Marc Niethammer

According to our database1, Marc Niethammer authored at least 205 papers between 2002 and 2024.

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Bibliography

2024
CARES: A Comprehensive Benchmark of Trustworthiness in Medical Vision Language Models.
CoRR, 2024

CARL: A Framework for Equivariant Image Registration.
CoRR, 2024

NeuralOCT: Airway OCT Analysis via Neural Fields.
CoRR, 2024

MultiGradICON: A Foundation Model for Multimodal Medical Image Registration.
Proceedings of the Biomedical Image Registration - 11th International Workshop, 2024

Joint Depth Prediction and Semantic Segmentation with Multi-View SAM.
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2024

uniGradICON: A Foundation Model for Medical Image Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

A Unified Model for Longitudinal Multi-Modal Multi-View Prediction with Missingness.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

NAISR: A 3D Neural Additive Model for Interpretable Shape Representation.
Proceedings of the Twelfth International Conference on Learning Representations, 2024

NePhi: Neural Deformation Fields for Approximately Diffeomorphic Medical Image Registration.
Proceedings of the Computer Vision - ECCV 2024, 2024

Leveraging Near-Field Lighting for Monocular Depth Estimation from Endoscopy Videos.
Proceedings of the Computer Vision - ECCV 2024, 2024

Rethinking Interactive Image Segmentation with Low Latency, High Quality, and Diverse Prompts.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2024

2023
Optimal transport features for morphometric population analysis.
Medical Image Anal., 2023

SAME++: A Self-supervised Anatomical eMbeddings Enhanced medical image registration framework using stable sampling and regularized transformation.
CoRR, 2023

Multimodal Understanding Through Correlation Maximization and Minimization.
CoRR, 2023

Exploring Cycle Consistency Learning in Interactive Volume Segmentation.
CoRR, 2023

Unsupervised Discovery of 3D Hierarchical Structure with Generative Diffusion Features.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Inverse Consistency by Construction for Multistep Deep Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

MRIS: A Multi-modal Retrieval Approach for Image Synthesis on Diverse Modalities.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Self-supervised Landmark Learning with Deformation Reconstruction and Cross-Subject Consistency Objectives.
Proceedings of the Predictive Intelligence in Medicine - 6th International Workshop, 2023

Harmonization Benchmarking Tool for Neuroimaging Datasets.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

Continuously Parameterized Mixture Models.
Proceedings of the International Conference on Machine Learning, 2023

SimpleClick: Interactive Image Segmentation with Simple Vision Transformers.
Proceedings of the IEEE/CVF International Conference on Computer Vision, 2023

GradICON: Approximate Diffeomorphisms via Gradient Inverse Consistency.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022
The fairness-accuracy Pareto front.
Stat. Anal. Data Min., 2022

DADP: Dynamic abnormality detection and progression for longitudinal knee magnetic resonance images from the Osteoarthritis Initiative.
Medical Image Anal., 2022

GradICON: Approximate Diffeomorphisms via Gradient Inverse Consistency.
CoRR, 2022

On Measuring Excess Capacity in Neural Networks.
CoRR, 2022

A feature-based affine registration method for capturing background lung tissue deformation for ground glass nodule tracking.
Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2022

Compositional Generalization in Unsupervised Compositional Representation Learning: A Study on Disentanglement and Emergent Language.
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

On Measuring Excess Capacity in Neural Networks.
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

LiftReg: Limited Angle 2D/3D Deformable Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

iSegFormer: Interactive Segmentation via Transformers with Application to 3D Knee MR Images.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

PseudoClick: Interactive Image Segmentation with Click Imitation.
Proceedings of the Computer Vision - ECCV 2022, 2022

Deep Decomposition for Stochastic Normal-Abnormal Transport.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022

Aladdin: Joint Atlas Building and Diffeomorphic Registration Learning with Pairwise Alignment.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022

2021
Perfusion Imaging: An Advection Diffusion Approach.
IEEE Trans. Medical Imaging, 2021

Accurate Point Cloud Registration with Robust Optimal Transport.
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021

