Malgorzata Kotulska

According to our database, Malgorzata Kotulska authored at least 17 papers between 2008 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

AmyloGraph: a comprehensive database of amyloid-amyloid interactions.

Michal Burdukiewicz, Dominik Rafacz, Agnieszka Barbach, Katarzyna Hubicka, Laura Bakala, Anna Lassota, Jakub Stecko, Natalia Szymanska, Jakub Wojciechowski, Dominika Kozakiewicz, Natalia Szulc, Jaroslaw Chilimoniuk, Izabela Jeskowiak, Marlena Gasior-Glogowska, Malgorzata Kotulska

Nucleic Acids Res., January, 2023

2022

Topological analysis as a tool for detection of abnormalities in protein-protein interaction data.

Alicja W. Nowakowska, Malgorzata Kotulska

Bioinform., 2022

2018

Bio-knowledge-based filters improve residue-residue contact prediction accuracy.

Pawel P. Wozniak, J. Pelc, M. Skrzypecki, Gert Vriend, Malgorzata Kotulska

Bioinform., 2018

2017

Correlated mutations select misfolded from properly folded proteins.

Pawel P. Wozniak, Gert Vriend, Malgorzata Kotulska

Bioinform., 2017

Forecasting residue-residue contact prediction accuracy.

Pawel P. Wozniak, Bogumil Konopka, J. Xu, Gert Vriend, Malgorzata Kotulska

Bioinform., 2017

2016

Database of Peptides Susceptible to Aggregation as a Tool for Studying Mechanisms of Diseases of Civilization.

Pawel P. Wozniak, Jean-Christophe Nebel, Malgorzata Kotulska

Proceedings of the Intelligent Information and Database Systems - 8th Asian Conference, 2016

2015

AmyLoad: website dedicated to amyloidogenic protein fragments.

Pawel P. Wozniak, Malgorzata Kotulska

Bioinform., 2015

Automated Analysis of Images from Confocal Laser Scanning Microscopy Applied to Observation of Calcium Channel Subunits in Nerve Cell Model Line Subjected Electroporation and Calcium.

Julita Kulbacka, Marek Kulbacki, Jakub Segen, Anna Choromanska, Jolanta Saczko, Magda Dubinska-Magiera, Malgorzata Kotulska

Proceedings of the Intelligent Information and Database Systems - 7th Asian Conference, 2015

2014

Evaluating the Significance of Protein Functional Similarity Based on Gene Ontology.

Bogumil Konopka, Tomasz Golda, Malgorzata Kotulska

J. Comput. Biol., 2014

FISH Amyloid - a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids.

Pawel Gasior, Malgorzata Kotulska

BMC Bioinform., 2014

2013

Machine learning methods can replace 3D profile method in classification of amyloidogenic hexapeptides.

Jerzy Stanislawski, Malgorzata Kotulska, Olgierd Unold

BMC Bioinform., 2013

On the amyloid datasets used for training PAFIG - how (not) to extend the experimental dataset of hexapeptides.

Malgorzata Kotulska, Olgierd Unold

BMC Bioinform., 2013

Probabilistic grammatical model for helix-helix contact site classification.

Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska

Algorithms Mol. Biol., 2013

2012

Quality assessment of protein model-structures based on structural and functional similarities.

Bogumil Konopka, Jean-Christophe Nebel, Malgorzata Kotulska

BMC Bioinform., 2012

2010

Towards 3D Modeling of Interacting TM Helix Pairs Based on Classification of Helix Pair Sequence.

Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska

Proceedings of the Pattern Recognition in Bioinformatics, 2010

2009

Accuracy in Predicting Secondary Structure of Ionic Channels.

Bogumil Konopka, Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska

Proceedings of the New Challenges in Computational Collective Intelligence [selected papers from the 1st International Conference on Collective Intelligence, 2009

2008

Ion flux through membrane channels - An enhanced algorithm for the Poisson-Nernst-Planck model.

Witold Dyrka, Andy T. Augousti, Malgorzata Kotulska

J. Comput. Chem., 2008