Luca Pireddu

According to our database, Luca Pireddu authored at least 27 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

WorkflowHub: a registry for computational workflows.

Johan Gustafsson, Sean R. Wilkinson, Finn Bacall, Luca Pireddu, Stian Soiland-Reyes, Simone Leo, Stuart Owen, Nick S. Juty, José María Fernández, Björn A. Grüning, Tom Brown, Hervé Ménager, Salvador Capella-Gutiérrez, Frederik Coppens, Carole A. Goble

CoRR, 2024

2023

Recording provenance of workflow runs with RO-Crate.

Simone Leo, Michael R. Crusoe, Laura Rodríguez-Navas, Raül Sirvent, Alexander Kanitz, Paul De Geest, Rudolf Wittner, Luca Pireddu, Daniel Garijo, José M. Fernández, Iacopo Colonnelli, Matej Gallo, Tazro Ohta, Hirotaka Suetake, Salvador Capella-Gutiérrez, Renske de Wit, Bruno de Paula Kinoshita, Stian Soiland-Reyes

CoRR, 2023

The EOSC-Life Workflow Collaboratory for the Life Sciences.

Carole A. Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Ignacio Eguinoa, Bert Droesbeke, Hervé Ménager, Laura Rodríguez-Navas, José María Fernández, Björn A. Grüning, Simone Leo, Luca Pireddu, Michael R. Crusoe, Johan Gustafsson, Salvador Capella-Gutiérrez, Frederik Coppens

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2022

EOSC-LIFE WP4 TOOLBOX: Toolbox for sharing of sensitive data - a concept description.

Jan-Willem Boiten, Christian Ohmann, Ayodeji Adeniran, Steve Canham, Mónica Cano Abadia, Gauthier Chassang, Maria Luisa Chiusano, Romain David, Maddalena Fratelli, Philip Gribbon, Petr Holub, Rebecca Ludwig, Michaela Theresia Mayrhofer, Mihaela Matei, Arshiya Merchant, Maria Panagiotopoulou, Luca Pireddu, Alex Sánchez-Pla, Irene Schlünder, George Tsamis, Harald Wagener

CoRR, 2022

AI Support for Accelerating Histopathological Slide Examinations of Prostate Cancer in Clinical Studies.

Mauro Del Rio, Luca Lianas, Oskar Aspegren, Giovanni Busonera, Francesco Versaci, Renata Zelic, Per H. Vincent, Simone Leo, Andreas Pettersson, Olof Akre, Luca Pireddu

Proceedings of the Image Analysis and Processing. ICIAP 2022 Workshops, 2022

The DeepHealth Toolkit: A Key European Free and Open-Source Software for Deep Learning and Computer Vision Ready to Exploit Heterogeneous HPC and Cloud Architectures.

Marco Aldinucci, David Atienza, Federico Bolelli, Mónica Caballero, Iacopo Colonnelli, José Flich, Jon Ander Gómez, David González, Costantino Grana, Marco Grangetto, Simone Leo, Pedro López, Dana Oniga, Roberto Paredes, Luca Pireddu, Eduardo Quiñones, Tatiana Silva, Enzo Tartaglione, Marina Zapater

Proceedings of the Technologies and Applications for Big Data Value, 2022

2021

ISO 23494: Biotechnology - Provenance Information Model for Biological Specimen And Data.

Rudolf Wittner, Petr Holub, Heimo Müller, Jörg Geiger, Carole A. Goble, Stian Soiland-Reyes, Luca Pireddu, Francesca Frexia, Cecilia Mascia, Elliot Fairweather, Jason R. Swedlow, Josh Moore, Caterina Strambio-De-Castillia, David Grunwald, Hiroki Nakae

Proceedings of the Provenance and Annotation of Data and Processes, 2021

2020

The openEHR Genomics Project.

Cecilia Mascia, Francesca Frexia, Paolo Uva, Gianluigi Zanetti, Luca Pireddu, Gideon Giacomelli, Christina Jaeger-Schmidt, Aurelie Tomczak, Simon Schumacher, Florian Kraecher, Roland Eils, Silje Ljosland Bakke, Heather Leslie

Proceedings of the Digital Personalized Health and Medicine - Proceedings of MIE 2020, Medical Informatics Europe, Geneva, Switzerland, April 28, 2020

The DeepHealth Toolkit: A Unified Framework to Boost Biomedical Applications.

Michele Cancilla, Laura Canalini, Federico Bolelli, Stefano Allegretti, Salvador Carrión, Roberto Paredes, Jon Ander Gómez, Simone Leo, Marco Enrico Piras, Luca Pireddu, Asaf Badouh, Santiago Marco-Sola, Lluc Alvarez, Miquel Moretó, Costantino Grana

Proceedings of the 25th International Conference on Pattern Recognition, 2020

2019

Interoperable and scalable data analysis with microservices: applications in metabolomics.

