Lenore Cowen
Orcid: 0000-0001-6698-6413Affiliations:
- Tufts University, Medford, USA
According to our database1,
Lenore Cowen
authored at least 83 papers
between 1986 and 2024.
Collaborative distances:
Collaborative distances:
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Online presence:
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on zbmath.org
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on orcid.org
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on id.loc.gov
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on d-nb.info
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Bibliography
2024
Approximate IsoRank for Scalable and Functionally Meaningful Cross-Species Alignments of Protein Interaction Networks.
J. Comput. Biol., 2024
Proceedings of the Research in Computational Molecular Biology, 2024
2023
Investigating the effect of selective exposure, audience fragmentation, and echo-chambers on polarization in dynamic media ecosystems.
Appl. Netw. Sci., December, 2023
TT3D: Leveraging precomputed protein 3D sequence models to predict protein-protein interactions.
Bioinform., October, 2023
Proceedings of the Metadata and Semantic Research - 17th Research Conference, 2023
2022
Majority Vote Cascading: A Semi-Supervised Framework for Improving Protein Function Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
Bioinform., 2022
Database J. Biol. Databases Curation, 2022
Cognitive Cascades within Media Ecosystems: Simulating Fragmentation, Selective Exposure and Media Tactics to Investigate Polarization.
Proceedings of the Complex Networks and Their Applications XI, 2022
Proceedings of the CHI '22: CHI Conference on Human Factors in Computing Systems, New Orleans, LA, USA, 29 April 2022, 2022
Identifying Cognitive and Creative Support Needs for Remote Scientific Collaboration using VR: Practices, Affordances, and Design Implications.
Proceedings of the C&C '22: Creativity and Cognition, Venice, Italy, June 20 - 23, 2022, 2022
Combining spectral clustering and large cut algorithms to find compensatory functional modules from yeast physical and genetic interaction data with GLASS.
Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022
Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022
2021
Diffusion State Distances: Multitemporal Analysis, Fast Algorithms, and Applications to Biological Networks.
SIAM J. Math. Data Sci., 2021
CoRR, 2021
Bioinformatics of corals: Investigating heterogeneous omics data from coral holobionts for insight into reef health and resillience.
Proceedings of the Biocomputing 2021: Proceedings of the Pacific Symposium, 2021
Proceedings of the Metadata and Semantic Research - 15th International Conference, 2021
Random-Walk Based Approximate k-Nearest Neighbors Algorithm for Diffusion State Distance.
Proceedings of the Large-Scale Scientific Computing - 13th International Conference, 2021
2020
GLIDE: combining local methods and diffusion state embeddings to predict missing interactions in biological networks.
Bioinform., 2020
2018
Computing the diffusion state distance on graphs via algebraic multigrid and random projections.
Numer. Linear Algebra Appl., 2018
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018
2017
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017
2016
2015
MRFy: Remote Homology Detection for Beta-Structural Proteins Using Markov Random Fields and Stochastic Search.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
2014
New directions for diffusion-based network prediction of protein function: incorporating pathways with confidence.
Bioinform., 2014
2013
Genecentric: a package to uncover graph-theoretic structure in high-throughput epistasis data.
BMC Bioinform., 2013
2012
IEEE Computer Graphics and Applications, 2012
Formatt: Correcting Protein Multiple Structural Alignments by Incorporating Sequence Alignment.
BMC Bioinform., 2012
SMURFLite: combining simplified Markov random fields with simulated evolution improves remote homology detection for beta-structural proteins into the twilight zone.
Bioinform., 2012
Proceedings of the ACM International Conference on Bioinformatics, 2012
2011
Inferring Mechanisms of Compensation from E-MAP and SGA Data Using Local Search Algorithms for Max Cut.
J. Comput. Biol., 2011
Proceedings of the ACM International Conference on Bioinformatics, 2011
2010
Markov random fields reveal an N-terminal double beta-propeller motif as part of a bacterial hybrid two-component sensor system.
Proc. Natl. Acad. Sci. USA, 2010
Recognition of beta-structural motifs using hidden Markov models trained with simulated evolution.
Bioinform., 2010
Proceedings of the Bioinformatics Research and Applications, 6th International Symposium, 2010
2009
PLoS Comput. Biol., 2009
Augmented training of hidden Markov models to recognize remote homologs via simulated evolution.
Bioinform., 2009
2008
PLoS Comput. Biol., 2008
J. Comput. Syst. Sci., 2008
Proceedings of the Bioinformatics Research and Applications, 2008
2006
Proceedings of the Distributed Computing, 20th International Symposium, 2006
Proceedings of the SPAA 2006: Proceedings of the 18th Annual ACM Symposium on Parallelism in Algorithms and Architectures, Cambridge, Massachusetts, USA, July 30, 2006
Proceedings of the Eighth Workshop on Algorithm Engineering and Experiments, 2006
2005
Wrap-and-Pack: A New Paradigm for Beta Structural Motif Recognition with Application to Recognizing Beta Trefoils.
J. Comput. Biol., 2005
2004
Ann. Math. Artif. Intell., 2004
Wrap-and-pack: a new paradigm for beta structural motif recognition with application to recognizing beta trefoils.
Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004
2002
2001
2000
Proceedings of the Nineteenth Annual ACM Symposium on Principles of Distributed Computing, 2000
1999
Proceedings of the Tenth Annual ACM-SIAM Symposium on Discrete Algorithms, 1999
1998
Ann. Math. Artif. Intell., 1998
1997
Proceedings of the Eighth Annual ACM-SIAM Symposium on Discrete Algorithms, 1997
1996
J. Parallel Distributed Comput., 1996
Proceedings of the Fifteenth Annual ACM Symposium on Principles of Distributed Computing, 1996
1995
1994
Proceedings of the Twenty-Sixth Annual ACM Symposium on Theory of Computing, 1994
1993
Concurrence Probabilities for a Locally Slotted Packet Radio Network by Combinatorial Methods.
Perform. Evaluation, 1993
Near-Linear Cost Sequential and Distribured Constructions of Sparse Neighborhood Covers
Proceedings of the 34th Annual Symposium on Foundations of Computer Science, 1993
1992
Proceedings of the Eleventh Annual ACM Symposium on Principles of Distributed Computing, 1992
1991
Proceedings of the Second Annual ACM/SIGACT-SIAM Symposium on Discrete Algorithms, 1991
1989
Proceedings of the Advances in Cryptology, 1989
1986
Defective colorings of graphs in surfaces: Partitions into subgraphs of bounded valency.
J. Graph Theory, 1986