Engineering Systems and Technologies, 2021

2020
Are spliced ncRNA host genes distinct classes of lncRNAs?
Theory Biosci., 2020

An algebraic 1.375-approximation algorithm for the Transposition Distance Problem.
CoRR, 2020

The Brazilian School Girls' Perspectives on a Computer Science Major.
CLEI Electron. J., 2020

Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene Synthases.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

Meninas.comp Project: Programming for Girls in High School in Brazil.
Proceedings of the Research on Equity and Sustained Participation in Engineering, 2020

What do Female Students in Middle and High Schools Think about Computer Science Majors in Brasilia, Brazil? A Survey in 2011 and 2019.
Proceedings of the IEEE Frontiers in Education Conference, 2020

2019
Managing data provenance for bioinformatics workflows using AProvBio.
Int. J. Comput. Biol. Drug Des., 2019

Venom Gland Peptides of Arthropods from the Brazilian Cerrado Biome Unveiled by Transcriptome Analysis.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2019

2018
Formalization of Block Pruning: Reducing the Number of Cells Computed in Exact Biological Sequence Comparison Algorithms.
Comput. J., 2018

Live neighbor-joining.
BMC Bioinform., 2018

Human-Computer Interaction Communicability Evaluation Method Applied to Bioinformatics.
Proceedings of the Trends and Advances in Information Systems and Technologies, 2018

A Workflow for Predicting MicroRNAs Targets via Accessibility in Flavivirus Genomes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

An Argumentation Theory-Based Multiagent Model to Annotate Proteins.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

Graph Databases in Molecular Biology.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

S^2FS : Single Score Feature Selection Applied to the Problem of Distinguishing Long Non-coding RNAs from Protein Coding Transcripts.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

A Genetic Algorithm for Character State Live Phylogeny.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

2017
A terpenoid metabolic network modelled as graph database.
Int. J. Data Min. Bioinform., 2017

BioNimbuZ: a federated cloud platform for bioinformatics applications.
Int. J. Data Min. Bioinform., 2017

Using a multi-objective artificial immune system approach for biodiversity conservation.
Proceedings of the 13th International Conference on Natural Computation, 2017

A Heuristic for the Live Parsimony Problem.
Proceedings of the Biomedical Engineering Systems and Technologies, 2017

A Branch and Bound for the Large Live Parsimony Problem.
Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2017), 2017

Distance-based Live Phylogeny.
Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2017), 2017

Data provenance management for bioinformatics workflows using NoSQL database systems in a cloud computing environment.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

AProvBio: An architecture for data provenance in bioinformatics workflows using graph database.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016
SnoReport 2.0: new features and a refined Support Vector Machine to improve snoRNA identification.
BMC Bioinform., 2016

2Path: A terpenoid metabolic network modeled as graph database.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

BioNimbuZ: A federated cloud platform for bioinformatics applications.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

An evaluation of data replication for bioinformatics workflows on NoSQL systems.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015
Knowledge-based reasoning to annotate noncoding RNA using multi-agent system.
J. Bioinform. Comput. Biol., 2015

Using Multi-Objective Artificial Immune Systems to Find Core Collections Based on Molecular Markers.
Proceedings of the Genetic and Evolutionary Computation Conference, 2015

A Multi-objective Optimization Approach Associated to Climate Change Analysis to Improve Systematic Conservation Planning.
Proceedings of the Evolutionary Multi-Criterion Optimization, 2015

A study of genomic data provenance in NoSQL document-oriented database systems.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
Genome-Wide Identification of Non-coding RNAs in Komagatella pastoris str. GS115.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2014

Storage Policy for Genomic Data in Hybrid Federated Clouds.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2014

Multi-objective optimization applied to systematic conservation planning and spatial conservation priorities under climate change.
Proceedings of the Genetic and Evolutionary Computation Conference, 2014

Excalibur: an autonomic cloud architecture for executing parallel applications.
Proceedings of the Fourth International Workshop on Cloud Data and Platforms, 2014

A Storage Policy for a Hybrid Federated Cloud platform: A Case Study for Bioinformatics.
Proceedings of the 14th IEEE/ACM International Symposium on Cluster, 2014

Storing provenance data of genome project workflows using graph database.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Genomic data persistency on a NoSQL database system.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013
Live Phylogeny.
J. Comput. Biol., 2013

