Limsoon Wong
Orcid: 0000-0003-1241-5441Affiliations:
- National University of Singapore (NUS), Department of Computer Science
According to our database1,
Limsoon Wong
authored at least 231 papers
between 1989 and 2024.
Collaborative distances:
Collaborative distances:
Awards
ACM Fellow
ACM Fellow 2013, "For contributions to database theory and computational biology.".
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
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on zbmath.org
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on orcid.org
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on d-nb.info
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on dl.acm.org
On csauthors.net:
Bibliography
2024
J. Bioinform. Comput. Biol., April, 2024
Int. J. Data Sci. Anal., January, 2024
PLoS Comput. Biol., 2024
Proceedings of the Provenance of Elegance in Computation - Essays Dedicated to Val Tannen, 2024
2023
Briefings Bioinform., July, 2023
J. Bioinform. Comput. Biol., April, 2023
PLoS Comput. Biol., March, 2023
Evaluating network-based missing protein prediction using p-values, Bayes Factors, and probabilities.
J. Bioinform. Comput. Biol., February, 2023
2022
J. Bioinform. Comput. Biol., December, 2022
BMC Bioinform., 2022
2021
Int. J. Data Sci. Anal., 2021
Identifying collateral and synthetic lethal vulnerabilities within the DNA-damage response.
BMC Bioinform., 2021
Bioinform., 2021
Genetic source completeness of HIV-1 circulating recombinant forms (CRFs) predicted by multi-label learning.
Bioinform., 2021
2020
Avoid Oversimplifications in Machine Learning: Going beyond the Class-Prediction Accuracy.
Patterns, 2020
Extensions of the External Validation for Checking Learned Model Interpretability and Generalizability.
Patterns, 2020
Genom. Proteom. Bioinform., 2020
Bioinform., 2020
2019
Bioinform., 2019
Briefings Bioinform., 2019
2018
Genom. Proteom. Bioinform., 2018
Discovering pan-correlation patterns from time course data sets by efficient mining algorithms.
Computing, 2018
SPSNet: subpopulation-sensitive network-based analysis of heterogeneous gene expression data.
BMC Syst. Biol., 2018
2017
Redhyte: a self-diagnosing, self-correcting, and helpful hypothesis analysis platform.
J. Inf. Telecommun., 2017
Editorial - Bioinformatics development at the BGRS\SB conference series: 10th anniversary.
J. Bioinform. Comput. Biol., 2017
OrthoGNC: A Software for Accurate Identification of Orthologs Based on Gene Neighborhood Conservation.
Genom. Proteom. Bioinform., 2017
Protein complex-based analysis is resistant to the obfuscating consequences of batch effects - a case study in clinical proteomics.
BMC Genom., 2017
Bioinform., 2017
2016
J. Bioinform. Comput. Biol., 2016
Spectra-first feature analysis in clinical proteomics - A case study in renal cancer.
J. Bioinform. Comput. Biol., 2016
BMC Bioinform., 2016
Proceedings of the Advanced Data Mining and Applications - 12th International Conference, 2016
Proceedings of the Intelligent Information and Database Systems - 8th Asian Conference, 2016
2015
ACM Trans. Knowl. Discov. Data, 2015
Burial Level Change Defines a High Energetic Relevance for Protein Binding Interfaces.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
J. Bioinform. Comput. Biol., 2015
A quantum leap in the reproducibility, precision, and sensitivity of gene expression profile analysis even when sample size is extremely small.
J. Bioinform. Comput. Biol., 2015
Int. J. Bioinform. Res. Appl., 2015
Hi-Jack: a novel computational framework for pathway-based inference of host-pathogen interactions.
Bioinform., 2015
Proceedings of the 2015 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2015
2014
IEEE Trans. Knowl. Data Eng., 2014
IEEE ACM Trans. Comput. Biol. Bioinform., 2014
IEEE ACM Trans. Comput. Biol. Bioinform., 2014
J. Bioinform. Comput. Biol., 2014
Discovery of small protein complexes from PPI networks with size-specific supervised weighting.
BMC Syst. Biol., 2014
eCAMBer: efficient support for large-scale comparative analysis of multiple bacterial strains.
BMC Bioinform., 2014
Integrating water exclusion theory into βcontacts to predict binding free energy changes and binding hot spots.
