Lei Chen

Orcid: 0000-0003-3068-1583

Affiliations:
  • Shanghai Maritime University, China
  • Fudan University, China
  • East China Normal University, China


According to our database1, Lei Chen authored at least 37 papers between 2007 and 2024.

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Bibliography

2024
CMAGN: circRNA-miRNA association prediction based on graph attention auto-encoder and network consistency projection.
BMC Bioinform., December, 2024

Identification of key gene expression associated with quality of life after recovery from COVID-19.
Medical Biol. Eng. Comput., April, 2024

Identification of key genes associated with persistent immune changes and secondary immune activation responses induced by influenza vaccination after COVID-19 recovery by machine learning methods.
Comput. Biol. Medicine, February, 2024

PDATC-NCPMKL: Predicting drug's Anatomical Therapeutic Chemical (ATC) codes based on network consistency projection and multiple kernel learning.
Comput. Biol. Medicine, February, 2024

A Tale of Single-channel Electroencephalogram: Devices, Datasets, Signal Processing, Applications, and Future Directions.
CoRR, 2024

PMiSLocMF: predicting miRNA subcellular localizations by incorporating multi-source features of miRNAs.
Briefings Bioinform., 2024

Data-Driven Preference Sampling for Pareto Front Learning.
Proceedings of the International Joint Conference on Neural Networks, 2024

2023
RMTLysPTM: recognizing multiple types of lysine PTM sites by deep analysis on sequences.
Briefings Bioinform., November, 2023

2022
Identifying Protein Subcellular Locations With Embeddings-Based node2loc.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

2021
iMPTCE-Hnetwork: A Multilabel Classifier for Identifying Metabolic Pathway Types of Chemicals and Enzymes with a Heterogeneous Network.
Comput. Math. Methods Medicine, 2021

2020
Prediction of Drug Side Effects with a Refined Negative Sample Selection Strategy.
Comput. Math. Methods Medicine, 2020

iATC-NRAKEL: an efficient multi-label classifier for recognizing anatomical therapeutic chemical classes of drugs.
Bioinform., 2020

iATC-FRAKEL: a simple multi-label web server for recognizing anatomical therapeutic chemical classes of drugs with their fingerprints only.
Bioinform., 2020

Similarity-Based Machine Learning Model for Predicting the Metabolic Pathways of Compounds.
IEEE Access, 2020

2019
Recognizing Novel Tumor Suppressor Genes Using a Network Machine Learning Strategy.
IEEE Access, 2019

Identification of Human Membrane Protein Types by Incorporating Network Embedding Methods.
IEEE Access, 2019

Identifying Essential Signature Genes and Expression Rules Associated With Distinctive Development Stages of Early Embryonic Cells.
IEEE Access, 2019

2017
Machine learning and graph analytics in computational biomedicine.
Artif. Intell. Medicine, 2017

Analysis of cancer-related lncRNAs using gene ontology and KEGG pathways.
Artif. Intell. Medicine, 2017

Identify Key Sequence Features to Improve CRISPR sgRNA Efficacy.
IEEE Access, 2017

2016
A Novel Brain Networks Enhancement Model (BNEM) for BOLD fMRI Data Analysis With Highly Spatial Reproducibility.
IEEE J. Biomed. Health Informatics, 2016

k-Power domination in block graphs.
J. Comb. Optim., 2016

Identification of novel proliferative diabetic retinopathy related genes on protein-protein interaction network.
Neurocomputing, 2016

2015
Machine Learning and Network Methods for Biology and Medicine.
Comput. Math. Methods Medicine, 2015

Graphs with unique minimum paired-dominating set.
Ars Comb., 2015

2014
Novel Computational Methods and Tools in Biomedicine and Biopharmacy.
Comput. Math. Methods Medicine, 2014

2012
NP-completeness and APX-completeness of restrained domination in graphs.
Theor. Comput. Sci., 2012

Vertices in all minimum paired-dominating sets of block graphs.
J. Comb. Optim., 2012

2011
Predicting triplet of transcription factor - mediating enzyme - target gene by functional profiles.
Neurocomputing, 2011

2010
Labelling algorithms for paired-domination problems in block and interval graphs.
J. Comb. Optim., 2010

Prediction of interactiveness between small molecules and enzymes by combining gene ontology and compound similarity.
J. Comput. Chem., 2010

Predicting the network of substrate-enzyme-product triads by combining compound similarity and functional domain composition.
BMC Bioinform., 2010

2009
Distance paired-domination problems on subclasses of chordal graphs.
Theor. Comput. Sci., 2009

Hardness results and approximation algorithms for (weighted) paired-domination in graphs.
Theor. Comput. Sci., 2009

Multiple classifier integration for the prediction of protein structural classes.
J. Comput. Chem., 2009

A linear-time algorithm for paired-domination problem in strongly chordal graphs.
Inf. Process. Lett., 2009

2007
Extremal problems on consecutive L(2, 1)-labelling.
Discret. Appl. Math., 2007


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