Maciej Rybinski

According to our database, Maciej Rybinski authored at least 30 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Learning to match patients to clinical trials using large language models.

Maciej Rybinski, Wojciech Kusa, Sarvnaz Karimi, Allan Hanbury

J. Biomed. Informatics, 2024

An adaptive approach to noisy annotations in scientific information extraction.

Necva Bölücü, Maciej Rybinski, Xiang Dai, Stephen Wan

Inf. Process. Manag., 2024

2023

KNIT: Ontology reusability through knowledge graph exploration.

Jorge Rodríguez-Revello, Cristóbal Barba-González, Maciej Rybinski, Ismael Navas-Delgado

Expert Syst. Appl., October, 2023

Matching of Patient Questionnaires to Clinical Trials with Large Language Models.

Maciej Rybinski, Sarvnaz Karimi

Proceedings of the Thirty-Second Text REtrieval Conference Proceedings (TREC 2023), 2023

SciHarvester: Searching Scientific Documents for Numerical Values.

Maciej Rybinski, Stephen Wan, Sarvnaz Karimi, Cécile Paris, Brian Jin, Neil I. Huth, Peter J. Thorburn, Dean P. Holzworth

Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2023

MedRedQA for Medical Consumer Question Answering: Dataset, Tasks, and Neural Baselines.

Vincent Nguyen, Sarvnaz Karimi, Maciej Rybinski, Zhenchang Xing

Proceedings of the 13th International Joint Conference on Natural Language Processing and the 3rd Conference of the Asia-Pacific Chapter of the Association for Computational Linguistics, 2023

impact of sample selection on in-context learning for entity extraction from scientific writing.

Necva Bölücü, Maciej Rybinski, Stephen Wan

Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2023, 2023

A Self-Learning Resource-Efficient Re-Ranking Method for Clinical Trials Search.

Maciej Rybinski, Vincent Nguyen, Sarvnaz Karimi

Proceedings of the 32nd ACM International Conference on Information and Knowledge Management, 2023

CSIRO Data61 Team at BioLaySumm Task 1: Lay Summarisation of Biomedical Research Articles Using Generative Models.

Mong Yuan Sim, Xiang Dai, Maciej Rybinski, Sarvnaz Karimi

Proceedings of the 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, 2023

2022

Search like an expert: Reducing expertise disparity using a hybrid neural index for COVID-19 queries.

Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi, Zhenchang Xing

J. Biomed. Informatics, 2022

Matching a Patient from An Admission Note to Clinical Trials: Experiments with Query Generation and Neural-Ranking.

Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi

Proceedings of the Thirty-First Text REtrieval Conference, 2022

A2A-API: A Prototype for Biomedical Information Retrieval Research and Benchmarking.

Maciej Rybinski, Liam Watts, Sarvnaz Karimi

Proceedings of the SIGIR '22: The 45th International ACM SIGIR Conference on Research and Development in Information Retrieval, Madrid, Spain, July 11, 2022

2021

CSIROmed Team Report of TREC 2021 Clinical Trials track: Experiments with BERT Reranking Methods.

Maciej Rybinski, Vincent Nguyen, Sarvnaz Karimi

Proceedings of the Thirtieth Text REtrieval Conference, 2021

Science2Cure: A Clinical Trial Search Prototype.

Maciej Rybinski, Sarvnaz Karimi, Aleney Khoo

Proceedings of the SIGIR '21: The 44th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2021

Query-Focused Extractive Summarisation for Finding Ideal Answers to Biomedical and COVID-19 Questions.

Diego Mollá, Urvashi Khanna, Dima Galat, Vincent Nguyen, Maciej Rybinski

Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

Will Sorafenib Help?: Treatment-aware Reranking in Precision Medicine Search.

Maciej Rybinski, Sarvnaz Karimi

Proceedings of the CIKM '21: The 30th ACM International Conference on Information and Knowledge Management, Virtual Event, Queensland, Australia, November 1, 2021

SearchEHR: A Family History Search System for Clinical Decision Support.

Xiang Dai, Maciej Rybinski, Sarvnaz Karimi

Proceedings of the CIKM '21: The 30th ACM International Conference on Information and Knowledge Management, Virtual Event, Queensland, Australia, November 1, 2021

2020

Clinical trial search: Using biomedical language understanding models for re-ranking.

Maciej Rybinski, Jerry Xu, Sarvnaz Karimi

J. Biomed. Informatics, 2020

Searching Scientific Literature for Answers on COVID-19 Questions.

Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi, Zhenchang Xing

CoRR, 2020

A2A: a platform for research in biomedical literature search.

Maciej Rybinski, Sarvnaz Karimi, Vincent Nguyen, Cécile Paris

BMC Bioinform., 2020

CSIROmed at TREC Precision Medicine 2020.

Maciej Rybinski, Sarvnaz Karimi

Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020

2019

VIGLA-M: visual gene expression data analytics.

Ismael Navas-Delgado, José García-Nieto, Esteban López-Camacho, Maciej Rybinski, Rocio Lavado-Valenzuela, Miguel Ángel Berciano Guerrero, José Francisco Aldana Montes

BMC Bioinform., 2019

CSIRO at 2019 TREC Precision Medicine Track.

Maciej Rybinski, Sarvnaz Karimi, Cécile Paris

Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

2018

Introducing the HOBBIT platform into the ontology alignment evaluation campaign.

Ernesto Jiménez-Ruiz, Tzanina Saveta, Ondrej Zamazal, Sven Hertling, Michael Röder, Irini Fundulaki, Axel-Cyrille Ngonga Ngomo, Mohamed Ahmed Sherif, Amina Annane, Zohra Bellahsene, Sadok Ben Yahia, Gayo Diallo, Daniel Faria, Marouen Kachroudi, Abderrahmane Khiat, Patrick Lambrix, Huanyu Li, Maximilian Mackeprang, Majid Mohammadi, Maciej Rybinski, Booma Sowkarthiga Balasubramani, Cássia Trojahn

Proceedings of the 13th International Workshop on Ontology Matching co-located with the 17th International Semantic Web Conference, 2018

On the Design and Tuning of Machine Learning Models for Language Toxicity Classification in Online Platforms.

Maciej Rybinski, William Miller, Javier Del Ser, Miren Nekane Bilbao, José Francisco Aldana Montes

Proceedings of the Intelligent Distributed Computing XII, 2018

2017

DomESA: a novel approach for extending domain-oriented lexical relatedness calculations with domain-specific semantics.

Maciej Rybinski, José Francisco Aldana Montes

J. Intell. Inf. Syst., 2017

2016

tESA: a distributional measure for calculating semantic relatedness.

Maciej Rybinski, José Francisco Aldana Montes

J. Biomed. Semant., 2016

DisMatch results for OAEI 2016.

Maciej Rybinski, María del Mar Roldán García, José García-Nieto, José Francisco Aldana Montes

Proceedings of the 11th International Workshop on Ontology Matching co-located with the 15th International Semantic Web Conference (ISWC 2016), 2016

2015

kpath: integration of metabolic pathway linked data.

Ismael Navas-Delgado, María Jesús García-Godoy, Esteban López-Camacho, Maciej Rybinski, Armando Reyes-Palomares, Miguel Angel Medina, José Francisco Aldana Montes

Database J. Biol. Databases Curation, 2015

2014

Calculating semantic relatedness for biomedical use in a knowledge-poor environment.

Maciej Rybinski, José Francisco Aldana Montes

BMC Bioinform., 2014