Lijun Quan

Orcid: 0000-0003-4551-4198

According to our database1, Lijun Quan authored at least 22 papers between 2013 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
MultiModRLBP: A Deep Learning Approach for Multi-Modal RNA-Small Molecule Ligand Binding Sites Prediction.
IEEE J. Biomed. Health Informatics, August, 2024

RPEMHC: improved prediction of MHC-peptide binding affinity by a deep learning approach based on residue-residue pair encoding.
Bioinform., January, 2024

2023
DeepMPSF: A Deep Learning Network for Predicting General Protein Phosphorylation Sites Based on Multiple Protein Sequence Features.
J. Chem. Inf. Model., November, 2023

Simultaneous Prediction of Interaction Sites on the Protein and Peptide Sides of Complexes through Multilayer Graph Convolutional Networks.
J. Chem. Inf. Model., April, 2023

CAPLA: improved prediction of protein-ligand binding affinity by a deep learning approach based on a cross-attention mechanism.
Bioinform., February, 2023

How Deepbics Quantifies Intensities of Transcription Factor-DNA Binding and Facilitates Prediction of Single Nucleotide Variant Pathogenicity With a Deep Learning Model Trained On ChIP-Seq Data Sets.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

ctP<sup>2</sup>ISP: Protein-Protein Interaction Sites Prediction Using Convolution and Transformer With Data Augmentation.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

DGCddG: Deep Graph Convolution for Predicting Protein-Protein Binding Affinity Changes Upon Mutations.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

TransRNAm: Identifying Twelve Types of RNA Modifications by an Interpretable Multi-Label Deep Learning Model Based on Transformer.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022
Learning Useful Representations of DNA Sequences From ChIP-Seq Datasets for Exploring Transcription Factor Binding Specificities.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Multisource Attention-Mechanism-Based Encoder-Decoder Model for Predicting Drug-Drug Interaction Events.
J. Chem. Inf. Model., 2022

SemanticCAP: Chromatin Accessibility Prediction Enhanced by Features Learning from a Language Model.
CoRR, 2022

TransPPMP: predicting pathogenicity of frameshift and non-sense mutations by a Transformer based on protein features.
Bioinform., 2022

Identifying modifications on DNA-bound histones with joint deep learning of multiple binding sites in DNA sequence.
Bioinform., 2022

2021
Quantifying Intensities of Transcription Factor-DNA Binding by Learning From an Ensemble of Protein Binding Microarrays.
IEEE J. Biomed. Health Informatics, 2021

2020
Developing parallel ant colonies filtered by deep learned constrains for predicting RNA secondary structure with pseudo-knots.
Neurocomputing, 2020

2019
Sequence-based prediction of protein-protein interaction sites by simplified long short-term memory network.
Neurocomputing, 2019

2016
STRUM: structure-based prediction of protein stability changes upon single-point mutation.
Bioinform., 2016

2014
Improved packing of protein side chains with parallel ant colonies.
BMC Bioinform., 2014

2013
patGPCR: A Multitemplate Approach for Improving 3D Structure Prediction of Transmembrane Helices of G-Protein-Coupled Receptors.
Comput. Math. Methods Medicine, 2013

Packing protein side-chains by parallel ant colonies.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

A protein-peptide docking program with modeling receptor flexible areas.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013


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