Laxmi Parida
Orcid: 0000-0002-7872-5074Affiliations:
- IBM Research, T. J. Watson Research Center, Yorktown Heights, USA
According to our database1,
Laxmi Parida
authored at least 122 papers
between 1991 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
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Online presence:
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on zbmath.org
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on orcid.org
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on id.loc.gov
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on dl.acm.org
On csauthors.net:
Bibliography
2024
Towards quantum computing for clinical trial design and optimization: A perspective on new opportunities and challenges.
CoRR, 2024
MaSk-LMM: A Matrix Sketching Framework for Linear Mixed Models in Association Studies.
Proceedings of the Research in Computational Molecular Biology, 2024
2023
Briefings Bioinform., March, 2023
2022
Epidemiological topology data analysis links severe COVID-19 to RAAS and hyperlipidemia associated metabolic syndrome conditions.
Proceedings of the AMIA 2022, 2022
2021
Inferring COVID-19 Biological Pathways from Clinical Phenotypes via Topological Analysis.
CoRR, 2021
Algorithms, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
2020
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data.
CoRR, 2020
A Topological Data Analysis Approach on Predicting Phenotypes from Gene Expression Data.
Proceedings of the Algorithms for Computational Biology, 2020
2019
Linear Time Algorithms to Construct Populations Fitting Multiple Constraint Distributions at Genomic Scales.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019
PLoS Comput. Biol., 2019
Signal enrichment with strain-level resolution in metagenomes using topological data analysis.
BMC Genom., 2019
Bioinform., 2019
2018
IEEE ACM Trans. Comput. Biol. Bioinform., 2018
Proceedings of the 18th International Workshop on Algorithms in Bioinformatics, 2018
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2018
2017
IPED2: Inheritance Path Based Pedigree Reconstruction Algorithm for Complicated Pedigrees.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
MUSE: A Multi-locus Sampling-based Epistasis Algorithm for Quantitative Genetic Trait Prediction.
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017
A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2017
2016
MINT: Mutual Information Based Transductive Feature Selection for Genetic Trait Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2016
IBM J. Res. Dev., 2016
Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis.
BMC Syst. Biol., 2016
Does encoding matter? A novel view on the quantitative genetic trait prediction problem.
BMC Bioinform., 2016
Novel applications of multitask learning and multiple output regression to multiple genetic trait prediction.
Bioinform., 2016
Sampling ARG of multiple populations under complex configurations of subdivision and admixture.
Bioinform., 2016
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2016
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016
2015
BMC Bioinform., January, 2015
BMC Bioinform., 2015
Proceedings of the Research in Computational Molecular Biology, 2015
MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction.
Proceedings of the Bioinformatics Research and Applications - 11th International Symposium, 2015
Proceedings of the Distributed Computing and Internet Technology, 2015
Performance evaluation of different encoding strategies for quantitative genetic trait prediction.
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015
SAME: a sampling-based multi-locus epistasis algorithm for quantitative genetic trait prediction.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015
2014
Effect of sampling on the extent and accuracy of the inferred genetic history of recombining genome.
Comput. Biol. Chem., 2014
Entropic Profiles, Maximal Motifs and the Discovery of Significant Repetitions in Genomic Sequences.
Proceedings of the Algorithms in Bioinformatics - 14th International Workshop, 2014
Best-Fit in Linear Time for Non-generative Population Simulation - (Extended Abstract).
Proceedings of the Algorithms in Bioinformatics - 14th International Workshop, 2014
Proceedings of the 2014 SIAM International Conference on Data Mining, 2014
2013
J. Comput. Biol., 2013
ICT Strategies for Bridging Biology and Precision Medicine (Dagstuhl Perspectives Workshop 13342).
Dagstuhl Reports, 2013
Dagstuhl Manifestos, 2013
MINT: Mutual Information based Transductive Feature Selection for Genetic Trait Prediction.
CoRR, 2013
Sum of parts is greater than the whole: inference of common genetic history of populations.
BMC Genom., 2013
Algorithms Mol. Biol., 2013
Efficient <i>in silico</i> Chromosomal Representation of Populations via Indexing Ancestral Genomes.
Algorithms, 2013
Proceedings of the Nature of Computation. Logic, Algorithms, Applications, 2013
Proceedings of the Models and Algorithms for Genome Evolution, 2013
2012
Structure Discovery in Biology: Motifs, Networks & Phylogenies (Dagstuhl Seminar 12291).
Dagstuhl Reports, 2012
Proceedings of the String Processing and Information Retrieval, 2012
2011
Experiences with mining temporal event sequences from electronic medical records: initial successes and some challenges.