Votenet++: Registration Refinement For Multi-Atlas Segmentation.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Dissecting Supervised Constrastive Learning.
Proceedings of the 38th International Conference on Machine Learning, 2021

Robust and Generalizable Visual Representation Learning via Random Convolutions.
Proceedings of the 9th International Conference on Learning Representations, 2021

ICON: Learning Regular Maps Through Inverse Consistency.
Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

Local Temperature Scaling for Probability Calibration.
Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

Discovering Hidden Physics Behind Transport Dynamics.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2021

2020
Perfusion Imaging: A Data Assimilation Approach.
CoRR, 2020

Robust and Generalizable Visual Representation Learning via Random Convolutions.
CoRR, 2020

Deep Goal-Oriented Clustering.
CoRR, 2020

A shooting formulation of deep learning.
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

Fluid Registration Between Lung CT and Stationary Chest Tomosynthesis Images.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Anatomical Data Augmentation via Fluid-Based Image Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Automatic Optic Nerve Sheath Measurement in Point-of-Care Ultrasound.
Proceedings of the Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis, 2020

PIANO: Perfusion Imaging via Advection-Diffusion.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

A Deep Network for Joint Registration and Reconstruction of Images with Pathologies.
Proceedings of the Machine Learning in Medical Imaging - 11th International Workshop, 2020

Spatial Component Analysis to Mitigate Multiple Testing in Voxel-Based Analysis.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Votenet +: An Improved Deep Learning Label Fusion Method for Multi-Atlas Segmentation.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Graph Filtration Learning.
Proceedings of the 37th International Conference on Machine Learning, 2020

Topologically Densified Distributions.
Proceedings of the 37th International Conference on Machine Learning, 2020

Adversarial Data Augmentation via Deformation Statistics.
Proceedings of the Computer Vision - ECCV 2020, 2020

Deep Message Passing on Sets.
Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020

2019
Image-Based Methods for Phase Estimation, Gating, and Temporal Superresolution of Cardiac Ultrasound.
IEEE Trans. Biomed. Eng., 2019

Fast predictive simple geodesic regression.
Medical Image Anal., 2019

Learning Representations of Persistence Barcodes.
J. Mach. Learn. Res., 2019

Deep Multi-View Learning via Task-Optimal CCA.
CoRR, 2019

Graph Filtration Learning.
CoRR, 2019

Stochastic block models with multiple continuous attributes.
Appl. Netw. Sci., 2019

Region-specific Diffeomorphic Metric Mapping.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019

DeepAtlas: Joint Semi-supervised Learning of Image Registration and Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

VoteNet: A Deep Learning Label Fusion Method for Multi-atlas Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Multiseg pipeline: automatic tissue segmentation of brain MR images with subject-specific atlases.
Proceedings of the Medical Imaging 2019: Biomedical Applications in Molecular, 2019

Connectivity-Optimized Representation Learning via Persistent Homology.
Proceedings of the 36th International Conference on Machine Learning, 2019

Networks for Joint Affine and Non-Parametric Image Registration.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2019

Metric Learning for Image Registration.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2019

2018
Brain extraction from normal and pathological images: A joint PCA/Image-Reconstruction approach.
NeuroImage, 2018

Testing Alignment of Node Attributes with Network Structure Through Label Propagation.
CoRR, 2018

Contextual Additive Networks to Efficiently Boost 3D Image Segmentations.
Proceedings of the Deep Learning in Medical Image Analysis - and - Multimodal Learning for Clinical Decision Support, 2018

Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2018

Exploratory Population Analysis with Unbalanced Optimal Transport.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Multiple Instance Learning for Heterogeneous Images: Training a CNN for Histopathology.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Scoliosis screening and monitoring using self contained ultrasound and neural networks.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

Automatic Multi-Atlas Segmentation for Abdominal Images Using Template Construction and Robust Principal Component Analysis.
Proceedings of the 24th International Conference on Pattern Recognition, 2018

2017
Active Mean Fields for Probabilistic Image Segmentation: Connections with Chan-Vese and Rudin-Osher-Fatemi Models.
SIAM J. Imaging Sci., 2017

