Kristina M. Hettne

According to our database, Kristina M. Hettne authored at least 30 papers between 2008 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

How to automatically turn patient experience free-text responses into actionable insights: a natural language programming (NLP) approach.

Simone A. Cammel, Marit S. De Vos, Daphne van Soest, Kristina M. Hettne, Fred Boer, Ewout W. Steyerberg, Hileen Boosman

BMC Medical Informatics Decis. Mak., 2020

FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources.

Hana Pergl Sustkova, Kristina Maria Hettne, Peter Wittenburg, Annika Jacobsen, Tobias Kuhn, Robert Pergl, Jan Slifka, Peter McQuilton, Barbara Magagna, Susanna-Assunta Sansone, Markus Stocker, Melanie Imming, Larry Lannom, Mark A. Musen, Erik Schultes

Data Intell., 2020

FAIR Principles: Interpretations and Implementation Considerations.

Annika Jacobsen, Ricardo de Miranda Azevedo, Nick S. Juty, Dominique Batista, Simon J. Coles, Ronald Cornet, Mélanie Courtot, Mercè Crosas, Michel Dumontier, Chris T. A. Evelo, Carole A. Goble, Giancarlo Guizzardi, Karsten Kryger Hansen, Ali Hasnain, Kristina M. Hettne, Jaap Heringa, Rob W. W. Hooft, Melanie Imming, Keith G. Jeffery, Rajaram Kaliyaperumal, Martijn G. Kersloot, Christine R. Kirkpatrick, Tobias Kuhn, Ignasi Labastida, Barbara Magagna, Peter McQuilton, Natalie Meyers, Annalisa Montesanti, Mirjam van Reisen, Philippe Rocca-Serra, Robert Pergl, Susanna-Assunta Sansone, Luiz Olavo Bonino da Silva Santos, Juliane Schneider, George O. Strawn, Mark Thompson, Andra Waagmeester, Tobias Weigel, Mark D. Wilkinson, Egon L. Willighagen, Peter Wittenburg, Marco Roos, Barend Mons, Erik Schultes

Data Intell., 2020

From FAIR Leading Practices to FAIR Implementation and Back: An Inclusive Approach to FAIR at Leiden University Libraries.

Kristina Maria Hettne, Peter Verhaar, Erik Schultes, Laurents Sesink

Data Sci. J., 2020

Simultaneous Enrichment Analysis of all Possible Gene-sets: Unifying Self-Contained and Competitive Methods.

Mitra Ebrahimpoor, Pietro Spitali, Kristina M. Hettne, Roula Tsonaka, Jelle J. Goeman

Briefings Bioinform., 2020

Reusable FAIR Implementation Profiles as Accelerators of FAIR Convergence.

Erik Schultes, Barbara Magagna, Kristina Maria Hettne, Robert Pergl, Marek Suchánek, Tobias Kuhn

Proceedings of the Advances in Conceptual Modeling, 2020

2019

The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data.

Peter Wittenburg, Hana Pergl Sustkova, Annalisa Montesanti, Margreet Bloemers, S. H. de Waard, Mark A. Musen, John Graybeal, Kristina M. Hettne, Annika Jacobsen, Robert Pergl, Rob W. W. Hooft, Christine Staiger, Celia W. G. van Gelder, Sebastiaan L. Knijnenburg, A. C. van Arkel, Bert Meerman, Mark D. Wilkinson, Susanna-Assunta Sansone, Philippe Rocca-Serra, Peter McQuilton, Alejandra N. González-Beltrán, G. J. C. Aben, Patrícia Henning, Maria Simone de Menezes Alencar, C. Ribeiro, C. R. L. Silva, Luís Fernando Sayão, Luana Sales, Viviane Veiga, Jefferson Lima, Simone Dib, Paula Xavier dos Santos, R. Murtinho, Jakob Tendel, B. F. Schaap, P. M. Brouwer, A. K. Gavai, Yamine Bouzembrak, Hans J. P. Marvin, Albert Mons, Tobias Kuhn, Alessa A. Gambardella, Ricardo de Miranda Azevedo, Vesa Muhonen, Mira van der Naald, N. W. Smit, M. J. Buys, Taco F. de Bruin, Fieke Schoots, H. J. E. Goodson, Henry S. Rzepa, Keith G. Jeffery, Hugh P. Shanahan, M. Axton, Veniamin Tkachenko, Anne Deslattes Mays, Natalie Meyers, Michael Conlon, Laurel L. Haak, Erik A. Schultes

CoRR, 2019

2017

Semantic Knowledge Graph Network Features for Drug Repurposing.