Payam Emami Khoonsari, Pablo A. Moreno, Sven Bergmann, Joachim Burman, Marco Capuccini, Matteo Carone, Marta Cascante, Pedro de Atauri, Carles Foguet, Alejandra N. González-Beltrán, Thomas Hankemeier, Kenneth Haug, Sijin He, Stephanie Herman, David Johnson, Namrata Kale, Anders Larsson, Steffen Neumann, Kristian Peters, Luca Pireddu, Philippe Rocca-Serra, Pierrick Roger, Rico Rueedi, Christoph Ruttkies, Noureddin Sadawi, Reza M. Salek, Susanna-Assunta Sansone, Daniel Schober, Vitaly A. Selivanov, Etienne A. Thévenot, Michael van Vliet, Gianluigi Zanetti, Christoph Steinbeck, Kim Kultima, Ola Spjuth

Bioinform., 2019

Container Orchestration on HPC Clusters.

Marco Enrico Piras, Luca Pireddu, Marco Moro, Gianluigi Zanetti

Proceedings of the High Performance Computing, 2019

TDM Edge Gateway: A Flexible Microservice-Based Edge Gateway Architecture for Heterogeneous Sensors.

Massimo Gaggero, Giovanni Busonera, Luca Pireddu, Gianluigi Zanetti

Proceedings of the Euro-Par 2019: Parallel Processing Workshops, 2019

2018

Kafka interfaces for composable streaming genomics pipelines.

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

Proceedings of the 2018 IEEE EMBS International Conference on Biomedical & Health Informatics, 2018

2017

Distributed stream processing for genomics pipelines.

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

PeerJ Prepr., 2017

wft4galaxy: a workflow testing tool for galaxy.

Marco Enrico Piras, Luca Pireddu, Gianluigi Zanetti

Bioinform., 2017

2016

Scalable genomics: From raw data to aligned reads on Apache YARN.

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

Proceedings of the 2016 IEEE International Conference on Big Data (IEEE BigData 2016), 2016

2014

SeqPig: simple and scalable scripting for large sequencing data sets in Hadoop.

André Schumacher, Luca Pireddu, Matti Niemenmaa, Aleksi Kallio, Eija Korpelainen, Gianluigi Zanetti, Keijo Heljanko

Bioinform., 2014

BioBlend.objects: metacomputing with Galaxy.

Simone Leo, Luca Pireddu, Gianmauro Cuccuru, Luca Lianas, Nicola Soranzo, Enis Afgan, Gianluigi Zanetti

Bioinform., 2014

An automated infrastructure to support high-throughput bioinformatics.

Gianmauro Cuccuru, Simone Leo, Luca Lianas, Michele Muggiri, Andrea Pinna, Luca Pireddu, Paolo Uva, Andrea Angius, Giorgio Fotia, Gianluigi Zanetti

Proceedings of the International Conference on High Performance Computing & Simulation, 2014

A Hadoop-Galaxy adapter for user-friendly and scalable data-intensive bioinformatics in Galaxy.

Luca Pireddu, Simone Leo, Nicola Soranzo, Gianluigi Zanetti

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2011

SEAL: a distributed short read mapping and duplicate removal tool.

Luca Pireddu, Simone Leo, Gianluigi Zanetti

Bioinform., 2011

2010

Fingerprint-based detection of acute aquatic toxicity.

Luca Pireddu, Lisa Michielan, Matteo Floris, Patricia Rodriguez-Tomé, Stefano Moro

J. Cheminformatics, 2010

2009

MMsINC: a large-scale chemoinformatics database.

Joel Masciocchi, Gianfranco Frau, Marco Fanton, Mattia Sturlese, Matteo Floris, Luca Pireddu, Piergiorgio Palla, Fabian Cedrati, Patricia Rodriguez-Tomé, Stefano Moro

Nucleic Acids Res., 2009

2006

The Path-A metabolic pathway prediction web server.

Luca Pireddu, Duane Szafron, Paul Lu, Russell Greiner

Nucleic Acids Res., 2006

2005

Pathway Analyst--Automated Metabolic Pathway Prediction.

Luca Pireddu, Brett Poulin, Duane Szafron, Paul Lu, David S. Wishart

Proceedings of the 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2005

The Proteome Analyst Suite of Automated Function Prediction Tools.

Brett Poulin, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Roman Eisner, Alona Fyshe, Brandon Pearcy, Luca Pireddu

Proceedings of the Proceedings, 2005

2004

Taxonomy-Based Routing Indices for Peer-to-Peer Networks.

Luca Pireddu, Mario A. Nascimento

Proceedings of the SIGIR Workshop on Peer-to-Peer Information Retrieval, 2004