Quicksilver: Fast predictive image registration - A deep learning approach.
NeuroImage, 2017

Brain Extraction from Normal and Pathological Images: A Joint PCA/Image-Reconstruction Approach.
CoRR, 2017

Quicksilver: Fast Predictive Image Registration - a Deep Learning Approach.
CoRR, 2017

Compressing networks with super nodes.
CoRR, 2017

Deep Learning with Topological Signatures.
Proceedings of the Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 2017

Fast predictive multimodal image registration.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

Efficient registration of pathological images: A joint PCA/image-reconstruction approach.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

Orthotropic Thin Shell Elasticity Estimation for Surface Registration.
Proceedings of the Information Processing in Medical Imaging, 2017

Constructing Shape Spaces from a Topological Perspective.
Proceedings of the Information Processing in Medical Imaging, 2017

AGA: Attribute-Guided Augmentation.
Proceedings of the 2017 IEEE Conference on Computer Vision and Pattern Recognition, 2017

Regression Uncertainty on the Grassmannian.
Proceedings of the 20th International Conference on Artificial Intelligence and Statistics, 2017

2016
Parametric Regression on the Grassmannian.
IEEE Trans. Pattern Anal. Mach. Intell., 2016

The Endoscopogram: A 3D Model Reconstructed from Endoscopic Video Frames.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Fast Predictive Image Registration.
Proceedings of the Deep Learning and Data Labeling for Medical Applications, 2016

Registration of Pathological Images.
Proceedings of the Simulation and Synthesis in Medical Imaging, 2016

Memory Efficient LDDMM for Lung CT.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Ultrasound spectroscopy.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

One-Shot Learning of Scene Locations via Feature Trajectory Transfer.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition, 2016

Registration of Developmental Image Sequences with Missing Data.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016

2015
Diseased Region Detection of Longitudinal Knee Magnetic Resonance Imaging Data.
IEEE Trans. Medical Imaging, 2015

Splines for diffeomorphisms.
Medical Image Anal., 2015

Shape analysis based on depth-ordering.
Medical Image Anal., 2015

Scene Parsing with Object Instance Inference Using Regions and Per-exemplar Detectors.
Int. J. Comput. Vis., 2015

Appearance normalization of histology slides.
Comput. Medical Imaging Graph., 2015

Statistical Topological Data Analysis - A Kernel Perspective.
Proceedings of the Advances in Neural Information Processing Systems 28: Annual Conference on Neural Information Processing Systems 2015, 2015

Surface Registration in the Presence of Missing Patches and Topology Change.
Proceedings of the Medical Image Understanding and Analysis, 2015

Uncertainty Quantification for LDDMM Using a Low-Rank Hessian Approximation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

Model Criticism for Regression on the Grassmannian.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015

Hierarchical task-driven feature learning for tumor histology.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Semi-coupled dictionary learning for deformation prediction.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Group Testing for Longitudinal Data.
Proceedings of the Information Processing in Medical Imaging, 2015

2014
PORTR: Pre-Operative and Post-Recurrence Brain Tumor Registration.
IEEE Trans. Medical Imaging, 2014

Large deformation diffeomorphic registration of diffusion-weighted imaging data.
Medical Image Anal., 2014

Automatic atlas-based three-label cartilage segmentation from MR knee images.
Medical Image Anal., 2014

Statistical atlas construction via weighted functional boxplots.
Medical Image Anal., 2014

Multi-modal registration for correlative microscopy using image analogies.
Medical Image Anal., 2014

Multi-modal Image Registration for Correlative Microscopy.
CoRR, 2014

Probabilistic Diffeomorphic Registration: Representing Uncertainty.
Proceedings of the Biomedical Image Registration - 6th International Workshop, 2014

Geometric-Feature-Based Spectral Graph Matching in Pharyngeal Surface Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Splines for Diffeomorphic Image Regression.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Topological Descriptors of Histology Images.
Proceedings of the Machine Learning in Medical Imaging - 5th International Workshop, 2014

