Luis Rueda

Orcid: 0000-0001-7988-2058

Affiliations:
  • University of Windsor, ON, Canada
  • University of Concepción, Chile (former)
  • Carleton University, Ottawa, ON, Canada (PhD 2002)


According to our database1, Luis Rueda authored at least 146 papers between 2000 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2024
Hyperedge Modeling in Hypergraph Neural Networks by using Densest Overlapping Subgraphs.
CoRR, 2024

Improving Out-of-Distribution Data Handling and Corruption Resistance via Modern Hopfield Networks.
CoRR, 2024

Lusifer: LLM-based User SImulated Feedback Environment for online Recommender systems.
CoRR, 2024

PPPCT: Privacy-Preserving framework for Parallel Clustering Transcriptomics data.
Comput. Biol. Medicine, 2024

SEGCECO: Subgraph Embedding of Gene expression matrix for prediction of CEll-cell COmmunication.
Briefings Bioinform., 2024

GPD-Nodule: A Lightweight Lung Nodule Detection and Segmentation Framework on Computed Tomography Images Using Uniform Superpixel Generation.
IEEE Access, 2024

Harnessing the Power of Graph Propagation in Lung Nodule Detection.
Proceedings of the Artificial Intelligence in Medicine - 22nd International Conference, 2024

2023
Robust Emotion Recognition in EEG Signals Based on a Combination of Multiple Domain Adaptation Techniques.
Proceedings of the IEEE International Conference on Systems, Man, and Cybernetics, 2023

Lung Nodule Segmentation on CT Scan Images Using Patchwise Iterative Graph Clustering.
Proceedings of the IEEE International Symposium on Circuits and Systems, 2023

Examining the Performance of Melanoma Classification using Superpixel Segmentation: A Comparative Analysis.
Proceedings of the International Conference on Microelectronics, 2023

2022
Identification of Enriched Regions in ChIP-Seq Data via a Linear-Time Multi-Level Thresholding Algorithm.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Guest editorial: Deep neural networks for precision medicine.
Neurocomputing, 2022

Computationally repurposing drugs for breast cancer subtypes using a network-based approach.
BMC Bioinform., 2022

Comparative Analysis of Supervised Cell Type Detection in Single-Cell RNA-seq Data.
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

Heart Disease Prediction Using Adaptive Infinite Feature Selection and Deep Neural Networks.
Proceedings of the 2022 International Conference on Artificial Intelligence in Information and Communication, 2022

DeePSLiM: A Deep Learning Approach to Identify Predictive Short-linear Motifs for Protein Sequence Classification.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2022

NICASN: Non-negative Matrix Factorization and Independent Component Analysis for Clustering Social Networks.
Proceedings of the 35th Canadian Conference on Artificial Intelligence, Toronto, Ontario, 2022

2021
Spam review detection using self-organizing maps and convolutional neural networks.
Comput. Secur., 2021

2020
A novel approach to identify subtype-specific network biomarkers of breast cancer survivability.
Netw. Model. Anal. Health Informatics Bioinform., 2020

iSOM-GSN: an integrative approach for transforming multi-omic data into gene similarity networks via self-organizing maps.
Bioinform., 2020

Cancer Detection Based on Image Classification by Using Convolution Neural Network.
Proceedings of the Bioinformatics and Biomedical Engineering, 2020

A Data Integration Approach for Detecting Biomarkers of Breast Cancer Survivability.
Proceedings of the Bioinformatics and Biomedical Engineering, 2020

Unsupervised Identification of SARS-CoV-2 Target Cell Groups via Nonlinear Dimensionality Reduction on Single-cell RNA-Seq Data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019
A Gene-disease-based Machine Learning Approach to Identify Prostate Cancer Biomarkers.
Proceedings of the 10th ACM International Conference on Bioinformatics, 2019

A Deep Learning Model to Identify a Genomic Signature Driving Sporadic Colorectal Cancer in Young Adults.
Proceedings of the 10th ACM International Conference on Bioinformatics, 2019

