Prediction of lncRNA-disease associations by integrating diverse heterogeneous information sources with RWR algorithm and positive pointwise mutual information. - Xiao-Nan Fan 001; Shao-Wu Zhang 001; Song-Yao Zhang; Kunju Zhu; Songjian Lu (BMC Bioinform., 2019)

Integrating data and knowledge to identify functional modules of genes: a multilayer approach. - Lifan Liang; Vicky Chen; Kunju Zhu; Xiaonan Fan 001; Xinghua Lu; Songjian Lu (BMC Bioinform., 2019)

BEM: Mining Coregulation Patterns in Transcriptomics via Boolean Matrix Factorization. - Lifan Liang; Kunju Zhu; Songjian Lu (Bioinform., 2020)

ORN: Inferring patient-specific dysregulation status of pathway modules in cancer with OR-gate Network. - Lifan Liang; Kunju Zhu; Junyan Tao; Songjian Lu (PLoS Comput. Biol., 2021)