Kayhan Batmanghelich

Orcid: 0000-0001-9893-9136

Affiliations:
  • University of Pittsburgh, Department of Biomedical Informatics, PA, USA
  • Massachusetts Institute of Technology (MIT), Computer Science and Artificial Intelligence Lab (former)
  • University of Pennsylvania, Section of Biomedical Image Analysis (former)


According to our database1, Kayhan Batmanghelich authored at least 87 papers between 2005 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Online presence:

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Bibliography

2024
MedSyn: Text-Guided Anatomy-Aware Synthesis of High-Fidelity 3-D CT Images.
IEEE Trans. Medical Imaging, October, 2024

DrasCLR: A self-supervised framework of learning disease-related and anatomy-specific representation for 3D lung CT images.
Medical Image Anal., February, 2024

LADDER: Language Driven Slice Discovery and Error Rectification.
CoRR, 2024

Mammo-CLIP: A Vision Language Foundation Model to Enhance Data Efficiency and Robustness in Mammography.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

2023
Beyond Distribution Shift: Spurious Features Through the Lens of Training Dynamics.
Trans. Mach. Learn. Res., 2023

Explaining the black-box smoothly - A counterfactual approach.
Medical Image Anal., 2023

CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation.
Medical Image Anal., 2023

MedSyn: Text-guided Anatomy-aware Synthesis of High-Fidelity 3D CT Images.
CoRR, 2023

Two-Step Active Learning for Instance Segmentation with Uncertainty and Diversity Sampling.
CoRR, 2023

Exploring the Lottery Ticket Hypothesis with Explainability Methods: Insights into Sparse Network Performance.
CoRR, 2023

DrasCLR: A Self-supervised Framework of Learning Disease-related and Anatomy-specific Representation for 3D Medical Images.
CoRR, 2023

Route, Interpret, Repeat: Blurring the Line Between Post hoc Explainability and Interpretable Models.
CoRR, 2023

Shortcut Learning Through the Lens of Early Training Dynamics.
CoRR, 2023

Augmentation by Counterfactual Explanation -Fixing an Overconfident Classifier.
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2023

Semi-Implicit Denoising Diffusion Models (SIDDMs).
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Physics-Informed Neural Networks for Tissue Elasticity Reconstruction in Magnetic Resonance Elastography.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Distilling BlackBox to Interpretable Models for Efficient Transfer Learning.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Time-Series Aware Metrics for the Evaluation of Intraoperative Electroencephalography-Based Ischemia Detection.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

Dividing and Conquering a BlackBox to a Mixture of Interpretable Models: Route, Interpret, Repeat.
Proceedings of the International Conference on Machine Learning, 2023

From Characters to Words: Hierarchical Pre-trained Language Model for Open-vocabulary Language Understanding.
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2023

2022
Hierarchical Amortized GAN for 3D High Resolution Medical Image Synthesis.
IEEE J. Biomed. Health Informatics, 2022

Hyperbolic Molecular Representation Learning for Drug Repositioning.
CoRR, 2022

Context-aware Self-supervised Learning for Medical Images Using Graph Neural Network.
CoRR, 2022

CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwnannoma and Cochlea Segmentation.
CoRR, 2022

Anatomy-Guided Weakly-Supervised Abnormality Localization in Chest X-rays.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Adversarial Consistency for Single Domain Generalization in Medical Image Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Maximum Spatial Perturbation Consistency for Unpaired Image-to-Image Translation.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022

Knowledge Distillation via Constrained Variational Inference.
Proceedings of the Thirty-Sixth AAAI Conference on Artificial Intelligence, 2022

2021
Box-Adapt: Domain-Adaptive Medical Image Segmentation using Bounding BoxSupervision.
CoRR, 2021

Explaining the Black-box Smoothly- A Counterfactual Approach.
CoRR, 2021

Unpaired data empowers association tests.
Bioinform., 2021

Can contrastive learning avoid shortcut solutions?
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021

Incorporating External Information in Tissue Subtyping: A Topic Modeling Approach.
Proceedings of the Machine Learning for Healthcare Conference, 2021

Using Causal Analysis for Conceptual Deep Learning Explanation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Self-supervised Vessel Enhancement Using Flow-Based Consistencies.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Extracting Disease-Relevant Features with Adversarial Regularization.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Context Matters: Graph-based Self-supervised Representation Learning for Medical Images.
Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021

2020
Semi-supervised Hierarchical Drug Embedding in Hyperbolic Space.
J. Chem. Inf. Model., 2020

Hierarchical Amortized Training for Memory-efficient High Resolution 3D GAN.
CoRR, 2020

Label-Noise Robust Domain Adaptation.
Proceedings of the 37th International Conference on Machine Learning, 2020

Explanation by Progressive Exaggeration.
Proceedings of the 8th International Conference on Learning Representations, 2020

Human-Machine Collaboration for Medical Image Segmentation.
Proceedings of the 2020 IEEE International Conference on Acoustics, 2020

Generative-Discriminative Complementary Learning.
Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020

Weakly Supervised Disentanglement by Pairwise Similarities.
Proceedings of the Thirty-Fourth AAAI Conference on Artificial Intelligence, 2020

