Lore Depuydt

According to our database, Lore Depuydt authored at least 7 papers between 2022 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes.

Luca Renders, Lore Depuydt, Sven Rahmann, Jan Fostier

J. Comput. Biol., 2024

b-move: Faster Bidirectional Character Extensions in a Run-Length Compressed Index.

Lore Depuydt, Luca Renders, Simon Van de Vyver, Lennart Veys, Travis Gagie, Jan Fostier

Proceedings of the 24th International Workshop on Algorithms in Bioinformatics, 2024

Automated Design of Efficient Search Schemes for Lossless Approximate Pattern Matching.

Luca Renders, Lore Depuydt, Sven Rahmann, Jan Fostier

Proceedings of the Research in Computational Molecular Biology, 2024

Faster Maximal Exact Matches with Lazy LCP Evaluation.

Adrián Goga, Lore Depuydt, Nathaniel K. Brown, Jan Fostier, Travis Gagie, Gonzalo Navarro

Proceedings of the Data Compression Conference, 2024

2023

Pan-genome de Bruijn graph using the bidirectional FM-index.

Lore Depuydt, Luca Renders, Thomas Abeel, Jan Fostier

BMC Bioinform., December, 2023

Suffixient Sets.

Lore Depuydt, Travis Gagie, Ben Langmead, Giovanni Manzini, Nicola Prezza

CoRR, 2023

2022

Approximate Pattern Matching Using Search Schemes and In-Text Verification.

Luca Renders, Lore Depuydt, Jan Fostier

Proceedings of the Bioinformatics and Biomedical Engineering, 2022