Tareq B. Malas, Roman Kudrin, Sergei Starikov, Dorien Peters, Marco Roos, Peter A. C. 't Hoen, Kristina M. Hettne

Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017), 2017

2016

Chemical entity recognition in patents by combining dictionary-based and statistical approaches.

Saber A. Akhondi, Ewoud Pons, Zubair Afzal, Herman van Haagen, Benedikt F. H. Becker, Kristina M. Hettne, Erik M. van Mulligen, Jan A. Kors

Database J. Biol. Databases Curation, 2016

2015

Using a suite of ontologies for preserving workflow-centric research objects.

Khalid Belhajjame, Jun Zhao, Daniel Garijo, Matthew Gamble, Kristina M. Hettne, Raúl Palma, Eleni Mina, Óscar Corcho, José Manuél Gómez-Pérez, Sean Bechhofer, Graham Klyne, Carole A. Goble

J. Web Semant., 2015

Recognition of chemical entities: combining dictionary-based and grammar-based approaches.

Saber A. Akhondi, Kristina M. Hettne, Eelke van der Horst, Erik M. van Mulligen, Jan A. Kors

J. Cheminformatics, 2015

Nanopublications for exposing experimental data in the life-sciences: a Huntington's Disease case study.

Eleni Mina, Mark Thompson, Rajaram Kaliyaperumal, Jun Zhao, Eelke van der Horst, Zuotian Tatum, Kristina M. Hettne, Erik A. Schultes, Barend Mons, Marco Roos

J. Biomed. Semant., 2015

Finding Novel Associations Across Domains Using Linked Data: a Case Study on Genetic Variants Disrupting Transcription Start Sites.

Eelke van der Horst, Rajaram Kaliyaperumal, Zuotian Tatum, Mark Thompson, Erik A. Schultes, Eleni Mina, Ivo Fokkema, Johan T. den Dunnen, Marco Roos, Jeroen F. J. Laros, Barend Mons, Kristina M. Hettne, Peter A. C. 't Hoen

Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015

Multidisciplinary Collaboration to Facilitate Hypotheses Generation in Huntington's Disease.

Eleni Mina, Mark Thompson, Kristina M. Hettne, Willeke M. C. van Roon-Mom, Rajaram Kaliyaperumal, Eelke van der Horst, Katherine Wolstencroft, Barend Mons, Marco Roos

Proceedings of the 11th IEEE International Conference on e-Science, 2015

2014

Explain your data by Concept Profile Analysis Web Services.

Kristina M. Hettne, Reinout van Schouwen, Eleni Mina, Eelke van der Horst, Mark Thompson, Rajaram Kaliyaperumal, Barend Mons, Erik M. van Mulligen, Jan A. Kors, Marco Roos

F1000Research, 2014

The Research Object Suite of Ontologies: Sharing and Exchanging Research Data and Methods on the Open Web.

Khalid Belhajjame, Jun Zhao, Daniel Garijo, Kristina M. Hettne, Raúl Palma, Óscar Corcho, José Manuél Gómez-Pérez, Sean Bechhofer, Graham Klyne, Carole A. Goble

CoRR, 2014

Structuring research methods and data with the research object model: genomics workflows as a case study.

Kristina M. Hettne, Harish Dharuri, Jun Zhao, Katherine Wolstencroft, Khalid Belhajjame, Stian Soiland-Reyes, Eleni Mina, Mark Thompson, Don Cruickshank, Lourdes Verdes-Montenegro, Julián Garrido, David De Roure, Óscar Corcho, Graham Klyne, Reinout van Schouwen, Peter A. C. 't Hoen, Sean Bechhofer, Carole A. Goble, Marco Roos

J. Biomed. Semant., 2014

2013

Nanopublications for Exposing Experimental Data in the Life-sciences: A Huntington's Disease Case Study.

