Leszek Rychlewski

According to our database, Leszek Rychlewski authored at least 30 papers between 2000 and 2014.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2014

3D-Hit: fast structural comparison of proteins on multicore architectures.

Lukasz Bieniasz-Krzywiec, Maciej Cytowski, Leszek Rychlewski, Dariusz Plewczynski

Optim. Lett., 2014

HarmonyDOCK: The Structural Analysis of Poses in Protein-Ligand Docking.

Dariusz Plewczynski, Anna Philips, Marcin von Grotthuss, Leszek Rychlewski, Krzysztof Ginalski

J. Comput. Biol., 2014

2011

Detailed Mechanism of Squalene Epoxidase Inhibition by Terbinafine.

Marcin Nowosielski, Marcin Hoffmann, Lucjan Stanislaw Wyrwicz, Piotr Stepniak, Dariusz Plewczynski, Michal Lazniewski, Krzysztof Ginalski, Leszek Rychlewski

J. Chem. Inf. Model., 2011

VoteDock: Consensus docking method for prediction of protein-ligand interactions.

Dariusz Plewczynski, Michal Lazniewski, Marcin von Grotthuss, Leszek Rychlewski, Krzysztof Ginalski

J. Comput. Chem., 2011

2010

ELM: the status of the 2010 eukaryotic linear motif resource.

Cathryn M. Gould, Francesca Diella, Allegra Via, Pål Puntervoll, Christine Gemünd, Sophie Chabanis-Davidson, Sushama Michael, Ahmed Sayadi, Jan Christian Bryne, Claudia Chica, Markus Seiler, Norman E. Davey, Niall J. Haslam, Robert J. Weatheritt, Aidan Budd, Tim Hughes, Jakub Pas, Leszek Rychlewski, Gilles Travé, Rein Aasland, Manuela Helmer-Citterich, Rune Linding, Toby J. Gibson

Nucleic Acids Res., 2010

2008

3D-Fun: predicting enzyme function from structure.

Marcin von Grotthuss, Dariusz Plewczynski, Gert Vriend, Leszek Rychlewski

Nucleic Acids Res., 2008

2007

eHiTS-to-VMD Interface Application. The Search for Tyrosine-tRNA Ligase Inhibitors.

Krystian Eitner, Tomasz Gaweda, Marcin Hoffmann, Miroslawa Jura, Leszek Rychlewski, Jan Barciszewski

J. Chem. Inf. Model., 2007

Evaluation of 3D-Jury on CASP7 models.

László Kaján, Leszek Rychlewski

BMC Bioinform., 2007

XtalPred: a web server for prediction of protein crystallizability.

Lukasz Slabinski, Lukasz Jaroszewski, Leszek Rychlewski, Ian A. Wilson, Scott A. Lesley, Adam Godzik

Bioinform., 2007

TOM - Task and Object Management for Grid Clusters.

Lukasz Slabinski, Adam Godzik, Leszek Rychlewski

Proceedings of the 2007 International Conference on Grid Computing & Applications, 2007

2006

Three dimensional model of severe acute respiratory syndrome coronavirus helicase ATPase catalytic domain and molecular design of severe acute respiratory syndrome coronavirus helicase inhibitors.

Marcin Hoffmann, Krystian Eitner, Marcin von Grotthuss, Leszek Rychlewski, Ewa Banachowicz, Tomasz Grabarkiewicz, Tomasz Szkoda, Andrzej Kolinski

J. Comput. Aided Mol. Des., 2006

PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics.

Marcin von Grotthuss, Dariusz Plewczynski, Krzysztof Ginalski, Leszek Rychlewski, Eugene I. Shakhnovich

BMC Bioinform., 2006

2005

FFAS03: a server for profile-profile sequence alignments.

Lukasz Jaroszewski, Leszek Rychlewski, Zhanwen Li, Weizhong Li, Adam Godzik

Nucleic Acids Res., 2005

AutoMotif server: prediction of single residue post-translational modifications in proteins.

Dariusz Plewczynski, Adrian Tkacz, Lucjan Stanislaw Wyrwicz, Leszek Rychlewski

Bioinform., 2005

2004

Detecting distant homology with Meta-BASIC.

Krzysztof Ginalski, Marcin von Grotthuss, Nick V. Grishin, Leszek Rychlewski

Nucleic Acids Res., 2004

Integrated web service for improving alignment quality based on segments comparison.

Dariusz Plewczynski, Leszek Rychlewski, Yuzhen Ye, Lukasz Jaroszewski, Adam Godzik

BMC Bioinform., 2004

The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries.

Daniel Fischer, Jakub Pas, Leszek Rychlewski

Bioinform., 2004

2003

ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins.

Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson

Nucleic Acids Res., 2003

Detection of reliable and unexpected protein fold predictions using 3D-Jury.

Krzysztof Ginalski, Leszek Rychlewski

Nucleic Acids Res., 2003

ORFeus: detection of distant homology using sequence profiles and predicted secondary structure.

Krzysztof Ginalski, Jakub Pas, Lucjan Stanislaw Wyrwicz, Marcin von Grotthuss, Janusz M. Bujnicki, Leszek Rychlewski

Nucleic Acids Res., 2003

Ligand-Info, Searching for Similar Small Compounds Using Index Profiles.

Marcin von Grotthuss, Jakub Pas, Leszek Rychlewski

Bioinform., 2003

3D-Jury: A Simple Approach to Improve Protein Structure Predictions.

Krzysztof Ginalski, Arne Elofsson, Daniel Fischer, Leszek Rychlewski

Bioinform., 2003

2002

RNA: (guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited - bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure.

Janusz M. Bujnicki, Leszek Rychlewski

BMC Bioinform., 2002

Fold-recognition detects an error in the Protein Data Bank.

Janusz M. Bujnicki, Leszek Rychlewski, Daniel Fischer

Bioinform., 2002

2001

A study of quality measures for protein threading models.

Susana Cristobal, Adam T. Zemla, Daniel Fischer, Leszek Rychlewski, Arne Elofsson

BMC Bioinform., 2001

mRNA: guanine-<i>N</i>7 cap methyltransferases: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships.

Janusz M. Bujnicki, Marcin Feder, Monika Radlinska, Leszek Rychlewski

BMC Bioinform., 2001

ToolShop: prerelease inspections for protein structure prediction servers.

Leszek Rychlewski

Bioinform., 2001

Structure prediction meta server.

Janusz M. Bujnicki, Arne Elofsson, Daniel Fischer, Leszek Rychlewski

Bioinform., 2001

2000

From Fold to Function Predictions: An Apoptosis Regulator Protein BID.

Krzysztof Pawlowski, Leszek Rychlewski, John C. Reed, Adam Godzik

Comput. Chem., 2000

MaxSub: an automated measure for the assessment of protein structure prediction quality.

Naomi Siew, Arne Elofsson, Leszek Rychlewski, Daniel Fischer

Bioinform., 2000