Katy Wolstencroft

According to our database, Katy Wolstencroft authored at least 57 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Introduction to the Special Issue on Digital Natural and Cultural Heritage: Opportunities and Challenges.

Andreas Weber, Maarten Heerlien, Eulàlia Gassó Miracle, Katherine Wolstencroft

ACM Journal on Computing and Cultural Heritage, March, 2023

Structured review on Huntington's disease iron hypothesis.

Karolis Cremers, Marco Roos, Katy Wolstencroft, Eleni Mina, Núria Queralt-Rosinach

Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

FAIR Functional Enrichment: Assessing and Modelling Provenance in Omics Results.

Yi Chen, Fons J. Verbeek, Katherine Wolstencroft

Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

2022

Possibility of Enhancing Digital Health Interoperability in Uganda through FAIR Data.

Mariam Basajja, Mutwalibi Nambobi, Katy Wolstencroft

Data Intell., 2022

2021

Perspectives on automated composition of workflows in the life sciences.

Anna-Lena Lamprecht, Magnus Palmblad, Jon C. Ison, Veit Schwämmle, Mohammad Sadnan Al Manir, Ilkay Altintas, Christopher J. O. Baker, Ammar Ben Hadj Amor, Salvador Capella-Gutiérrez, Paulos Charonyktakis, Michael R. Crusoe, Yolanda Gil, Carole A. Goble, Timothy J. Griffin, Paul Groth, Hans Ienasescu, Pratik D. Jagtap, Matús Kalas, Vedran Kasalica, Alireza Khanteymoori, Tobias Kuhn, Hailiang Mei, Hervé Ménager, Steffen Möller, Robin A. Richardson, Vincent Robert, Stian Soiland-Reyes, Robert Stevens, Szaniszlo Szoke, Suzan Verberne, Aswin Verhoeven, Katherine Wolstencroft

F1000Research, 2021

Large-scale zero-shot learning in the wild: Classifying zoological illustrations.

Lise Stork, Andreas Weber, H. Jaap van den Herik, Aske Plaat, Fons J. Verbeek, Katherine Wolstencroft

Ecol. Informatics, 2021

Establishing a consensus for the hallmarks of cancer based on gene ontology and pathway annotations.

Yi Chen, Fons J. Verbeek, Katherine Wolstencroft

BMC Bioinform., 2021

2019

Semantic annotation of natural history collections.

Lise Stork, Andreas Weber, Eulalia Gasso Miracle, Fons J. Verbeek, Aske Plaat, H. Jaap van den Herik, Katherine Wolstencroft

J. Web Semant., 2019

Automated Semantic Annotation of Species Names in Handwritten Texts.

Lise Stork, Andreas Weber, H. Jaap van den Herik, Aske Plaat, Fons J. Verbeek, Katherine Wolstencroft

Proceedings of the Advances in Information Retrieval, 2019

2018

From Handwritten Manuscripts to Linked Data.

Lise Stork, Andreas Weber, H. Jaap van den Herik, Aske Plaat, Fons J. Verbeek, Katherine Wolstencroft

Proceedings of the Digital Libraries for Open Knowledge, 2018

Linking Natural History Collections.

Lise Stork, Andreas Weber, Eulalia Gasso Miracle, Katherine Wolstencroft

Proceedings of the 14th IEEE International Conference on e-Science, 2018

2017

FAIRDOMHub: a repository and collaboration environment for sharing systems biology research.

Katherine Wolstencroft, Olga Krebs, Jacky L. Snoep, Natalie J. Stanford, Finn Bacall, Martin Golebiewski, Rostyk Kuzyakiv, Quyen Nguyen, Stuart Owen, Stian Soiland-Reyes, Jakub Straszewski, David D. van Niekerk, Alan R. Williams, Lars Malmström, Bernd Rinn, Wolfgang Müller, Carole A. Goble

Nucleic Acids Res., 2017

Towards a Digital Infrastructure for Illustrated Handwritten Archives.

Andreas Weber, Mahya Ameryan, Katherine Wolstencroft, Lise Stork, Maarten Heerlien, Lambert Schomaker

Proceedings of the Digital Cultural Heritage, 2017

2016

FAIRDOM approach for semantic interoperability of systems biology data and models.

Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Rostyk Kuzyakiv, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

Making Sense of Illustrated Handwritten Archives.

Lambert Schomaker, Andreas Weber, Michiel Thijssen, Maarten Heerlien, Aske Plaat, Siegfried Nijssen, Fons J. Verbeek, Michael S. Lew, Eulalia Gasso Miracle, Katy Wolstencroft, Ernest Suyver, Bart Verheij, Marco A. Wiering, René Dekker, Joost N. Kok, Lissa Roberts, H. Jaap van den Herik

Proceedings of the 11th Annual International Conference of the Alliance of Digital Humanities Organizations, 2016

2015

SEEK: a systems biology data and model management platform.