2019
Robust Ordinal VAE: Employing Noisy Pairwise Comparisons for Disentanglement.
CoRR, 2019

Learning Depth from Monocular Videos Using Synthetic Data: A Temporally-Consistent Domain Adaptation Approach.
CoRR, 2019

Twin Auxiliary Classifiers GAN.
CoRR, 2019

Robust Angular Local Descriptor Learning.
CoRR, 2019

Twin Auxilary Classifiers GAN.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019

Geometry-Consistent Generative Adversarial Networks for One-Sided Unsupervised Domain Mapping.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2019

2018
Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge.
CoRR, 2018

Deep Diffeomorphic Normalizing Flows.
CoRR, 2018

Geometry-Consistent Adversarial Networks for One-Sided Unsupervised Domain Mapping.
CoRR, 2018

Causal Generative Domain Adaptation Networks.
CoRR, 2018

A structural equation model for imaging genetics using spatial transcriptomics.
Brain Informatics, 2018

Causal Discovery with Linear Non-Gaussian Models under Measurement Error: Structural Identifiability Results.
Proceedings of the Thirty-Fourth Conference on Uncertainty in Artificial Intelligence, 2018

Multi-scale Masked 3-D U-Net for Brain Tumor Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2018

Subject2Vec: Generative-Discriminative Approach from a Set of Image Patches to a Vector.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

An Efficient and Provable Approach for Mixture Proportion Estimation Using Linear Independence Assumption.
Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, 2018

Deep Ordinal Regression Network for Monocular Depth Estimation.
Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, 2018

Robust Angular Local Descriptor Learning.
Proceedings of the Computer Vision - ACCV 2018, 2018

2017
Transformations Based on Continuous Piecewise-Affine Velocity Fields.
IEEE Trans. Pattern Anal. Mach. Intell., 2017

Causal Discovery in the Presence of Measurement Error: Identifiability Conditions.
CoRR, 2017

A Likelihood-Free Approach for Characterizing Heterogeneous Diseases in Large-Scale Studies.
Proceedings of the Information Processing in Medical Imaging, 2017

BatmanLab in the ImageCLEF Tuberculosis task 2017.
Proceedings of the Working Notes of CLEF 2017, 2017

Textured Graph-Based Model of the Lungs: Application on Tuberculosis Type Classification and Multi-drug Resistance Detection.
Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2017

Textured Graph-model of the Lungs for Tuberculosis Type Classification and Drug Resistance Prediction: Participation in ImageCLEF 2017.
Proceedings of the Working Notes of CLEF 2017, 2017

2016
Unsupervised Discovery of Emphysema Subtypes in a Large Clinical Cohort.
Proceedings of the Machine Learning in Medical Imaging - 7th International Workshop, 2016

Inferring Disease Status by Non-parametric Probabilistic Embedding.
Proceedings of the Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging, 2016

Nonparametric Spherical Topic Modeling with Word Embeddings.
Proceedings of the 54th Annual Meeting of the Association for Computational Linguistics, 2016

2015
Generative Method to Discover Genetically Driven Image Biomarkers.
Proceedings of the Information Processing in Medical Imaging, 2015

Highly-Expressive Spaces of Well-Behaved Transformations: Keeping it Simple.
Proceedings of the 2015 IEEE International Conference on Computer Vision, 2015

2014
Diversifying Sparsity Using Variational Determinantal Point Processes.
CoRR, 2014

Spherical Topic Models for Imaging Phenotype Discovery in Genetic Studies.
Proceedings of the Bayesian and grAphical Models for Biomedical Imaging, 2014

2013
Joint Modeling of Imaging and Genetics.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
Generative-Discriminative Basis Learning for Medical Imaging.
IEEE Trans. Medical Imaging, 2012

An Integrated Framework for High Angular Resolution Diffusion Imaging-Based Investigation of Structural Connectivity.
Brain Connect., 2012

Dominant Component Analysis of Electrophysiological Connectivity Networks.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

2011
Regularized Tensor Factorization for Multi-Modality Medical Image Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Disease classification and prediction via semi-supervised dimensionality reduction.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

2010
Application of trace-norm and low-rank matrix decomposition for computational anatomy.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2010

2009
A General and Unifying Framework for Feature Construction, in Image-Based Pattern Classification.
Proceedings of the Information Processing in Medical Imaging, 2009

2008
Spatial patterns of brain atrophy in MCI patients, identified via high-dimensional pattern classification, predict subsequent cognitive decline.
NeuroImage, 2008

Multiparametric tissue abnormality characterization using manifold regularization.
Proceedings of the Medical Imaging 2008: Computer-Aided Diagnosis, 2008

On non-linear characterization of tissue abnormality by constructing disease manifolds.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2006
Distributed Behavior-based Multi-agent System for Automatic Segmentation of Brain MR Images.
Proceedings of the International Joint Conference on Neural Networks, 2006

2005
Knowledge-based segmentation: Using simultaneous shape and histogram information to segment brain structures.
Proceedings of the Signal and Image Processing (SIP 2005), 2005


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