2018
The predictive performance of short-linear motif features in the prediction of calmodulin-binding proteins.
BMC Bioinform., 2018

Identification of the Treatment Survivability Gene Biomarkers of Breast Cancer Patients via a Tree-Based Approach.
Proceedings of the Bioinformatics and Biomedical Engineering, 2018

Predicting Tumor Locations in Prostate Cancer Tissue Using Gene Expression.
Proceedings of the Bioinformatics and Biomedical Engineering, 2018

Identifying suutype specific network-Uiomarkers of breast cancer survivauility.
Proceedings of the 2018 International Joint Conference on Neural Networks, 2018

Identification of User Behavioral Biometrics for Authentication Using Keystroke Dynamics and Machine Learning.
Proceedings of the 2018 2nd International Conference on Biometric Engineering and Applications, 2018

2017
An Integrative Approach for Identifying Network Biomarkers of Breast Cancer Subtypes Using Genomic, Interactomic, and Transcriptomic Data.
J. Comput. Biol., 2017

Zseq: An Approach for Preprocessing Next-Generation Sequencing Data.
J. Comput. Biol., 2017

Prediction of Calmodulin-Binding Proteins Using Short-Linear Motifs.
Proceedings of the Bioinformatics and Biomedical Engineering, 2017

Finding Transcripts Associated with Prostate Cancer Gleason Stages Using Next Generation Sequencing and Machine Learning Techniques.
Proceedings of the Bioinformatics and Biomedical Engineering, 2017

A Hybrid Scheme for Fault Diagnosis with Partially Labeled Sets of Observations.
Proceedings of the 16th IEEE International Conference on Machine Learning and Applications, 2017

Multi-class heteroscedastic linear dimensionality reduction scheme for diagnosing process faults.
Proceedings of the 30th IEEE Canadian Conference on Electrical and Computer Engineering, 2017

Outlier Genes as Biomarkers of Breast Cancer Survivability in Time-Series Data.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

Predicting Breast Cancer Outcome under Different Treatments by Feature Selection Approaches.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016
A novel model used to detect differential splice junctions as biomarkers in prostate cancer from RNA-Seq data.
J. Biomed. Informatics, 2016

Predicting Outcomes of Hormone and Chemotherapy in the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) Study by Biochemically-inspired Machine Learning.
F1000Research, 2016

PAFS - An efficient method for classifier-specific feature selection.
Proceedings of the 2016 IEEE Symposium Series on Computational Intelligence, 2016

Efficient feature extraction of vibration signals for diagnosing bearing defects in induction motors.
Proceedings of the 2016 International Joint Conference on Neural Networks, 2016

A new feature selection approach for optimizing prediction models, applied to breast cancer subtype classification.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

Identification of discriminative genes for predicting breast cancer subtypes.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

A Machine Learning Model for Discovery of Protein Isoforms as Biomarkers.
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016

2015
Pattern classification using a new border identification paradigm: The nearest border technique.
Neurocomputing, 2015

A Computational Domain-Based Feature Grouping Approach for Prediction of Stability of SCF Ligases.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Identifying differentially expressed transcripts associated with prostate cancer progression using RNA-Seq and machine learning techniques.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2015

Classification via correlation-based feature grouping.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2015

Prediction of high-throughput protein-protein interactions based on protein sequence information.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2015

A novel approach for finding informative genes in ten subtypes of breast cancer.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2015

A new compact set of biomarkers for distinguishing among ten breast cancer subtypes.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Obtaining biomarkers in cancer progression from outliers of time-series clusters.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

ZSeq 2.0: A fully automatic preprocessing method for next generation sequencing data.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
A new multi-level thresholding algorithm for finding peaks in ChIP-Seq data.
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014

Breast cancer subtype identification using machine learning techniques.
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014

A model based on minimotifs for classification of stable protein-protein complexes.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2014

Computational analysis of the stability of SCF ligases employing domain information.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2013
Using desolvation energies of structural domains to predict stability of protein complexes.
Netw. Model. Anal. Health Informatics Bioinform., 2013

