Laura Elnitski

According to our database, Laura Elnitski authored at least 20 papers between 2003 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Characterization and clustering of kinase isoform expression in metastatic melanoma.

David O. Holland, Valer Gotea, Kevin Fedkenheuer, Sushil K. Jaiswal, Catherine Baugher, Hua Tan, Michael Fedkenheuer, Laura Elnitski

PLoS Comput. Biol., 2022

2019

Aberrant DNA methylation defines isoform usage in cancer, with functional implications.

Yun-Ching Chen, Laura Elnitski

PLoS Comput. Biol., 2019

2018

Discovering Gene Regulatory Elements Using Coverage-Based Heuristics.

Rami Al-ouran, Robert Schmidt, Ashwini Naik, Jeffrey Jones, Frank Drews, David W. Juedes, Laura Elnitski, Lonnie R. Welch

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2017

Significant associations between driver gene mutations and DNA methylation alterations across many cancer types.

Yun-Ching Chen, Valer Gotea, Gennady Margolin, Laura Elnitski

PLoS Comput. Biol., 2017

SigSeeker: a peak-calling ensemble approach for constructing epigenetic signatures.

Jens Lichtenberg, Laura Elnitski, David M. Bodine

Bioinform., 2017

2014

Orthology-driven mapping of bidirectional promoters in human and mouse genomes.

Mary Qu Yang, Laura Elnitski

BMC Bioinform., 2014

2010

WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures.

Jens Lichtenberg, Kyle Kurz, Xiaoyu Liang, Rami Al-ouran, Lev Neiman, Lee J. Nau, Joshua D. Welch, Edwin Jacox, Thomas Bitterman, Klaus Ecker, Laura Elnitski, Frank Drews, Stephen Lee, Lonnie R. Welch

BMC Bioinform., 2010

Regulatory network nodes of <i>check point factors</i> in DNA repair pathways.

Laura Elnitski, Jens Lichtenberg, Lonnie R. Welch

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2008

Comparative analyses of bidirectional promoters in vertebrates.

Mary Qu Yang, James Taylor, Laura Elnitski

BMC Bioinform., 2008

Word-Based Characterization of the Bidirectional Promoters from the Human DNA-Repair Pathway.

Jens Lichtenberg, Edwin Jacox, Mary Qu Yang, Laura Elnitski, Lonnie R. Welch

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2007

New Frontiers in Computational Genomics: Identification of Novel Functional Elements and Genome-scale Pattern Analysis.

Laura Elnitski, Lonnie R. Welch

Scalable Comput. Pract. Exp., 2007

Comprehensive Annotation of Bidirectional Promoters Identifies Co-Regulation among Breast and Ovarian Cancer Genes.

Mary Qu Yang, Laura M. Koehly, Laura Elnitski

PLoS Comput. Biol., 2007

Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome.

Mary Qu Yang, Laura Elnitski

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

Rigorous Mapping of Orthologous Bidirectional Promoters in Vertebrates Defines their Evolutionary History.

Mary Qu Yang, James Taylor, Laura Elnitski

Proceedings of the Proceeding of the Second International Multi-Symposium of Computer and Computational Sciences (IMSCCS 2007), 2007

Orthology and Multiple Class Prediction of Functional Elements in the Human Genome.

Mary Qu Yang, Laura Elnitski

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

An Overview of Bidirectional Promoters.

Mary Qu Yang, Laura Elnitski

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Promoter studies in the human genome: one perspective on an unfinished story.

Mary Qu Yang, Laura Elnitski

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

2006

Clustering of gene locations.

Eli Walters, Naomi S. Altman, Laura Elnitski

Comput. Stat. Data Anal., 2006

2005

Improvements to GALA and dbERGE II: databases featuring genomic sequence alignment, annotation and experimental results.

Laura Elnitski, Belinda Giardine, Prachi Shah, Yi Zhang, Cathy Riemer, Matthew T. Weirauch, Richard Burhans, Webb Miller, Ross C. Hardison

Nucleic Acids Res., 2005

2003

MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequences.

Scott Schwartz, Laura Elnitski, Mei Li, Matthew T. Weirauch, Cathy Riemer, Arian Smit, Eric D. Green, Ross C. Hardison, Webb Miller

Nucleic Acids Res., 2003