BMC Bioinform., 2014
Database J. Biol. Databases Curation, 2014
2013
A Performance Study of Three Disk-based Structures for Indexing and Querying Frequent Itemsets.
Proc. VLDB Endow., 2013
J. Bioinform. Comput. Biol., 2013
J. Bioinform. Comput. Biol., 2013
J. Bioinform. Comput. Biol., 2013
Stringent DDI-based Prediction of H. sapiens-M. tuberculosis H37Rv Protein-Protein Interactions.
BMC Syst. Biol., 2013
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions.
BMC Syst. Biol., 2013
Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding.
BMC Bioinform., 2013
Random forests on Hadoop for genome-wide association studies of multivariate neuroimaging phenotypes.
BMC Bioinform., 2013
A dichotomy in the intensional expressive power of nested relational calculi augmented with aggregate functions and a powerset operator.
Proceedings of the 32nd ACM SIGMOD-SIGACT-SIGART Symposium on Principles of Database Systems, 2013
The Dichotomous Intensional Expressive Power of the Nested Relational Calculus with Powerset.
Proceedings of the In Search of Elegance in the Theory and Practice of Computation, 2013
Emerging Pattern Based Rules Characterizing Subtypes of Leukemia.
Proceedings of the Contrast Data Mining: Concepts, Algorithms, and Applications, 2013
2012
Detection of Outlier Residues for Improving Interface Prediction in Protein Heterocomplexes.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012
Discovery of Protein Complexes with Core-Attachment Structures from Tandem Affinity Purification (TAP) Data.
J. Comput. Biol., 2012
A Short Introduction to Some Recent Progress in phylogenetic Network Reconstruction, genome Mapping, gene Expression Analysis, molecular Dynamic Simulation, and Other Problems in Bioinformatics.
J. Bioinform. Comput. Biol., 2012
Int. J. Knowl. Discov. Bioinform., 2012
Int. J. Bioinform. Res. Appl., 2012
A network-based maximum link approach towards MS identifies potentially important roles for undetected ARRB1/2 and ACTB in liver cancer progression.
Int. J. Bioinform. Res. Appl., 2012
IntPath-an integrated pathway gene relationship database for model organisms and important pathogens.
BMC Syst. Biol., 2012
Supervised maximum-likelihood weighting of composite protein networks for complex prediction.
BMC Syst. Biol., 2012
BMC Bioinform., 2012
Progressive dry-core-wet-rim hydration trend in a nested-ring topology of protein binding interfaces.
BMC Bioinform., 2012
BMC Bioinform., 2012
Response: an empirical comparison of several recent epistatic interaction detection methods.
Bioinform., 2012
Proceedings of the 18th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2012
AssocExplorer: an association rule visualization system for exploratory data analysis.
Proceedings of the 18th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2012
2011
Mining Iterative Generators and Representative Rules for Software Specification Discovery.
IEEE Trans. Knowl. Data Eng., 2011
Antibody-Specified B-Cell Epitope Prediction in Line with the Principle of Context-Awareness.
IEEE ACM Trans. Comput. Biol. Bioinform., 2011
Introduction - Some New Results and Tools for Protein Function Prediction, RNA Target Site Prediction, Genotype Calling, Environmental Genomics, and More.
J. Bioinform. Comput. Biol., 2011
Brief Introduction to Some New Papers on Lateral Transfer Reconstruction, Drug Candidate Screening, Disease Gene Identification, and Other Results.
J. Bioinform. Comput. Biol., 2011
Using Biological Networks in Protein Function Prediction and Gene Expression Analysis.
Internet Math., 2011
DBAC: A simple prediction method for protein binding hot spots based on burial levels and deeply buried atomic contacts.
BMC Syst. Biol., 2011
BMC Bioinform., 2011
CAMBerVis: visualization software to support comparative analysis of multiple bacterial strains.
Bioinform., 2011
<i>eCEO</i>: an efficient Cloud Epistasis cOmputing model in genome-wide association study.
Bioinform., 2011
Bioinform., 2011
Structural analysis of the hot spots in the binding between H1N1 HA and the 2D1 antibody: do mutations of H1N1 from 1918 to 2009 affect much on this binding?
Bioinform., 2011
Bioinform., 2011
Proceedings of the 27th International Conference on Data Engineering, 2011
2010
Brief Introduction to Some New Results in Gene Expression Analysis, Systems Biology Modeling, Motif Identification, and (noncoding) RNA Analysis.