Proceedings of the 17th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2011
2010
IEEE ACM Trans. Comput. Biol. Bioinform., 2010
PLoS Comput. Biol., 2010
Ancestral Recombinations Graph: A Reconstructability Perspective Using Random-Graphs Framework.
J. Comput. Biol., 2010
APBC 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore, India, 18-21 January 2010.
BMC Bioinform., 2010
Proceedings of the Bioinformatics Research and Applications, 6th International Symposium, 2010
10231 Abstracts Collection - Structure Discovery in Biology: Motifs, Networks & Phylogenies.
Proceedings of the Structure Discovery in Biology: Motifs, Networks & Phylogenies, 06.06., 2010
Proceedings of the Canadian Conference on Computer Science & Software Engineering, 2010
2009
BMC Bioinform., 2009
2008
Estimating the Ancestral Recombinations Graph (ARG) as Compatible Networks of SNP Patterns.
J. Comput. Biol., 2008
2007
J. Comput. Biol., 2007
PROTERAN: animated terrain evolution for visual analysis of patterns in protein folding trajectory.
Bioinform., 2007
Proceedings of 5th Asia-Pacific Bioinformatics Conference, 2007
2006
Algorithms Mol. Biol., 2006
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006
Proceedings of the Research in Computational Molecular Biology, 2006
Proceedings of the Comparative Genomics, 2006
Proceedings of the Pattern Recognition in Bioinformatics, International Workshop, 2006
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
2005
Theor. Comput. Sci., 2005
Combinatorial Pattern Discovery Approach for the Folding Trajectory Analysis of a <i>β</i>-Hairpin.
PLoS Comput. Biol., 2005
J. Comput. Biol., 2005
Electron. Notes Discret. Math., 2005
Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005
Proceedings of the 2005 Data Compression Conference (DCC 2005), 2005
Proceedings of the Combinatorial Pattern Matching, 16th Annual Symposium, 2005
Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005
Proceedings of the Proceedings, 2005
2004
Proceedings of the 2004 Data Compression Conference (DCC 2004), 2004
2003
Nucleic Acids Res., 2003
Proceedings of the Algorithms in Bioinformatics, Third International Workshop, 2003
Proceedings of the 2003 Data Compression Conference (DCC 2003), 2003
2001
IBM J. Res. Dev., 2001
IBM J. Res. Dev., 2001
Proceedings of the Combinatorial Pattern Matching, 12th Annual Symposium, 2001
2000
Partitioning single-molecule maps into multiple populations: algorithms and probabilistic analysis.
Discret. Appl. Math., 2000
Pattern discovery on character sets and real-valued data: linear bound on irredundant motifs and an efficient polynomial time algorithm.
Proceedings of the Eleventh Annual ACM-SIAM Symposium on Discrete Algorithms, 2000
Proceedings of the Combinatorial Pattern Matching, 11th Annual Symposium, 2000
1999
An Approximation Algorithm for Alignment of Multiple Sequences using Motif Discovery.
J. Comb. Optim., 1999
Mass Estimation of DNA Molecules and Extraction of Ordered Restriction Maps in Optical Mapping Imagery.
Algorithmica, 1999
Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, 1999
Building Dictionaries of 1D and 3D Motifs by Mining the Unaligned 1D Sequences of 17 Archaeal and Bacterial Genomes.
Proceedings of the Seventh International Conference on Intelligent Systems for Molecular Biology, 1999
1998
IEEE Trans. Pattern Anal. Mach. Intell., 1998
Partitioning <i>K</i> clones: hardness results and practical algorithms for the <i>K-populations problem</i>.
Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, 1998
1997
Towards constructing physical maps by optical mapping (extended abstract): an effective, simple, combinatorial approach.
Proceedings of the First Annual International Conference on Research in Computational Molecular Biology, 1997
Proceedings of the Energy Minimization Methods in Computer Vision and Pattern Recognition, 1997
1996
Proceedings of the 1996 Conference on Computer Vision and Pattern Recognition (CVPR '96), 1996
1995
Comput. Aided Des., 1995
1994
1993
Comput. Graph., 1993
Comput. Aided Des., 1993
Vinyas: An Interactive Calligraphic Type Design System.
Proceedings of the Graphics, Design and Visualization, Proceedings of the IFIP TC5/WG5.2/WG5.10 CSI International Conference on Computer Graphics, 1993
1991
A closed form solution to the problem of tangential circles, lines, points with extension to 3D.
Comput. Graph., 1991