Ludmil B. Alexandrov

According to our database, Ludmil B. Alexandrov authored at least 9 papers between 2007 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2023

Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment.

Marcos Díaz-Gay, Raviteja Vangara, Mark Barnes, Xi Wang, S. M. Ashiqul Islam, Ian Vermes, Stephen Duke, Nithish Bharadhwaj Narasimman, Ting Yang, Zichen Jiang, Sarah J. Moody, Sergey Senkin, Paul Brennan, Michael R. Stratton, Ludmil B. Alexandrov

Bioinform., December, 2023

2022

Examining clustered somatic mutations with SigProfilerClusters.

Erik N. Bergstrom, Mousumy Kundu, Noura Tbeileh, Ludmil B. Alexandrov

Bioinform., 2022

2020

Generating realistic null hypothesis of cancer mutational landscapes using SigProfilerSimulator.

Erik N. Bergstrom, Mark Barnes, Iñigo Martincorena, Ludmil B. Alexandrov

BMC Bioinform., 2020

2018

Pan-cancer genome and transcriptome analyses of 1, 699 paediatric leukaemias and solid tumours.

Xiaotu Ma, Yu Liu, Yanling Liu, Ludmil B. Alexandrov, Michael N. Edmonson, Charles Gawad, Xin Zhou, Yongjin Li, Michael Rusch, John Easton, Robert Huether, Veronica Gonzalez-Pena, Mark R. Wilkinson, Leandro Hermida, Sean Davis, Edgar Sioson, Stanley Pounds, Xueyuan Cao, Rhonda E. Ries, Zhaoming Wang, Xiang Chen, Li Dong, Sharon J. Diskin, Malcolm A. Smith, Jaime M. Guidry Auvil, Paul S. Meltzer, Ching C. Lau, Elizabeth J. Perlman, John M. Maris, Soheil Meshinchi, Stephen P. Hunger, Daniela S. Gerhard, Jinghui Zhang

Nat., 2018

2017

Nonnegative/binary matrix factorization with a D-Wave quantum annealer.

Daniel O'Malley, Velimir V. Vesselinov, Boian S. Alexandrov, Ludmil B. Alexandrov

CoRR, 2017

2016

The role of structural parameters in DNA cyclization.

Ludmil B. Alexandrov, Alan R. Bishop, Kim Ø. Rasmussen, Boian S. Alexandrov

BMC Bioinform., 2016

2014

Fast randomization of large genomic datasets while preserving alteration counts.

Andrea Gobbi, Francesco Iorio, Kevin J. Dawson, David C. Wedge, David Tamborero, Ludmil B. Alexandrov, Núria López-Bigas, Mathew Garnett, Giuseppe Jurman, Julio Saez-Rodriguez

Bioinform., 2014

2013

Binding of Nucleoid-Associated Protein Fis to DNA Is Regulated by DNA Breathing Dynamics.

Kristy Nowak-Lovato, Ludmil B. Alexandrov, Afsheen Banisadr, Amy L. Bauer, Alan R. Bishop, Anny Usheva, Fangping Mu, Elizabeth Hong-Geller, Kim Ø. Rasmussen, William S. Hlavacek, Boian S. Alexandrov

PLoS Comput. Biol., 2013

2007

Modelling the magnetic signature of neuronal tissue.

K. B. Blagoev, Bogdan Mihaila, B. J. Travis, Ludmil B. Alexandrov, Alan R. Bishop, Douglas M. Ranken, Stefan Posse, Charles Gasparovic, Andy R. Mayer, Cheryl J. Aine, István Ulbert, M. Morita, W. Müller, J. Connor, Eric Halgren

NeuroImage, 2007