Identifying Informative Genes for Prediction of Breast Cancer Subtypes.
Proceedings of the Pattern Recognition in Bioinformatics, 2013

Prediction of Biological Protein-protein Interaction Types Using Short-Linear Motifs.
Proceedings of the ACM Conference on Bioinformatics, 2013

A New Paradigm for Pattern Classification: Nearest Border Techniques.
Proceedings of the AI 2013: Advances in Artificial Intelligence, 2013

2012
A Framework of Gene Subset Selection Using Multiobjective Evolutionary Algorithm.
Proceedings of the Pattern Recognition in Bioinformatics, 2012

Using structural domains to predict obligate and non-obligate protein-protein interactions.
Proceedings of the 2012 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2012

Prediction of crystal packing and biological protein-protein interactions.
Proceedings of the 2012 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2012

A model to predict and analyze protein-protein interaction types using electrostatic energies.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Finding genomic features from enriched regions in ChlP-Seq data.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

A new algorithm for finding enriched regions in ChIP-Seq data.
Proceedings of the ACM International Conference on Bioinformatics, 2012

Multi-level structural domain-domain interactions for prediction of obligate and non-obligate protein-protein interactions.
Proceedings of the ACM International Conference on Bioinformatics, 2012

2011
Image segmentation of biofilm structures using optimal multi-level thresholding.
Int. J. Data Min. Bioinform., 2011

A Fully Automatic Gridding Method for cDNA Microarray Images.
BMC Bioinform., 2011

New Gene Subset Selection Approaches Based on Linear Separating Genes and Gene-Pairs.
Proceedings of the Pattern Recognition in Bioinformatics, 2011

Analysis of obligate and non-obligate complexes using desolvation energies in domain-domain interactions.
Proceedings of the Tenth International Workshop on Data Mining in Bioinformatics, 2011

Applications of Multilevel Thresholding Algorithms to Transcriptomics Data.
Proceedings of the Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications, 2011

Domain-domain interactions in obligate and non-obligate protein-protein interactions.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Analysis of relevant physicochemical properties in obligate and non-obligate protein-protein interactions.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

A Novel Recursive Feature Subset Selection Algorithm.
Proceedings of the 11th IEEE International Conference on Bioinformatics and Bioengineering, 2011

Biological assessment of grid and spot detection in cDNA microarray images.
Proceedings of the ACM International Conference on Bioinformatics, 2011

2010
Selection based heuristics for the non-unique oligonucleotide probe selection problem in microarray design.
Pattern Recognit. Lett., 2010

Multi-class pairwise linear dimensionality reduction using heteroscedastic schemes.
Pattern Recognit., 2010

Multiple gene expression profile alignment for microarray time-series data clustering.
Bioinform., 2010

Biological Protein-Protein Interaction Prediction Using Binding Free Energies and Linear Dimensionality Reduction.
Proceedings of the Pattern Recognition in Bioinformatics, 2010

Sub-grid and Spot Detection in DNA Microarray Images Using Optimal Multi-level Thresholding.
Proceedings of the Pattern Recognition in Bioinformatics, 2010

New approaches to clustering microarray time-series data using multiple expression profile alignment.
Proceedings of the 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2010

Missing value imputation methods for gene-sample-time microarray data analysis.
Proceedings of the 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2010

Alignment versus variation methods for clustering microarray time-series data.
Proceedings of the IEEE Congress on Evolutionary Computation, 2010

Protein-protein interaction prediction using desolvation energies and interface properties.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

A parameterless automatic spot detection method for cDNA microarray images.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Alignment-based versus variation-based transformation methods for clustering microarray time-series data.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009
Microarray Time-Series Data Clustering via Multiple Alignment of Gene Expression Profiles.
Proceedings of the Pattern Recognition in Bioinformatics, 2009

A Pattern Classification Approach to DNA Microarray Image Segmentation.
Proceedings of the Pattern Recognition in Bioinformatics, 2009