Katherine Wolstencroft, Stuart Owen, Olga Krebs, Quyen Nguyen, Natalie J. Stanford, Martin Golebiewski, Andreas Weidemann, Meik Bittkowski, Lihua An, David Shockley, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

BMC Syst. Biol., 2015

FAIRDOM approach for semantic interoperability of systems biology data and models.

Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

Proceedings of the International Conference on Biomedical Ontology, 2015

Multidisciplinary Collaboration to Facilitate Hypotheses Generation in Huntington's Disease.

Eleni Mina, Mark Thompson, Kristina M. Hettne, Willeke M. C. van Roon-Mom, Rajaram Kaliyaperumal, Eelke van der Horst, Katherine Wolstencroft, Barend Mons, Marco Roos

Proceedings of the 11th IEEE International Conference on e-Science, 2015

2014

Structuring research methods and data with the research object model: genomics workflows as a case study.

Kristina M. Hettne, Harish Dharuri, Jun Zhao, Katherine Wolstencroft, Khalid Belhajjame, Stian Soiland-Reyes, Eleni Mina, Mark Thompson, Don Cruickshank, Lourdes Verdes-Montenegro, Julián Garrido, David De Roure, Óscar Corcho, Graham Klyne, Reinout van Schouwen, Peter A. C. 't Hoen, Sean Bechhofer, Carole A. Goble, Marco Roos

J. Biomed. Semant., 2014

Track Introduction: Scientific Workflows.

Joost N. Kok, Anna-Lena Lamprecht, Kenneth J. Turner, Katy Wolstencroft

Proceedings of the Leveraging Applications of Formal Methods, Verification and Validation. Specialized Techniques and Applications, 2014

2013

The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud.

Katherine Wolstencroft, Robert Haines, Donal Fellows, Alan R. Williams, David Withers, Stuart Owen, Stian Soiland-Reyes, Ian Dunlop, Aleksandra Nenadic, Paul Fisher, Jiten Bhagat, Khalid Belhajjame, Finn Bacall, Alex R. Hardisty, Abraham Nieva de la Hidalga, Maria P. Balcazar Vargas, Shoaib Sufi, Carole A. Goble

Nucleic Acids Res., 2013

Stealthy annotation of experimental biology by spreadsheets.

Katherine Wolstencroft, Stuart Owen, Matthew Horridge, Simon Jupp, Olga Krebs, Jacky L. Snoep, Franco B. du Preez, Wolfgang Müller, Robert Stevens, Carole A. Goble

Concurr. Comput. Pract. Exp., 2013

Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform.

Katherine Wolstencroft, Stuart Owen, Olga Krebs, Wolfgang Müller, Quyen Nguyen, Jacky L. Snoep, Carole A. Goble

Proceedings of the Semantic Web - ISWC 2013, 2013

2012

Populous: a tool for building OWL ontologies from templates.

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Katy Wolstencroft, Robert Stevens

BMC Bioinform., 2012

Best Practices for Workflow Design: How to Prevent Workflow Decay.

Kristina M. Hettne, Katherine Wolstencroft, Khalid Belhajjame, Carole A. Goble, Eleni Mina, Harish Dharuri, David De Roure, Lourdes Verdes-Montenegro, Julián Garrido, Marco Roos

Proceedings of the 5th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2012

Opening new gateways to workflows for life scientists.

Konstantinos Karasavvas, Katy Wolstencroft, Eleni Mina, Don Cruickshank, Alan R. Williams, David De Roure, Carole A. Goble, Marco Roos

Proceedings of the HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, 2012

RightField: Scientific Knowledge Acquisition by Stealth through Ontology-Enabled Spreadsheets.

Katy Wolstencroft, Stuart Owen, Matthew Horridge, Wolfgang Müller, Finn Bacall, Jacky L. Snoep, Franco B. du Preez, Quyen Nguyen, Olga Krebs, Carole A. Goble

Proceedings of the Knowledge Engineering and Knowledge Management, 2012

RightField: Semantic enrichment of Systems Biology data using spreadsheets.

Katherine Wolstencroft, Stuart Owen, Carole A. Goble, Quyen Nguyen, Olga Krebs, Wolfgang Müller

Proceedings of the 8th IEEE International Conference on E-Science, 2012

2011

RightField: embedding ontology annotation in spreadsheets.

