Lars Keld Nielsen

According to our database, Lars Keld Nielsen authored at least 9 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

LooplessFluxSampler: an efficient toolbox for sampling the loopless flux solution space of metabolic models.

Pedro A. Saa, Sebastian Zapararte, Christopher C. Drovandi, Lars Keld Nielsen

BMC Bioinform., December, 2024

2022

The topology of genome-scale metabolic reconstructions unravels independent modules and high network flexibility.

Verónica S. Martínez, Pedro A. Saa, Jason Jooste, Kanupriya Tiwari, Lake-Ee Quek, Lars Keld Nielsen

PLoS Comput. Biol., 2022

2021

multiTFA: a Python package for multi-variate thermodynamics-based flux analysis.

Vishnuvardhan Mahamkali, Tim McCubbin, Moritz Emanuel Beber, Elad Noor, Esteban Marcellin, Lars Keld Nielsen

Bioinform., 2021

2016

Fast-SNP: a fast matrix pre-processing algorithm for efficient loopless flux optimization of metabolic models.

Pedro A. Saa, Lars Keld Nielsen

Bioinform., 2016

ll-ACHRB: a scalable algorithm for sampling the feasible solution space of metabolic networks.

Pedro A. Saa, Lars Keld Nielsen

Bioinform., 2016

2015

A General Framework for Thermodynamically Consistent Parameterization and Efficient Sampling of Enzymatic Reactions.

Pedro A. Saa, Lars Keld Nielsen

PLoS Comput. Biol., 2015

2014

A depth-first search algorithm to compute elementary flux modes by linear programming.

Lake-Ee Quek, Lars Keld Nielsen

BMC Syst. Biol., 2014

Extracting reaction networks from databases-opening Pandora's box.

Liam G. Fearnley, Melissa J. Davis, Mark A. Ragan, Lars Keld Nielsen

Briefings Bioinform., 2014

Towards a Large Integrated Model of Signal Transduction and Gene Regulation Events in Mammalian Cells.

Liam G. Fearnley, Mark A. Ragan, Lars Keld Nielsen

Proceedings of the BIOINFORMATICS 2014, 2014