Efficient Optimal Multi-level Thresholding for Biofilm Image Segmentation.
Proceedings of the Pattern Recognition in Bioinformatics, 2009

An Evolutionary Approach for Correcting Random Amplified Polymorphism DNA Images.
Proceedings of the Bioinspired Applications in Artificial and Natural Computation, 2009

Biofilm Image Segmentation Using Optimal Multi-level Thresholding.
Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009

2008
An Evolutionary Approach to the Non-unique Oligonucleotide Probe Selection Problem.
Trans. Comp. Sys. Biology, 2008

Clustering Time-Series Gene Expression Data with Unequal Time Intervals.
Trans. Comp. Sys. Biology, 2008

A theoretical comparison of two-class Fisher's and heteroscedastic linear dimensionality reduction schemes.
Pattern Recognit. Lett., 2008

Linear dimensionality reduction by maximizing the Chernoff distance in the transformed space.
Pattern Recognit., 2008

An efficient compression scheme for data communication which uses a new family of self-organizing binary search trees.
Int. J. Commun. Syst., 2008

An Efficient Algorithm for Optimal Multilevel Thresholding of Irregularly Sampled Histograms.
Proceedings of the Structural, 2008

Sequential Forward Selection Approach to the Non-unique Oligonucleotide Probe Selection Problem.
Proceedings of the Pattern Recognition in Bioinformatics, 2008

Evolution strategy with greedy probe selection heuristics for the non-unique oligonucleotide probe selection problem.
Proceedings of the 2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2008

Chernoff-Based Multi-class Pairwise Linear Dimensionality Reduction.
Proceedings of the Progress in Pattern Recognition, 2008

2007
On Finding the Best Parameters of Fuzzy k-Means for Clustering Microarray Data.
J. Multiple Valued Log. Soft Comput., 2007

Sub-grid Detection in DNA Microarray Images.
Proceedings of the Advances in Image and Video Technology, Second Pacific Rim Symposium, 2007

Processing Random Amplified Polymorphysm DNA Images Using the Radon Transform and Mathematical Morphology.
Proceedings of the Image Analysis and Recognition, 4th International Conference, 2007

Clustering Temporal Gene Expression Data with Unequal Time Intervals.
Proceedings of the 2nd International ICST Conference on Bio-Inspired Models of Network, 2007

2006
Stochastic Automata-Based Estimators for Adaptively Compressing Files With Nonstationary Distributions.
IEEE Trans. Syst. Man Cybern. Part B, 2006

A Hill-Climbing Approach for Automatic Gridding of cDNA Microarray Images.
IEEE ACM Trans. Comput. Biol. Bioinform., 2006

Geometric visualization of clusters obtained from fuzzy clustering algorithms.
Pattern Recognit., 2006

Stochastic learning-based weak estimation of multinomial random variables and its applications to pattern recognition in non-stationary environments.
Pattern Recognit., 2006

A fast and efficient nearly-optimal adaptive Fano coding scheme.
Inf. Sci., 2006

A New Linear Dimensionality Reduction Technique Based on Chernoff Distance.
Proceedings of the Advances in Artificial Intelligence, 2006

A New Approach to Multi-class Linear Dimensionality Reduction.
Proceedings of the Progress in Pattern Recognition, 2006

A Theoretical Comparison of Two Linear Dimensionality Reduction Techniques.
Proceedings of the Progress in Pattern Recognition, 2006

Toward New Paradigms to Combating Internet Child Pornography.
Proceedings of the Canadian Conference on Electrical and Computer Engineering, 2006

A New Profile Alignment Method for Clustering Gene Expression Data.
Proceedings of the Advances in Artificial Intelligence, 2006

On the Performance of Chernoff-Distance-Based Linear Dimensionality Reduction Techniques.
Proceedings of the Advances in Artificial Intelligence, 2006

2005
A one-dimensional analysis for the probability of error of linear classifiers for normally distributed classes.
Pattern Recognit., 2005