Katy Wolstencroft, Stuart Owen, Matthew Horridge, Olga Krebs, Wolfgang Müller, Jacky L. Snoep, Franco B. du Preez, Carole A. Goble

Bioinform., 2011

An experimental workflow development platform for historical document digitisation and analysis.

Clemens Neudecker, Sven Schlarb, Zeki Mustafa Dogan, Paolo Missier, Shoaib Sufi, Alan R. Williams, Katy Wolstencroft

Proceedings of the 2011 Workshop on Historical Document Imaging and Processing, 2011

Populous: A Tool for Populating an Ontology.

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Katy Wolstencroft, Robert Stevens

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

BioCatalogue: a universal catalogue of web services for the life sciences.

Jiten Bhagat, Franck Tanoh, Eric Nzuobontane, Thomas Laurent, Jerzy Orlowski, Marco Roos, Katy Wolstencroft, Sergejs Aleksejevs, Robert Stevens, Steve Pettifer, Rodrigo Lopez, Carole A. Goble

Nucleic Acids Res., 2010

Populous: A tool for populating ontology templates

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft

CoRR, 2010

Community-driven computational biology with Debian Linux.

Steffen Möller, Hajo N. Krabbenhöft, Andreas Tille, David Paleino, Alan R. Williams, Katy Wolstencroft, Carole A. Goble, Richard C. G. Holland, Dominique Belhachemi, Charles Plessy

BMC Bioinform., 2010

Populous: A Tool for Populating Templates for OWL Ontologies.

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010

Functional Units: Abstractions for Web Service Annotations.

Paolo Missier, Katy Wolstencroft, Franck Tanoh, Peter Li, Sean Bechhofer, Khalid Belhajjame, Steve Pettifer, Carole A. Goble

Proceedings of the 6th World Congress on Services, 2010

Rightfield: Embedding Ontology Term Selection into Spreadsheets for the Annotation of Biological Data.

Katy Wolstencroft, Matthew Horridge, Stuart Owen, Wolfgang Müller, Finn Bacall, Jacky L. Snoep, Olga Krebs, Carole A. Goble

Proceedings of the ISWC 2010 Posters & Demonstrations Track: Collected Abstracts, 2010

The Evolution of myExperiment.

David De Roure, Carole A. Goble, Sergejs Aleksejevs, Sean Bechhofer, Jiten Bhagat, Don Cruickshank, Paul Fisher, Nandkumar Kollara, Danius T. Michaelides, Paolo Missier, David R. Newman, Marcus Ramsden, Marco Roos, Katy Wolstencroft, Ed Zaluska, Jun Zhao

Proceedings of the Sixth International Conference on e-Science, 2010

2009

The data playground: An intuitive workflow specification environment.

Andrew Gibson, Matthew Gamble, Katy Wolstencroft, Tom Oinn, Carole A. Goble, Khalid Belhajjame, Paolo Missier

Future Gener. Comput. Syst., 2009

Benchmarking workflow discovery: a case study from bioinformatics.

Antoon Goderis, Paul Fisher, Andrew Gibson, Franck Tanoh, Katy Wolstencroft, David De Roure, Carole A. Goble

Concurr. Comput. Pract. Exp., 2009

Analysing Scientific Workflows: Why Workflows Not Only Connect Web Services.

Ingo H. C. Wassink, Paul E. van der Vet, Katy Wolstencroft, Pieter B. T. Neerincx, Marco Roos, Han Rauwerda, Timo M. Breit

Proceedings of the 2009 IEEE Congress on Services, Part I, 2009

2008

Solutions for data integration in functional genomics: a critical assessment and case study.

Damian Smedley, Morris A. Swertz, Katy Wolstencroft, Glenn Proctor, Michael Zouberakis, Jonathan B. L. Bard, John M. Hancock, Paul N. Schofield

Briefings Bioinform., 2008

Data curation + process curation=data integration + science.

Carole A. Goble, Robert Stevens, Duncan Hull, Katy Wolstencroft, Rodrigo Lopez

Briefings Bioinform., 2008

Metadata Management in the Taverna Workflow System.

Khalid Belhajjame, Katy Wolstencroft, Óscar Corcho, Tom Oinn, Franck Tanoh, Alan R. Williams, Carole A. Goble

Proceedings of the 8th IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2008), 2008

Towards dynamic database infrastructures for mouse genetics.

Morris A. Swertz, Damian Smedley, Katy Wolstencroft, Rudi Alberts, Michael Zouberakis, Vassilis Aidinis, Klaus Schughart, Paul N. Schofield, Ritsert C. Jansen

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007

Using OWL to model biological knowledge.

Robert Stevens, