Li Chen
Orcid: 0000-0001-9372-5606Affiliations:
- University of Florida, Department of Biostatistics, Gainesville, FL, USA
- Indiana University, School of Medicine, Center for Computational Biology and Bioinformatics, Indianapolis, IN, US
- Auburn University, AL, USA (2017-2019)
- Emory University, Depatment of Computer Science, GA, USA (PhD 2017)
According to our database1,
Li Chen
authored at least 18 papers
between 2011 and 2024.
Collaborative distances:
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Bibliography
2024
scaDA: A novel statistical method for differential analysis of single-cell chromatin accessibility sequencing data.
PLoS Comput. Biol., 2024
2023
TIVAN-indel: a computational framework for annotating and predicting non-coding regulatory small insertions and deletions.
Bioinform., February, 2023
DeepPHiC: predicting promoter-centered chromatin interactions using a novel deep learning approach.
Bioinform., January, 2023
2022
DeepPerVar: a multi-modal deep learning framework for functional interpretation of genetic variants in personal genome.
Bioinform., December, 2022
Exploiting deep transfer learning for the prediction of functional non-coding variants using genomic sequence.
Bioinform., 2022
2021
WEVar: a novel statistical learning framework for predicting noncoding regulatory variants.
Briefings Bioinform., 2021
Briefings Bioinform., 2021
Genome-wide circadian rhythm detection methods: systematic evaluations and practical guidelines.
Briefings Bioinform., 2021
2020
Application of topic models to a compendium of ChIP-Seq datasets uncovers recurrent transcriptional regulatory modules.
Bioinform., 2020
circMeta: a unified computational framework for genomic feature annotation and differential expression analysis of circular RNAs.
Bioinform., 2020
Bioinform., 2020
2019
Bioinform., 2019
Bioinform., 2019
2017
Nucleic Acids Res., 2017
2016
traseR: an R package for performing trait-associated SNP enrichment analysis in genomic intervals.
Bioinform., 2016
2015
A novel statistical method for quantitative comparison of multiple ChIP-seq datasets.
Bioinform., 2015
glmgraph: an R package for variable selection and predictive modeling of structured genomic data.
Bioinform., 2015
2011
hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data.
Bioinform., 2011