A formal analysis of why heuristic functions work.
Artif. Intell., 2005

A geometric framework to visualize fuzzy-clustered data.
Proceedings of the XXV International Conference of the Chilean Computer Science Society, 2005

A simulated annealing approach to find the optimal parameters for fuzzy clustering microarray data.
Proceedings of the XXV International Conference of the Chilean Computer Science Society, 2005

On Utilizing Stochastic Learning Weak Estimators for Training and Classification of Patterns with Non-stationary Distributions.
Proceedings of the KI 2005: Advances in Artificial Intelligence, 2005

Efficient Adaptive Data Compression Using Fano Binary Search Trees.
Proceedings of the Computer and Information Sciences, 2005

A New Approach to Automatically Detecting Grids in DNA Microarray Images.
Proceedings of the Image Analysis and Recognition, Second International Conference, 2005

A New Method for DNA Microarray Image Segmentation.
Proceedings of the Image Analysis and Recognition, Second International Conference, 2005

Fast Protein Superfamily Classification Using Principal Component Null Space Analysis.
Proceedings of the Advances in Artificial Intelligence, 2005

2004
Selecting the best hyperplane in the framework of optimal pairwise linear classifiers.
Pattern Recognit. Lett., 2004

An efficient approach to compute the threshold for multi-dimensional linear classifiers.
Pattern Recognit., 2004

A nearly-optimal Fano-based coding algorithm.
Inf. Process. Manag., 2004

A New Family of Weak Estimators for Training in Non-stationary Distributions.
Proceedings of the Structural, 2004

An Improved Clustering-Based Approach for DNA Microarray Image Segmentation.
Proceedings of the Image Analysis and Recognition: International Conference, 2004

An Empirical Evaluation of the Classification Error of Two Thresholding Methods for Fisher's Classifier.
Proceedings of the International Conference on Artificial Intelligence, 2004

New Bounds and Approximations for the Error of Linear Classifiers.
Proceedings of the Progress in Pattern Recognition, 2004

On Families of New Adaptive Compression Algorithms Suitable for Time-Varying Source Data.
Proceedings of the Advances in Information Systems, Third International Conference, 2004

2003
On optimal pairwise linear classifiers for normal distributions: the d-dimensional case.
Pattern Recognit., 2003

An Empirical Analysis of Traditional and Optimal Pairwise Linear Classifiers on Standard Benchmarks.
Proceedings of the Pattern Recognition in Information Systems, 2003

A New Approach That Selects a Single Hyperplane from the Optimal Pairwise Linear Classifier.
Proceedings of the Progress in Pattern Recognition, 2003

2002
On Optimal Pairwise Linear Classifiers for Normal Distributions: The Two-Dimensional Case.
IEEE Trans. Pattern Anal. Mach. Intell., 2002

The Efficiency of Histogram-like Techniques for Database Query Optimization.
Comput. J., 2002

Using Pattern Recognition Techniques to Derive a Formal Analysis of Why Heuristics Functions Work.
Proceedings of the Pattern Recognition in Information Systems, 2002

2001
Enhanced static Fano coding.
Proceedings of the IEEE International Conference on Systems, 2001

Histogram Methods in Query Optimization: The Relation between Accuracy and Optimality.
Proceedings of the Database Systems for Advanced Applications, Proceedings of the 7th International Conference on Database Systems for Advanced Applications (DASFAA 2001), 18-20 April 2001, 2001

Resolving Minsky's Paradox: The d-Dimensional Normal Distribution Case.
Proceedings of the AI 2001: Advances in Artificial Intelligence, 2001

2000
The Foundational Theory of Optimal Bayesian Pairwise Linear Classifiers.
Proceedings of the Advances in Pattern Recognition, Joint IAPR International Workshops SSPR 2000 and SPR 2000, [8th International Workshop on Structural and Syntactic Pattern Recognition, 3rd International Workshop on Statistical Techniques in Pattern Recognition], Alicante, Spain, August 30, 2000

An Empirical Comparison of Histogram-Like Techniques for Query Optimization.
Proceedings of the ICEIS 2000, 2000


  Loading...