Eleni Mina, Mark Thompson, Rajaram Kaliyaperumal, Jun Zhao, Kristina M. Hettne, Erik A. Schultes, Marco Roos

Proceedings of the 6th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2013

Workflows and Services for Concept Profile Generation.

Eelke van der Horst, Marco Roos, Kristina M. Hettne

Proceedings of the 6th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2013

2012

Best Practices for Workflow Design: How to Prevent Workflow Decay.

Kristina M. Hettne, Katherine Wolstencroft, Khalid Belhajjame, Carole A. Goble, Eleni Mina, Harish Dharuri, David De Roure, Lourdes Verdes-Montenegro, Julián Garrido, Marco Roos

Proceedings of the 5th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2012

RO-Manager: A Tool for Creating and Manipulating Research Objects to Support Reproducibility and Reuse in Sciences.

Jun Zhao, Graham Klyne, Piotr Holubowicz, Raúl Palma, Stian Soiland-Reyes, Kristina M. Hettne, José Enrique Ruiz, Marco Roos, Kevin R. Page, José Manuél Gómez-Pérez, David De Roure, Carole A. Goble

Proceedings of the Second International Workshop on Linked Science 2012, 2012

Why workflows break - Understanding and combating decay in Taverna workflows.

Jun Zhao, José Manuél Gómez-Pérez, Khalid Belhajjame, Graham Klyne, Esteban García-Cuesta, Aleix Garrido, Kristina M. Hettne, Marco Roos, David De Roure, Carole A. Goble

Proceedings of the 8th IEEE International Conference on E-Science, 2012

2011

Literature-aided interpretation of gene expression data with the weighted global test.

Rob Jelier, Jelle J. Goeman, Kristina M. Hettne, Martijn J. Schuemie, Johan T. den Dunnen, Peter A. C. 't Hoen

Briefings Bioinform., 2011

Workflow forever: semantic web semantic models and tools for preserving and digitally publishing computational experiments.

Kristina M. Hettne, Stian Soiland-Reyes, Graham Klyne, Khalid Belhajjame, Matthew Gamble, Sean Bechhofer, Marco Roos, Óscar Corcho

Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

Towards the Preservation of Scientific Workflows.

David De Roure, Carole A. Goble, Graham Klyne, Marco Roos, Kristina M. Hettne, José Enrique Ruiz, Raúl Palma, José Manuél Gómez-Pérez, Paolo Missier, Khalid Belhajjame

Proceedings of the 8th International Conference on Digital Preservation, 2011

2010

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining (Correction).

Kristina M. Hettne, Antony J. Williams, Erik M. van Mulligen, Jos Kleinjans, Valery Tkachenko, Jan A. Kors

J. Cheminformatics, 2010

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining.

Kristina M. Hettne, Antony J. Williams, Erik M. van Mulligen, Jos Kleinjans, Valery Tkachenko, Jan A. Kors

J. Cheminformatics, 2010

Rewriting and suppressing UMLS terms for improved biomedical term identification.

Kristina M. Hettne, Erik M. van Mulligen, Martijn J. Schuemie, Bob J. A. Schijvenaars, Jan A. Kors

J. Biomed. Semant., 2010

2009

A dictionary to identify small molecules and drugs in free text.

Kristina M. Hettne, Rob H. Stierum, Martijn J. Schuemie, Peter J. M. Hendriksen, Bob J. A. Schijvenaars, Erik M. van Mulligen, Jos Kleinjans, Jan A. Kors

Bioinform., 2009

2008

Model Formulation: Training Multidisciplinary Biomedical Informatics Students: Three Years of Experience.

Erik M. van Mulligen, Montserrat Cases, Kristina M. Hettne, Eva Molero, Marc Weeber, Kevin A. Robertson, Baldomero Oliva, Guillermo de la Calle, Victor Maojo

J. Am. Medical Informatics Assoc., 2008