Konrad Krawczyk

According to our database, Konrad Krawczyk authored at least 16 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

LAP: Liability Antibody Profiler by sequence & structural mapping of natural and therapeutic antibodies.

Tadeusz Satlawa, Mateusz Tarkowski, Sonia Wróbel, Pawel Dudzic, Tomasz Gawlowski, Tomasz Klaus, Marek Orlowski, Anna Kostyn, Sandeep Kumar, Andrew Buchanan, Konrad Krawczyk

PLoS Comput. Biol., 2024

Empirical Study of Surrogate Model Assisting JADE: Relation Between the Model Accuracy and the Optimization Efficiency.

Konrad Krawczyk, Jaroslaw Arabas

Proceedings of the Genetic and Evolutionary Computation Conference Companion, 2024

2023

Comparison of Different Surrogate Models for the JADE Algorithm.

Konrad Krawczyk, Jaroslaw Arabas

Proceedings of the 15th International Joint Conference on Computational Intelligence, 2023

JADE with k Nearest Neighbors Surrogate Model.

Konrad Krawczyk, Jaroslaw Arabas

Proceedings of the Companion Proceedings of the Conference on Genetic and Evolutionary Computation, 2023

2022

INDI - integrated nanobody database for immunoinformatics.

Piotr Deszynski, Jakub Mlokosiewicz, Adam Volanakis, Igor Jaszczyszyn, Natalie Castellana, Stefano Bonissone, Rajkumar Ganesan, Konrad Krawczyk

Nucleic Acids Res., 2022

MS2AI: automated repurposing of public peptide LC-MS data for machine learning applications.

Tobias Greisager Rehfeldt, Konrad Krawczyk, Mathias Bøgebjerg, Veit Schwämmle, Richard Röttger

Bioinform., 2022

Machine-designed biotherapeutics: opportunities, feasibility and advantages of deep learning in computational antibody discovery.

Wiktoria Wilman, Sonia Wróbel, Weronika Bielska, Piotr Deszynski, Pawel Dudzic, Igor Jaszczyszyn, Jedrzej Kaniewski, Jakub Mlokosiewicz, Anahita Rouyan, Tadeusz Satlawa, Sandeep Kumar, Victor Greiff, Konrad Krawczyk

Briefings Bioinform., 2022

2020

The evolution of contact prediction: evidence that contact selection in statistical contact prediction is changing.

Mark Chonofsky, Saulo Henrique Pires de Oliveira, Konrad Krawczyk, Charlotte M. Deane

Bioinform., 2020

Computational approaches to therapeutic antibody design: established methods and emerging trends.

Richard A. Norman, Francesco Ambrosetti, Alexandre M. J. J. Bonvin, Lucy J. Colwell, Sebastian Kelm, Sandeep Kumar, Konrad Krawczyk

Briefings Bioinform., 2020

2018

STCRDab: the structural T-cell receptor database.

Jinwoo Leem, Saulo Henrique Pires de Oliveira, Konrad Krawczyk, Charlotte M. Deane

Nucleic Acids Res., 2018

In silico structural modeling of multiple epigenetic marks on DNA.

Konrad Krawczyk, Samuel Demharter, Bernhard Knapp, Charlotte M. Deane, Peter Minary

Bioinform., 2018

2016

SAbPred: a structure-based antibody prediction server.

James Dunbar, Konrad Krawczyk, Jinwoo Leem, Claire Marks, Jaroslaw Nowak, Cristian Regep, Guy Georges, Sebastian Kelm, Bojana Popovic, Charlotte M. Deane

Nucleic Acids Res., 2016

Tertiary Element Interaction in HIV-1 TAR.

Konrad Krawczyk, Adelene Y. L. Sim, Bernhard Knapp, Charlotte M. Deane, Peter Minary

J. Chem. Inf. Model., 2016

Progress and challenges in predicting protein interfaces.

Reyhaneh Esmaielbeiki, Konrad Krawczyk, Bernhard Knapp, Jean-Christophe Nebel, Charlotte M. Deane

Briefings Bioinform., 2016

2014

SAbDab: the structural antibody database.

James Dunbar, Konrad Krawczyk, Jinwoo Leem, Terry Baker, Angelika Fuchs, Guy Georges, Jiye Shi, Charlotte M. Deane

Nucleic Acids Res., 2014

Improving B-cell epitope prediction and its application to global antibody-antigen docking.

Konrad Krawczyk, Xiaofeng Liu, Terry Baker, Jiye Shi, Charlotte M. Deane

Bioinform., 2014