Provenance in bioinformatics workflows.
BMC Bioinform., 2013


ncRNA-Agents: A Multiagent System for Non-coding RNA Annotation.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2013

Automatic capture of provenance data in genome project workflows.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

ACOsched: A scheduling algorithm in a federated cloud infrastructure for bioinformatics applications.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
A Bioconductor Based Workflow for Z-DNA Region Detection and Biological Inference.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2012

Task Scheduling in a Federated Cloud Infrastructure for Bioinformatics Applications.
Proceedings of the CLOSER 2012 - Proceedings of the 2nd International Conference on Cloud Computing and Services Science, Porto, Portugal, 18, 2012

Managing data provenance in genome project workflows.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

2011
kGC: Finding Groups of Homologous Genes across Multiple Genomes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2011

A Conceptual Model for Transcriptome High-Throughput Sequencing Pipeline.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2011

Regene: Automatic Construction of a Multiple Component Dirichlet Mixture Priors Covariance Model to Identify Non-coding RNA.
Proceedings of the Bioinformatics Research and Applications - 7th International Symposium, 2011

A Multi-agent Tool to Annotate Biological Sequences.
Proceedings of the ICAART 2011 - Proceedings of the 3rd International Conference on Agents and Artificial Intelligence, Volume 2, 2011


A conceptual data model for transcriptome project pipeline.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2010
Reinforcement Learning Method for BioAgents.
Proceedings of the 11th Brazilian Symposium on Neural Networks (SBRN 2010), 2010

2009
SOM-PORTRAIT: Identifying Non-coding RNAs Using Self-Organizing Maps.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2009

2008
Using BioAgentsfor Supporting Manual Annotation on Genome Sequencing Projects.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2008

Transposition Distance Based on the Algebraic Formalism.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2008

p2pBIOFOCO: Proposing a Peer-to-Peer System for Distributed BLAST Execution.
Proceedings of the 10th IEEE International Conference on High Performance Computing and Communications, 2008

2007
Parallel strategies for the local biological sequence alignment in a cluster of workstations.
J. Parallel Distributed Comput., 2007

A Method for Inferring Biological Functions Using Homologous Genes Among Three Genomes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2007

2005
Improving the algorithm of Bafna and Pevzner for the problem of sorting by transpositions: a practical approach.
J. Discrete Algorithms, 2005

A Method for Comparing Three Genomes.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2005

2004
Local DNA Sequence Alignment in a Cluster ofWorkstations: Algorithms and Tools.
J. Braz. Comput. Soc., 2004

An approximation algorithm for the problem of sorting by transversals.
Proceedings of the III Brazilian Workshop on Bioinformatics, 2004

Rede BIOFOCO: A distributed computation of Interpro Pfam, PROSITE and ProDom for protein annotation.
Proceedings of the III Brazilian Workshop on Bioinformatics, 2004

A program to visualize multiple alignments.
Proceedings of the III Brazilian Workshop on Bioinformatics, 2004

A Performance Evaluation of a Local DNA Sequence Alignment Algorithm on a Cluster of Workstations.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004

2003
Improving the algorithm of Bafna and Pevzner for the problem of sorting by transpositions.
Proceedings of the II Brazilian Workshop on Bioinformatics, 2003

Parallel DNA Sequence Alignment Using a DSM System in a Cluster of Workstations.
Proceedings of the Computational Science - ICCS 2003, 2003

Comparing Two Long Biological Sequences Using a DSM System.
Proceedings of the Euro-Par 2003. Parallel Processing, 2003

Working on the Problem of Sorting by Transpositions on Genome Rearrangements.
Proceedings of the Combinatorial Pattern Matching, 14th Annual Symposium, 2003

2002
A Lower Bound on the Reversal and Transposition Diameter.
J. Comput. Biol., 2002

2000
A New Approach for Approximating the Tranposition Distance.
Proceedings of the Seventh International Symposium on String Processing and Information Retrieval, 2000

1999
Algoritmos para problemas em rearranjos de genomas.
PhD thesis, 1999

1998
Reversal and Transposition Distance of Linear Chromosomes.
Proceedings of the String Processing and Information Retrieval: A South American Symposium, 1998


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