Low-Rank to the Rescue - Atlas-Based Analyses in the Presence of Pathologies.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Time-Warped Geodesic Regression.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Depth-Based Shape-Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Geodesic Regression on the Grassmannian.
Proceedings of the Computer Vision - ECCV 2014, 2014

Scene Parsing with Object Instances and Occlusion Ordering.
Proceedings of the 2014 IEEE Conference on Computer Vision and Pattern Recognition, 2014

2013
A Locally Adaptive Regularization Based on Anisotropic Diffusion for Deformable Image Registration of Sliding Organs.
IEEE Trans. Medical Imaging, 2013

Longitudinal Image Registration With Temporally-Dependent Image Similarity Measure.
IEEE Trans. Medical Imaging, 2013

Segmentation with area constraints.
Medical Image Anal., 2013

Cortical correspondence via sulcal curve-constrained spherical registration with application to Macaque studies.
Proceedings of the Medical Imaging 2013: Image Processing, 2013

Large Deformation Image Classification Using Generalized Locality-Constrained Linear Coding.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Large Deformation Diffeomorphic Registration of Diffusion-Weighted Images with Explicit Orientation Optimization.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Diffusion Propagator Estimation Using Radial Basis Functions.
Proceedings of the Computational Diffusion MRI and Brain Connectivity, 2013

Sparse Scale-Space Decomposition of Volume Changes in Deformations Fields.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Studying Cerebral Vasculature Using Structure Proximity and Graph Kernels.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Weighted Functional Boxplot with Application to Statistical Atlas Construction.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Robust Multimodal Dictionary Learning.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Longitudinal three-label segmentation of knee cartilage.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

A pediatric airway atlas and its application in subglottic stenosis.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Group-Wise Cortical Correspondence via Sulcal Curve-Constrained Entropy Minimization.
Proceedings of the Information Processing in Medical Imaging, 2013

Diseased Region Detection of Longitudinal Knee MRI Data.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
Simulation-Based Joint Estimation of Body Deformation and Elasticity Parameters for Medical Image Analysis.
IEEE Trans. Medical Imaging, 2012

Simple Geodesic Regression for Image Time-Series.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

Temporally-Dependent Image Similarity Measure for Longitudinal Analysis.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

Registration for Correlative Microscopy Using Image Analogies.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

Automatic atlas-based three-label cartilage segmentation from MR knee images.
Proceedings of the 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, 2012

Large Deformation Diffeomorphic Registration of Diffusion-Weighted Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Metamorphic Geodesic Regression.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Longitudinal Image Registration with Non-uniform Appearance Change.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Automatic multi-atlas-based cartilage segmentation from knee MR images.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

LQG-obstacles: Feedback control with collision avoidance for mobile robots with motion and sensing uncertainty.
Proceedings of the IEEE International Conference on Robotics and Automation, 2012

2011
An Optimal Control Approach for Texture Metamorphosis.
Comput. Graph. Forum, 2011

Group-wise automatic mesh-based analysis of cortical thickness.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

An automated pipeline for cortical surface generation and registration of the cerebral cortex.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

Automatic cortical thickness analysis on rodent brain.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

Sliding Geometries in Deformable Image Registration.
Proceedings of the Abdominal Imaging. Computational and Clinical Applications, 2011

Geodesic Regression for Image Time-Series.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Geometric Metamorphosis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Deformable image registration of sliding organs using anisotropic diffusive regularization.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

2010
Attenuation Analysis of Lamb Waves Using the Chirplet Transform.
EURASIP J. Adv. Signal Process., 2010

Automatic bone segmentation and alignment from MR knee images.
Proceedings of the Medical Imaging 2010: Image Processing, 2010

User-driven 3D mesh region targeting.
Proceedings of the Medical Imaging 2010: Visualization, 2010

Appearance Normalization of Histology Slides.
Proceedings of the Machine Learning in Medical Imaging, First International Workshop, 2010

DTI Connectivity by Segmentation.
Proceedings of the Medical Imaging and Augmented Reality - 5th International Workshop, 2010

Automatic three-label bone segmentation from knee MR images.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Physically-based deformable image registration with material property and boundary condition estimation.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

