Lee A. D. Cooper
Orcid: 0000-0002-3504-4965Affiliations:
- Northwestern University, Feinberg School of Medicine, Chicago, IL, USA
- Emory University, Department of Biomedical Informatics, Atlanta, GA, USA
- Ohio State University, Department of Biomedical Informatics, Columbus, OH, USA (PhD 2009)
According to our database1,
Lee A. D. Cooper
authored at least 57 papers
between 2006 and 2024.
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Bibliography
2024
Medical Image Anal., 2024
Novel Clinical-Grade Prostate Cancer Detection and Grading Model: Development and Prospective Validation Using Real World Data, with Performance Assessment on IHC Requested Cases.
CoRR, 2024
BraTS-Path Challenge: Assessing Heterogeneous Histopathologic Brain Tumor Sub-regions.
CoRR, 2024
Comput. Medical Imaging Graph., 2024
2023
Deep Gaussian Processes for Classification With Multiple Noisy Annotators. Application to Breast Cancer Tissue Classification.
IEEE Access, 2023
Deep learning to predict the proportion of positive cells in CMYC-stained tissue microarrays of diffuse large B-cell lymphoma.
Proceedings of the Medical Imaging 2023: Digital and Computational Pathology, 2023
Crowdsourcing Segmentation of Histopathological Images Using Annotations Provided by Medical Students.
Proceedings of the Artificial Intelligence in Medicine, 2023
2022
Explainable nucleus classification using Decision Tree Approximation of Learned Embeddings.
Bioinform., 2022
2021
A Histopathology Study Comparing Contrastive Semi-Supervised and Fully Supervised Learning.
CoRR, 2021
NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation.
CoRR, 2021
2020
CoRR, 2020
2019
Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization.
npj Digit. Medicine, 2019
Bioinform., 2019
Joint region and nucleus segmentation for characterization of tumor infiltrating lymphocytes in breast cancer.
Proceedings of the Medical Imaging 2019: Digital Pathology, 2019
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
2018
The OncoPPi Portal: an integrative resource to explore and prioritize protein-protein interactions for cancer target discovery.
Bioinform., 2018
Vectorized persistent homology representations for characterizing glandular architecture in histology images.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018
2017
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017
2016
Proceedings of the AMIA 2016, 2016
2015
Scalable analysis of Big pathology image data cohorts using efficient methods and high-performance computing strategies.
BMC Bioinform., 2015
Proceedings of the 2015 IEEE International Conference on Big Data (IEEE BigData 2015), Santa Clara, CA, USA, October 29, 2015
Spatiotemporal visualization of cell membrane dynamics and protein colocalization reveals correlation between membrane dynamics and metastatic invasion.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015
2014
Region templates: Data representation and management for high-throughput image analysis.
Parallel Comput., 2014
CoRR, 2014
Comparative Performance Analysis of Intel (R) Xeon Phi (TM), GPU, and CPU: A Case Study from Microscopy Image Analysis.
Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014
2013
Parallel Comput., 2013
Research and applications: Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data.
J. Am. Medical Informatics Assoc., 2013
Feature-based analysis of large-scale spatio-temporal sensor data on hybrid architectures.
Int. J. High Perform. Comput. Appl., 2013
High-throughput Analysis of Large Microscopy Image Datasets on CPU-GPU Cluster Platforms.
Proceedings of the 27th IEEE International Symposium on Parallel and Distributed Processing, 2013
High-performance computational analysis of glioblastoma pathology images with database support identifies molecular and survival correlates.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013
2012
Integrated morphologic analysis for the identification and characterization of disease subtypes.
J. Am. Medical Informatics Assoc., 2012
High-throughput Execution of Hierarchical Analysis Pipelines on Hybrid Cluster Platforms
CoRR, 2012
Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium, 2012
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012
High Performance Computing for Integrative Analysis of Large Pathology Image Datasets.
Proceedings of the AMIA 2012, 2012
2011
Integrative, Multimodal Analysis of Glioblastoma Using TCGA Molecular Data, Pathology Images, and Clinical Outcomes.
IEEE Trans. Biomed. Eng., 2011
Proceedings of the Medical Imaging 2011: Image Processing, 2011
A comprehensive framework for classification of nuclei in digital microscopy imaging: An application to diffuse gliomas.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011
Parallel Automatic Registration of Large Scale Microscopic Images on Multiprocessor CPUs and GPUs.
Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011
Acceleration of Two Point Correlation Function Calculation for Pathology Image Segmentation.
Proceedings of the 2011 IEEE International Conference on Healthcare Informatics, 2011
In silico analysis of nuclei in glioblastoma using large-scale microscopy images improves prediction of treatment response.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011
Towards building computerized image analysis framework for nucleus discrimination in microscopy images of diffuse glioma.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011
2010
IEEE Trans. Biomed. Eng., 2010
Proceedings of the Applied Parallel and Scientific Computing, 2010
Texture based image recognition in microscopy images of diffuse gliomas with multi-class gentle boosting mechanism.
Proceedings of the IEEE International Conference on Acoustics, 2010
Proceedings of the Data Integration in the Life Sciences, 7th International Conference, 2010
Two-point correlation as a feature for histology images: Feature space structure and correlation updating.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2010
2009
J. Signal Process. Syst., 2009
Feature-based registration of histopathology images with different stains: An application for computerized follicular lymphoma prognosis.
Comput. Methods Programs Biomed., 2009
2008
IEEE Trans. Vis. Comput. Graph., 2008
An imaging workflow for characterizing phenotypical change in large histological mouse model datasets.
J. Biomed. Informatics, 2008
2006
Proceedings of the Dynamical Vision, ICCV 2005 and ECCV 2006 Workshops, 2006