Koji Tsuda
Orcid: 0000-0002-4288-1606
According to our database1,
Koji Tsuda
authored at least 127 papers
between 1995 and 2024.
Collaborative distances:
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Bibliography
2024
2023
Patterns, December, 2023
Efficient model selection for predictive pattern mining model by safe pattern pruning.
Patterns, December, 2023
Interpretable Fragment-Based Molecule Design with Self-Learning Entropic Population Annealing.
Adv. Intell. Syst., October, 2023
Pattern Recognit., June, 2023
NIMS-OS: An automation software to implement a closed loop between artificial intelligence and robotic experiments in materials science.
CoRR, 2023
2022
QCforever: A Quantum Chemistry Wrapper for Everyone to Use in Black-Box Optimization.
J. Chem. Inf. Model., 2022
Proceedings of the Thirty-Sixth AAAI Conference on Artificial Intelligence, 2022
2021
J. Cheminformatics, 2021
CoRR, 2021
CoRR, 2021
2020
VLDB J., 2020
CompRet: a comprehensive recommendation framework for chemical synthesis planning with algorithmic enumeration.
J. Cheminformatics, 2020
2019
CoRR, 2019
2018
Improving the Accuracy of Protein-Ligand Binding Mode Prediction Using a Molecular Dynamics-Based Pocket Generation Approach.
J. Comput. Chem., 2018
MP-LAMP: parallel detection of statistically significant multi-loci markers on cloud platforms.
Bioinform., 2018
Machine learning accelerates MD-based binding pose prediction between ligands and proteins.
Bioinform., 2018
Proceedings of the Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, 2018
2017
Proceedings of the 34th International Conference on Machine Learning, 2017
Proceedings of the 34th International Conference on Machine Learning, 2017
2016
CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data.
BMC Bioinform., 2016
Bioinform., 2016
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2016
Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016
Proceedings of the IEEE International Symposium on Information Theory, 2016
2015
BMC Bioinform., December, 2015
Proceedings of the WALCOM: Algorithms and Computation - 9th International Workshop, 2015
Proceedings of the 2015 IEEE Symposium on Security and Privacy Workshops, 2015
Proceedings of the 30th Annual ACM Symposium on Applied Computing, 2015
Predictive Approaches for Low-Cost Preventive Medicine Program in Developing Countries.
Proceedings of the 21th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2015
2014
IEEE Trans. Smart Grid, 2014
Oblivious Evaluation of Non-deterministic Finite Automata with Application to Privacy-Preserving Virus Genome Detection.
Proceedings of the 13th Workshop on Privacy in the Electronic Society, 2014
Proceedings of the 1st ECML/PKDD Workshop on Statistically Sound Data Mining, 2014
A Fast Method of Statistical Assessment for Combinatorial Hypotheses Based on Frequent Itemset Enumeration.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2014
Proceedings of the Sixth Asian Conference on Machine Learning, 2014
2013
IEICE Trans. Inf. Syst., 2013
Compact Complete Inverted Files for Texts and Directed Acyclic Graphs Based on Sequence Binary Decision Diagrams .
Proceedings of the Prague Stringology Conference 2013, Prague, Czech Republic, 2013
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013
2012
Nucleic Acids Res., 2012
2011
Proceedings of the Eleventh SIAM International Conference on Data Mining, 2011
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2011
Second Workshop on Algorithms for Large-Scale Information Processing in Knowledge Discovery (ALSIP).
Proceedings of the New Frontiers in Artificial Intelligence, 2011
Proceedings of the Graph Data Management: Techniques and Applications., 2011
Proceedings of the Handbook of Statistical Bioinformatics., 2011
2010
Proceedings of the 2nd Asian Conference on Machine Learning, 2010
IEICE Trans. Inf. Syst., 2010
Reaction graph kernels predict EC numbers of unknown enzymatic reactions in plant secondary metabolism.
BMC Bioinform., 2010
2009
Mach. Learn., 2009
CoRR, 2009
Efficiently finding genome-wide three-way gene interactions from transcript- and genotype-data.
Bioinform., 2009
Simultaneous inference of biological networks of multiple species from genome-wide data and evolutionary information: a semi-supervised approach.
Bioinform., 2009
Bioinform., 2009
Bioinform., 2009
Proceedings of the SIAM International Conference on Data Mining, 2009
Proceedings of the SIAM International Conference on Data Mining, 2009
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2009
Proceedings of the Advances in Neural Information Processing Systems 22: 23rd Annual Conference on Neural Information Processing Systems 2009. Proceedings of a meeting held 7-10 December 2009, 2009
Proceedings of the 2nd ACM SIGKDD Workshop on Data Mining using Matrices and Tensors, 2009
2008
Proceedings of the SIAM International Conference on Data Mining, 2008
Proceedings of the 14th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2008
Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008), 2008
Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008), 2008
2007
Proceedings of the Eleventh International Conference on Artificial Intelligence and Statistics, 2007
Experimental design for efficient identification of gene regulatory networks using sparse Bayesian models.
BMC Syst. Biol., 2007
BMC Bioinform., 2007
BMC Bioinform., 2007
Bioinform., 2007
Proceedings of the Seventh SIAM International Conference on Data Mining, 2007
Proceedings of the Machine Learning, 2007
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007
Proceedings of the 2007 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2007), 2007
2006
BMC Bioinform., 2006
SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments.
Bioinform., 2006
Proceedings of the Machine Learning, 2006
Proceedings of the Semi-Supervised Learning, 2006
2005
J. Mach. Learn. Res., 2005
Bioinform., 2005
Proceedings of the Machine Learning, 2005
Proceedings of the ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28, 2005
2004
Minimizing the Cross Validation Error to Mix Kernel Matrices of Heterogeneous Biological Data.
Neural Process. Lett., 2004
Proceedings of the Structural, 2004
Proceedings of the Advances in Neural Information Processing Systems 17 [Neural Information Processing Systems, 2004
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
Proceedings of the Pattern Recognition, 26th DAGM Symposium, August 30, 2004
2003
J. Mach. Learn. Res., 2003
Proceedings of the Machine Learning, 2003
2002
Subspace information criterion for nonquadratic regularizers-Model selection for sparse regressors.
IEEE Trans. Neural Networks, 2002
Proceedings of the Advances in Neural Information Processing Systems 15 [Neural Information Processing Systems, 2002
Marginalized kernels for biological sequences.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002
Modeling splicing sites with pairwise correlations.
Proceedings of the European Conference on Computational Biology (ECCB 2002), 2002
2001
IEEE Trans. Vis. Comput. Graph., 2001
IEEE Trans. Neural Networks, 2001
Proceedings of the Artificial Neural Networks, 2001
Proceedings of the 2001 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2001), 2001
2000
Proceedings of the IEEE-INNS-ENNS International Joint Conference on Neural Networks, 2000
1999
Proceedings of the International Joint Conference Neural Networks, 1999
Proceedings of the 7th European Symposium on Artificial Neural Networks, 1999
1998
Pattern Recognition Method for Metric Space by Four Points Embedding.
Proceedings of the Image and Vision Computing New Zealand, International Conference, 1998
1997
Syst. Comput. Jpn., 1997
Proceedings of the 4th International Conference Document Analysis and Recognition (ICDAR '97), 1997
1996
Pattern Recognit. Lett., 1996
1995
Proceedings of the Third International Conference on Document Analysis and Recognition, 1995