Konstantinos Mavrommatis

According to our database, Konstantinos Mavrommatis authored at least 19 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

pCCI: A machine learning patient-centric cell-cell interactions framework for cancer subtype classification.

Pantelis Papageorgiou, Aigli Korfiati, Aristotelis Misios, Aristidis G. Vrahatis, Alexandros A. Pittis, Bogdan Tanasa, Konstantinos Mavrommatis, Yilin Zhao, Tao Yang, Vassilis Pitsikalis

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

Confronting and intrusion detection techniques of cyber-attacks in wired and wireless communication networks.

Konstantinos Mavrommatis

Proceedings of the 26th Pan-Hellenic Conference on Informatics, 2022

Optimization techniques for the energy efficiency of wireless networks.

Konstantinos Mavrommatis

Proceedings of the 26th Pan-Hellenic Conference on Informatics, 2022

2014

IMG 4 version of the integrated microbial genomes comparative analysis system.

Victor M. Markowitz, I-Min A. Chen, Krishna Palaniappan, Ken Chu, Ernest Szeto, Manoj Pillay, Anna Ratner, Jinghua Huang, Tanja Woyke, Marcel Huntemann, Iain Anderson, Konstantinos Billis, Neha Varghese, Konstantinos Mavrommatis, Amrita Pati, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2014

IMG/M 4 version of the integrated metagenome comparative analysis system.

Victor M. Markowitz, I-Min A. Chen, Ken Chu, Ernest Szeto, Krishna Palaniappan, Manoj Pillay, Anna Ratner, Jinghua Huang, Ioanna Pagani, Susannah Tringe, Marcel Huntemann, Konstantinos Billis, Neha Varghese, Kristin Tennessen, Konstantinos Mavrommatis, Amrita Pati, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2014

2013

Accelerating gene context analysis using bitmaps.

Alexandru Romosan, Arie Shoshani, Kesheng Wu, Victor M. Markowitz, Konstantinos Mavrommatis

Proceedings of the Conference on Scientific and Statistical Database Management, 2013

2012

IMG: the integrated microbial genomes database and comparative analysis system.

Victor M. Markowitz, I-Min A. Chen, Krishna Palaniappan, Ken Chu, Ernest Szeto, Yuri Grechkin, Anna Ratner, Biju Jacob, Jinghua Huang, Peter Williams, Marcel Huntemann, Iain Anderson, Konstantinos Mavrommatis, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2012

IMG/M: the integrated metagenome data management and comparative analysis system.

Victor M. Markowitz, I-Min A. Chen, Ken Chu, Ernest Szeto, Krishna Palaniappan, Yuri Grechkin, Anna Ratner, Biju Jacob, Amrita Pati, Marcel Huntemann, Konstantinos Liolios, Ioanna Pagani, Iain Anderson, Konstantinos Mavrommatis, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2012

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools.

Andreas Wilke, Travis Harrison, Jared Wilkening, Dawn Field, Elizabeth M. Glass, Nikos Kyrpides, Konstantinos Mavrommatis, Folker Meyer

BMC Bioinform., 2012

2010

The integrated microbial genomes system: an expanding comparative analysis resource.

Victor M. Markowitz, I-Min A. Chen, Krishna Palaniappan, Ken Chu, Ernest Szeto, Yuri Grechkin, Anna Ratner, Iain Anderson, Athanasios Lykidis, Konstantinos Mavrommatis, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2010

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata.

Konstantinos Liolios, I-Min A. Chen, Konstantinos Mavrommatis, Nektarios Tavernarakis, Philip Hugenholtz, Victor M. Markowitz, Nikos Kyrpides

Nucleic Acids Res., 2010

Estimating DNA coverage and abundance in metagenomes using a gamma approximation.

Sean D. Hooper, Daniel Dalevi, Amrita Pati, Konstantinos Mavrommatis, Natalia Ivanova, Nikos Kyrpides

Bioinform., 2010

2009

IMG ER: a system for microbial genome annotation expert review and curation.

Victor M. Markowitz, Konstantinos Mavrommatis, Natalia Ivanova, I-Min A. Chen, Ken Chu, Nikos Kyrpides

Bioinform., 2009

2008

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions.

Victor M. Markowitz, Ernest Szeto, Krishna Palaniappan, Yuri Grechkin, Ken Chu, I-Min A. Chen, Inna Dubchak, Iain Anderson, Athanasios Lykidis, Konstantinos Mavrommatis, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2008

IMG/M: a data management and analysis system for metagenomes.

Victor M. Markowitz, Natalia Ivanova, Ernest Szeto, Krishna Palaniappan, Ken Chu, Daniel Dalevi, I-Min A. Chen, Yuri Grechkin, Inna Dubchak, Iain Anderson, Athanasios Lykidis, Konstantinos Mavrommatis, Philip Hugenholtz, Nikos Kyrpides

Nucleic Acids Res., 2008

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata.

Konstantinos Liolios, Konstantinos Mavrommatis, Nektarios Tavernarakis, Nikos Kyrpides

Nucleic Acids Res., 2008

Annotation of metagenome short reads using proxygenes.

Daniel Dalevi, Natalia Ivanova, Konstantinos Mavrommatis, Sean D. Hooper, Ernest Szeto, Philip Hugenholtz, Nikos Kyrpides, Victor M. Markowitz

Proceedings of the ECCB'08 Proceedings, 2008

2006

The integrated microbial genomes (IMG) system.

Victor M. Markowitz, Frank Korzeniewski, Krishna Palaniappan, Ernest Szeto, Greg Werner, Anu Padki, Xueling Zhao, Inna Dubchak, Philip Hugenholtz, Iain Anderson, Athanasios Lykidis, Konstantinos Mavrommatis, Natalia Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2006

An experimental metagenome data management and analysis system.

Victor M. Markowitz, Natalia Ivanova, Krishna Palaniappan, Ernest Szeto, Frank Korzeniewski, Athanasios Lykidis, Iain Anderson, Konstantinos Mavrommatis, Victor Kunin, Héctor García Martín, Inna Dubchak, Philip Hugenholtz, Nikos Kyrpides

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006