Le Sy Vinh

According to our database, Le Sy Vinh authored at least 26 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

QMix: An Efficient Program to Automatically Estimate Multi-Matrix Mixture Models for Amino Acid Substitution Process.

Nguyen Huy Tinh, Cuong Cao Dang, Le Sy Vinh

J. Comput. Biol., 2024

2023

Rooting Phylogenetic Trees from Protein Alignments.

Tinh H. Nguyen, Cuong Cao Dang, Le Sy Vinh

Proceedings of the 15th International Conference on Knowledge and Systems Engineering, 2023

Welcome Message from the KSE 2023 General Committee.

Nguyen Le Minh, Le Sy Vinh, Bui Thu Lam

Proceedings of the 15th International Conference on Knowledge and Systems Engineering, 2023

2022

A protein secondary structure-based algorithm for partitioning large protein alignments.

Thu Kim Le, Le Sy Vinh

Proceedings of the 14th International Conference on Knowledge and Systems Engineering, 2022

2021

fastTIGER: A rapid method for estimating evolutionary rates of sites from large datasets.

Thu Kim Le, Le Sy Vinh

Proceedings of the 13th International Conference on Knowledge and Systems Engineering, 2021

2020

A protein alignment partitioning method for protein phylogenetic inference.

Thu Le Kim, Le Sy Vinh

Proceedings of the 2020 RIVF International Conference on Computing and Communication Technologies, 2020

iK-means: an improvement of the iterative k-means partitioning algorithm.

Thu Kim Le, Le Sy Vinh, Dong Do Due, Bui Ngoc Thang, Thao Thi Phuong Nguyen

Proceedings of the 12th International Conference on Knowledge and Systems Engineering, 2020

pQMaker: empirically estimating amino acid substitution models in a parallel environment.

Nguyen Duc Canh, Cuong Cao Dang, Le Sy Vinh, Bui Quang Minh, Diep Thi Hoang

Proceedings of the 12th International Conference on Knowledge and Systems Engineering, 2020

2019

A Hybrid Approach to Optimize the Number of Recombinations in Ancestral Recombination Graphs.

Nguyen Thi Phuong Thao, Le Sy Vinh

Proceedings of the 9th International Conference on Bioscience, 2019

2018

Building a Specific Amino Acid Substitution Model for Dengue Viruses.

Thu Le Kim, Cuong Cao Dang, Le Sy Vinh

Proceedings of the 10th International Conference on Knowledge and Systems Engineering, 2018

2017

Building Ancestral Recombination Graphs for Whole Genomes.

Thao Thi Phuong Nguyen, Le Sy Vinh, Hai Bich Ho, Si Quang Le

IEEE ACM Trans. Comput. Biol. Bioinform., 2017

Genomedics: Whole exome analysis system for clinical studies.

Le Sy Vinh, Nguyen Duc Canh, Bui Ngoc Thang, Do Thi Thu Hang, Duong Quoc Chinh, Tran Cong Hoang, Le Ba Hong Minh, Pham Thi Dieu Linh

Proceedings of the 9th International Conference on Knowledge and Systems Engineering, 2017

2016

Preface KSE 2016.

Minh Le Nguyen, Le Sy Vinh, Yew-Soon Ong, Lam Thu Bui, Keiji Hirata

Proceedings of the 2016 Eighth International Conference on Knowledge and Systems Engineering, 2016

A new phylogenetic tree sampling method for maximum parsimony bootstrapping and proof-of-concept implementation.

Diep Thi Hoang, Le Sy Vinh, Tomás Flouri, Alexandros Stamatakis, Arndt von Haeseler, Bui Quang Minh

Proceedings of the 2016 Eighth International Conference on Knowledge and Systems Engineering, 2016

2015

Building Population-Specific Reference Genomes: A Case Study of Vietnamese Reference Genome.

Nguyen Dai Thanh, Pham Thi Minh Trang, Dang Thanh Hai, Nguyen Ha Anh Tuan, Si Quang Le, Bui Quang Minh, Quang Minh Dao, Pham Bao Son, Le Sy Vinh

Proceedings of the 2015 Seventh International Conference on Knowledge and Systems Engineering, 2015

MVRM: A Hybrid Approach to Predict siRNA Efficacy.

Bui Ngoc Thang, Le Sy Vinh, Ho Tu Bao

Proceedings of the 2015 Seventh International Conference on Knowledge and Systems Engineering, 2015

2014

FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets.

Cuong Cao Dang, Le Sy Vinh, Olivier Gascuel, Bart Hazes, Si Quang Le

BMC Bioinform., 2014

2012

A Maximum Likelihood Method for Detecting Bad Samples from Illumina BeadChips Data.

Ha Anh Tuan Nguyen, Le Sy Vinh, Si Quang Le

Proceedings of the Fourth International Conference on Knowledge and Systems Engineering, 2012

Detecting Bad SNPs from Illumina BeadChips Using Jeffreys Distance.

Son Hoang Nguyen, Le Sy Vinh, Si Quang Le

Proceedings of the Fourth International Conference on Knowledge and Systems Engineering, 2012

2011

ReplacementMatrix: a web server for maximum-likelihood estimation of amino acid replacement rate matrices.

Cuong Cao Dang, Vincent Lefort, Le Sy Vinh, Si Quang Le, Olivier Gascuel

Bioinform., 2011

Protein Type Specific Amino Acid Substitution Models for Influenza Viruses.

Nguyen Van Sau, Cuong Cao Dang, Si Quang Le, Le Sy Vinh

Proceedings of the Third International Conference on Knowledge and Systems Engineering, 2011

A Fast and Efficient Method for Estimating Amino Acid Substitution Models.

Van Dat Le, Cuong Cao Dang, Si Quang Le, Le Sy Vinh

Proceedings of the Third International Conference on Knowledge and Systems Engineering, 2011

2006

Association-Based Dissimilarity Measures for Categorical Data: Limitation and Improvement.

Si Quang Le, Tu Bao Ho, Le Sy Vinh

Proceedings of the Advances in Knowledge Discovery and Data Mining, 2006

2005

Shortest triplet clustering: reconstructing large phylogenies using representative sets.

Le Sy Vinh, Arndt von Haeseler

BMC Bioinform., 2005

pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies.

Bui Quang Minh, Le Sy Vinh, Arndt von Haeseler, Heiko A. Schmidt

Bioinform., 2005

2004

PhyNav: A Novel Approach to Reconstruct Large Phylogenies.

Le Sy Vinh, Heiko A. Schmidt, Arndt von Haeseler

Proceedings of the Classification, 2004