Marco Brandizi

According to our database, Marco Brandizi authored at least 16 papers between 2007 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2018

Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach.

Marco Brandizi, Ajit Singh, Christopher J. Rawlings, Keywan Hassani-Pak

J. Integr. Bioinform., 2018

Getting the best of Linked Data and Property Graphs: rdf2neo and the KnetMiner use case.

Marco Brandizi, Ajit Singh, Keywan Hassani-Pak

Proceedings of the 11th International Conference Semantic Web Applications and Tools for Life Sciences, 2018

2017

Orchestrating differential data access for translational research: a pilot implementation.

Marco Brandizi, Olga Melnichuk, Raffael Bild, Florian Kohlmayer, Benedicto Rodriguez-Castro, Helmut Spengler, Klaus A. Kuhn, Wolfgang Kuchinke, Christian Ohmann, Timo Mustonen, Mikael Linden, Tommi H. Nyrönen, Ilkka Lappalainen, Alvis Brazma, Ugis Sarkans

BMC Medical Informatics Decis. Mak., 2017

2015

ArrayExpress update - simplifying data submissions.

Nikolay Kolesnikov, Emma Hastings, Maria Keays, Olga Melnichuk, Y. Amy Tang, Eleanor Williams, Miroslaw Dylag, Natalja Kurbatova, Marco Brandizi, Tony Burdett, Karyn Megy, Ekaterina Pilicheva, Gabriella Rustici, Andrew Tikhonov, Helen E. Parkinson, Robert Petryszak, Ugis Sarkans, Alvis Brazma

Nucleic Acids Res., 2015

2014

Updates to BioSamples database at European Bioinformatics Institute.

Adam Faulconbridge, Tony Burdett, Marco Brandizi, Mikhail Gostev, Rui Pedro Pereira, Drashtti Vasant, Ugis Sarkans, Alvis Brazma, Helen E. Parkinson

Nucleic Acids Res., 2014

The EBI RDF platform: linked open data for the life sciences.

Simon Jupp, James Malone, Jerven T. Bolleman, Marco Brandizi, Mark Davies, Leyla J. García, Anna Gaulton, Sebastien Gehant, Camille Laibe, Nicole Redaschi, Sarala M. Wimalaratne, Maria Jesus Martin, Nicolas Le Novère, Helen E. Parkinson, Ewan Birney, Andrew M. Jenkinson

Bioinform., 2014

2013

ArrayExpress update - trends in database growth and links to data analysis tools.

Gabriella Rustici, Nikolay Kolesnikov, Marco Brandizi, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Jon C. Ison, Maria Keays, Natalja Kurbatova, James Malone, Roby Mani, Annalisa Mupo, Rui Pedro Pereira, Ekaterina Pilicheva, Johan Rung, Anjan Sharma, Y. Amy Tang, Tobias Ternent, Andrew Tikhonov, Danielle Welter, Eleanor Williams, Alvis Brazma, Helen E. Parkinson, Ugis Sarkans

Nucleic Acids Res., 2013

2012

The BioSample Database (BioSD) at the European Bioinformatics Institute.

Mikhail Gostev, Adam Faulconbridge, Marco Brandizi, Julio Fernandez-Banet, Ugis Sarkans, Alvis Brazma, Helen E. Parkinson

Nucleic Acids Res., 2012

graph2tab, a library to convert experimental workflow graphs into tabular formats.

Marco Brandizi, Natalja Kurbatova, Ugis Sarkans, Philippe Rocca-Serra

Bioinform., 2012

2011

ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments.

Helen E. Parkinson, Ugis Sarkans, Nikolay Kolesnikov, Niran Abeygunawardena, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Ele Holloway, Natalja Kurbatova, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici, Anjan Sharma, Eleanor Williams, Tomasz Adamusiak, Marco Brandizi, Nataliya Sklyar, Alvis Brazma

Nucleic Acids Res., 2011

Knowledge sharing and collaboration in translational research, and the DC-THERA Directory.

Andrea Splendiani, Michaela Gündel, Jonathan M. Austyn, Duccio Cavalieri, Ciro Scognamiglio, Marco Brandizi

Briefings Bioinform., 2011

2010

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level.

Philippe Rocca-Serra, Marco Brandizi, Eamonn Maguire, Nataliya Sklyar, Chris F. Taylor, Kimberly Begley, Dawn Field, Stephen C. Harris, Winston Hide, Oliver Hofmann, Steffen Neumann, Peter Sterk, Weida Tong, Susanna-Assunta Sansone

Bioinform., 2010

2009

ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression.

Helen E. Parkinson, Misha Kapushesky, Nikolay Kolesnikov, Gabriella Rustici, Mohammadreza Shojatalab, Niran Abeygunawardena, Hugo Bérubé, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Ibne Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Zheng Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna Guha Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma

Nucleic Acids Res., 2009

DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community.

Marco Brandizi, Michaela Gündel, Ciro Scognamiglio, Andrea Splendiani

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2009

2008

The DC-THERA Directory: A Knowledge Management System to Support Collaboration on Dendritic Cell and Immunology Research.

Michaela Gündel, Ciro Scognamiglio, Marco Brandizi, Andrea Splendiani

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008

2007

The Genopolis Microarray Database.

Andrea Splendiani, Marco Brandizi, Gael Even, Ottavio Beretta, Norman Pavelka, Mattia Pelizzola, Manuel Mayhaus, Maria Foti, Giancarlo Mauri, Paola Ricciardi-Castagnoli

BMC Bioinform., 2007