M. Stanley Fujimoto

According to our database, M. Stanley Fujimoto authored at least 16 papers between 2013 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Active Transfer Learning for Handwriting Recognition.

Eric Burdett, Stanley Fujimoto, Timothy Brown, Ammon Shurtz, Daniel Segrera, Lawry Sorenson, Mark J. Clement, Joseph Price

Proceedings of the Frontiers in Handwriting Recognition - 18th International Conference, 2022

2021

BART for Post-Correction of OCR Newspaper Text.

Elizabeth Soper, Stanley Fujimoto, Yen-Yun Yu

Proceedings of the Seventh Workshop on Noisy User-generated Text, 2021

2020

Kcollections: A Fast and Efficient Library for K-mers.

M. Stanley Fujimoto, Cole A. Lyman, Mark J. Clement

Proceedings of the 2020 IEEE International Parallel and Distributed Processing Symposium Workshops, 2020

2018

The PepSeq Pipeline: Software for Antimicrobial Motif Discovery in Randomly-Generated Peptide Libraries.

Tanner D. Jensen, Kristi A. Bresciano, Emma Dallon, M. Stanley Fujimoto, Cole A. Lyman, Enoch Stewart, Joel Griffitts, Mark J. Clement

Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

2017

The OGCleaner: filtering false-positive homology clusters.

M. Stanley Fujimoto, Anton Suvorov, Nicholas O. Jensen, Mark J. Clement, Quinn Snell, Seth M. Bybee

Bioinform., 2017

Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs.

Cole A. Lyman, M. Stanley Fujimoto, Anton Suvorov, Paul M. Bodily, Quinn Snell, Keith A. Crandall, Seth M. Bybee, Mark J. Clement

Proceedings of the 17th IEEE International Conference on Bioinformatics and Bioengineering, 2017

Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction.

M. Stanley Fujimoto, Cole A. Lyman, Anton Suvorov, Paul M. Bodily, Quinn Snell, Keith A. Crandall, Seth M. Bybee, Mark J. Clement

Proceedings of the 17th IEEE International Conference on Bioinformatics and Bioengineering, 2017

Modeling Global and local Codon Bias with Deep Language Models.

Masaki Stanley Fujimoto, Paul M. Bodily, Cole A. Lyman, Andrew J. Jacobsen, Quinn Snell, Mark J. Clement

Proceedings of the 17th IEEE International Conference on Bioinformatics and Bioengineering, 2017

2016

Detecting false positive sequence homology: a machine learning approach.

M. Stanley Fujimoto, Anton Suvorov, Nicholas O. Jensen, Mark J. Clement, Seth M. Bybee

BMC Bioinform., 2016

A novel approach for multi-SNP GWAS and its application in Alzheimer's disease.

Paul M. Bodily, M. Stanley Fujimoto, Justin T. Page, Mark J. Clement, Mark T. W. Ebbert, Perry G. Ridge

BMC Bioinform., 2016

ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction.

Paul M. Bodily, M. Stanley Fujimoto, Quinn Snell, Dan Ventura, Mark J. Clement

Bioinform., 2016

2015

Heterozygous genome assembly via binary classification of homologous sequence.

Paul M. Bodily, M. Stanley Fujimoto, Cameron Ortega, Nozomu Okuda, Jared C. Price, Mark J. Clement, Quinn Snell

BMC Bioinform., 2015

2014

Effects of error-correction of heterozygous next-generation sequencing data.

M. Stanley Fujimoto, Paul M. Bodily, Nozomu Okuda, Mark J. Clement, Quinn Snell

BMC Bioinform., 2014

A structured approach to ensemble learning for Alzheimer's disease prediction.

Matthew Seeley, Mark J. Clement, Christophe G. Giraud-Carrier, Quinn Snell, Paul M. Bodily, Stanley Fujimoto

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

Haplotype-centered mapping for improved alignments and genetic association studies.

Paul M. Bodily, Mark J. Clement, Quinn Snell, M. Stanley Fujimoto, Perry G. Ridge

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2013

Application of a MAX-CUT Heuristic to the Contig Orientation Problem in Genome Assembly.

Paul M. Bodily, Mark J. Clement, Quinn Snell, Jared C. Price, Stanley Fujimoto, Nozomu Okuda

Proceedings of the ACM Conference on Bioinformatics, 2013