2009
Quantitative examination of a novel clustering method using magnetic resonance diffusion tensor tractography.
NeuroImage, 2009

Near-tubular fiber bundle segmentation for diffusion weighted imaging: Segmentation through frame reorientation.
NeuroImage, 2009

Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging.
NeuroImage, 2009

Laplace-Beltrami eigenvalues and topological features of eigenfunctions for statistical shape analysis.
Comput. Aided Des., 2009

A Method for Normalizing Histology Slides for Quantitative Analysis.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

Cortical Correspondence with Probabilistic Fiber Connectivity.
Proceedings of the Information Processing in Medical Imaging, 2009

Globally Optimal Finsler Active Contours.
Proceedings of the Pattern Recognition, 2009

Continuous maximal flows and Wulff shapes: Application to MRFs.
Proceedings of the 2009 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2009), 2009

An optimal control approach for deformable registration.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2009

An optimal control approach for the registration of image time-series.
Proceedings of the 48th IEEE Conference on Decision and Control, 2009

2008
Restoration of DWI Data Using a Rician LMMSE Estimator.
IEEE Trans. Medical Imaging, 2008

Knowledge-Based Segmentation for Tracking Through Deep Turbulence.
IEEE Trans. Control. Syst. Technol., 2008

Geometric Observers for Dynamically Evolving Curves.
IEEE Trans. Pattern Anal. Mach. Intell., 2008

Fast Global Labeling for Real-Time Stereo Using Multiple Plane Sweeps.
Proceedings of the 13th International Fall Workshop on Vision, Modeling, and Visualization, 2008

Segmenting images analytically in shape space.
Proceedings of the Medical Imaging 2008: Image Processing, 2008

2007
A variational segmentation framework using active contours and thresholding.
Proceedings of the Signal and Image Processing (SIP 2007), 2007

Global Medical Shape Analysis Using the Laplace-Beltrami Spectrum.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Outlier Rejection for Diffusion Weighted Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Finsler Tractography for White Matter Connectivity Analysis of the Cingulum Bundle.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Geodesic-Loxodromes for Diffusion Tensor Interpolation and Difference Measurement.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Statistical Shape Analysis of Brain Structures Using Spherical Wavelets.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

Locally-Constrained Region-Based Methods for DW-MRI Segmentation.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

Global Medical Shape Analysis Using the Volumetric Laplace Spectrum.
Proceedings of the 2007 International Conference on Cyberworlds, 2007

Finsler Level Set Segmentation for Imagery in Oriented Domains.
Proceedings of the British Machine Vision Conference 2007, 2007

A Variational Framework Combining Level-sets and Thresholding.
Proceedings of the British Machine Vision Conference 2007, 2007

2006
On the detection of simple points in higher dimensions using cubical homology.
IEEE Trans. Image Process., 2006

Dynamic active contours for visual tracking.
IEEE Trans. Autom. Control., 2006

A Laplace equation approach for shape comparison.
Proceedings of the Medical Imaging 2006: Visualization, 2006

Fiber Bundle Estimation and Parameterization.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

On diffusion tensor estimation.
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006

2005
On the Evolution of Vector Distance Functions of Closed Curves.
Int. J. Comput. Vis., 2005

2004
Dynamic Level Sets for Visual Tracking.
PhD thesis, 2004

Area-Based Medial Axis of Planar Curves.
Int. J. Comput. Vis., 2004

Dynamic Geodesic Snakes for Visual Tracking.
Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2004), with CD-ROM, 27 June, 2004

Active contours and optical flow for automatic tracking of flying vehicles.
Proceedings of the 2004 American Control Conference, 2004

2003
Color histogram equalization through mesh deformation.
Proceedings of the 2003 International Conference on Image Processing, 2003

A stokes flow boundary integral measurement of tubular structure cross sections in two dimensions.
Proceedings of the 2003 International Conference on Image Processing, 2003

Dynamic level sets for visual tracking.
Proceedings of the 42nd IEEE Conference on Decision and Control, 2003

2002
Analysis of blood vessel topology by cubical homology.
Proceedings of the 2002 International Conference on Image Processing, 2002


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