J. Bioinform. Comput. Biol., 2010
Wrestling with Biomedical Research Results: Language Resources and Literature Analysis.
J. Bioinform. Comput. Biol., 2010
Comput. Intell., 2010
Protein complex prediction based on k-connected subgraphs in protein interaction network.
BMC Syst. Biol., 2010
BMC Syst. Biol., 2010
BMC Bioinform., 2010
FastTagger: an efficient algorithm for genome-wide tag SNP selection using multi-marker linkage disequilibrium.
BMC Bioinform., 2010
DA 1.0: parameter estimation of biological pathways using data assimilation approach.
Bioinform., 2010
Efficiently Finding the Best Parameter for the Emerging Pattern-Based Classifier PCL.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
2009
J. Comput. Sci. Technol., 2009
J. Bioinform. Comput. Biol., 2009
Key node selection for containing infectious disease spread using particle swarm optimization.
Proceedings of the 2009 IEEE Swarm Intelligence Symposium, 2009
Proceedings of the Complex Sciences, 2009
Proceedings of the Bioinformatics and Computational Biology, 2009
2008
A new concise representation of frequent itemsets using generators and a positive border.
Knowl. Inf. Syst., 2008
J. Bioinform. Comput. Biol., 2008
Inf. Softw. Technol., 2008
Proceedings of the 31st Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2008
Maximal Quasi-Bicliques with Balanced Noise Tolerance: Concepts and Co-clustering Applications.
Proceedings of the SIAM International Conference on Data Mining, 2008
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2008
Proceedings of the Advanced Data Mining and Applications, 4th International Conference, 2008
2007
Maximal Biclique Subgraphs and Closed Pattern Pairs of the Adjacency Matrix: A One-to-One Correspondence and Mining Algorithms.
IEEE Trans. Knowl. Data Eng., 2007
Enabling more sophisticated gene expression analysis for understanding diseases and optimizing treatments.
SIGKDD Explor., 2007
BMC Bioinform., 2007
An efficient strategy for extensive integration of diverse biological data for protein function prediction.
Bioinform., 2007
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2007
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007
Mining statistically important equivalence classes and delta-discriminative emerging patterns.
Proceedings of the 13th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2007
CPS-tree: A Compact Partitioned Suffix Tree for Disk-based Indexing on Large Genome Sequences.
Proceedings of the 23rd International Conference on Data Engineering, 2007
Proceedings of the 23rd International Conference on Data Engineering, 2007
Proceedings of the Algebraic Biology, Second International Conference, 2007
2006
ACM Trans. Asian Lang. Inf. Process., 2006
Int. J. Bioinform. Res. Appl., 2006
Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale.
Bioinform., 2006
Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions.
Bioinform., 2006
Dragon Promoter Mapper (DPM): a Bayesian framework for modelling promoter structures.
Bioinform., 2006
Exploring Essential Attributes for Detecting MicroRNA Precursors from Background Sequences.
Proceedings of the Data Mining and Bioinformatics, First International Workshop, 2006
Adventures of a Logician-Engineer: A Journey through Logic, Engineering, Medicine, Biology, and Statistics.
Proceedings of the 8th International Symposium on Symbolic and Numeric Algorithms for Scientific Computing (SYNASC 2006), 2006
Positive Borders or Negative Borders: How to Make Lossless Generator Based Representations Concise.
Proceedings of the Sixth SIAM International Conference on Data Mining, 2006
Proceedings of the Pattern Recognition in Bioinformatics, International Workshop, 2006
Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, 2006
Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, 2006
Proceedings of the Proceedings, 2006
2005
Bioinform., 2005
DNAFSMiner: a web-based software toolbox to recognize two types of functional sites in DNA sequences.
Bioinform., 2005
Proceedings of the Twenty-fourth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 2005
Proceedings of the Knowledge Discovery in Databases: PKDD 2005, 2005
LinkageTracker: A Discriminative Pattern Tracking Approach to Linkage Disequilibrium Mapping.
Proceedings of the Database Systems for Advanced Applications, 2005
Proceedings of the Database Systems for Advanced Applications, 2005
Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005
2004
Mach. Learn., 2004
Silico Biol., 2004
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004
Use of Built-in Features in the Interpretation of High-dimensional Cancer Diagnosis Data..
Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC 2004), 2004
2003
Simple rules underlying gene expression profiles of more than six subtypes of acute lymphoblastic leukemia (ALL) patients.
Bioinform., 2003
Proceedings of the Advances in Web-Age Information Management, 2003
Mean-entropy discretized features are effective for classifying high-dimensional biomedical data.
Proceedings of the 3nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2003), 2003
Proceedings of the Database Theory, 2003
Discovery of significant rules for classifying cancer diagnosis data.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003
Proceedings of the First Asia-Pacific Bioinformatics Conference (APBC 2003), 2003
The Kleisli Query System as a Backbone for Bioinformatics Data Integration and Analysis.
Proceedings of the Bioinformatics, 2003
2002
Theor. Comput. Sci., 2002
Nucleic Acids Res., 2002
Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns.
Bioinform., 2002
Bioinform., 2002
Proceedings of the 7th Pacific Symposium on Biocomputing, 2002
Proceedings of the Principles of Data Mining and Knowledge Discovery, 2002
Proceedings of the International Database Engineering & Applications Symposium, 2002
Solving the Fragmentation Problem of Decision Trees by Discovering Boundary Emerging Patterns.
Proceedings of the 2002 IEEE International Conference on Data Mining (ICDM 2002), 2002
2001
Proceedings of the 6th Pacific Symposium on Biocomputing, 2001
Proceedings of the 6th Pacific Symposium on Biocomputing, 2001
2000
Proceedings of the Fifth ACM SIGPLAN International Conference on Functional Programming (ICFP '00), 2000
Kleisli, its Exchange Format, Supporting Tools, and an Application in Protein Interaction Extraction.
Proceedings of the 1st IEEE International Symposium on Bioinformatics and Biomedical Engineering, 2000
1999
Proceedings of the Discovery Science, 1999
Proceedings of the Research Issues in Structured and Semistructured Database Programming, 1999
1998
Proceedings of the STACS 98, 1998
Proceedings of the SIGMOD 1998, 1998
1997
Some Relationships between the FOIES and S1 Arity Hierarchies.
Bull. EATCS, 1997
Incremental Recomputation of Recursive Queries with Nested Sets and Aggregate Functions.
Proceedings of the Database Programming Languages, 6th International Workshop, 1997
Proceedings of the Database Programming Languages, 6th International Workshop, 1997
1996
Normal Forms and Conservative Extension Properties for Query Languages over Collection Types.
J. Comput. Syst. Sci., 1996
J. Comput. Syst. Sci., 1996
A Query Language for Multidimensional Arrays: Design, Implementation, and Optimization Techniques.
Proceedings of the 1996 ACM SIGMOD International Conference on Management of Data, 1996
Proceedings of the Seventh International Workshop on Database and Expert Systems Applications, 1996
1995
Theor. Comput. Sci., 1995
Inf. Process. Lett., 1995
Proceedings of the VLDB'95, 1995
On Impossibility of Decremental Recomputation of Recursive Queries in Relational Calculus and SQL.
Proceedings of the Database Programming Languages (DBPL-5), 1995
1994
Querying Nested Collections.
PhD thesis, 1994
Inf. Process. Lett., 1994
Proceedings of the Thirteenth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 1994
1993
Proceedings of the Twelfth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 1993
Proceedings of the Twelfth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 1993
Aggregate Functions, Conservative Extensions, and Linear Orders.
Proceedings of the Database Programming Languages (DBPL-4), Proceedings of the Fourth International Workshop on Database Programming Languages - Object Models and Languages, Manhattan, New York City, USA, 30 August, 1993
Some Properties of Query Languages for Bags.
Proceedings of the Database Programming Languages (DBPL-4), Proceedings of the Fourth International Workshop on Database Programming Languages - Object Models and Languages, Manhattan, New York City, USA, 30 August, 1993
Heterogeneous Query Optimization Using Maximal Sub-Queries.
Proceedings of the 3rd International Conference on Database Systems for Advanced Applications (DASFAA), 1993
PINOL: A Persistent Inferential Object Oriented Language for Databases.
Proceedings of the 3rd International Conference on Database Systems for Advanced Applications (DASFAA), 1993
1992
1991
Proceedings of the Deductive and Object-Oriented Databases, 1991
1990
1989
Inference Rules in Object Oriented Programminh Systems.
Proceedings of the Deductive and Object-Oriented Databases, 1989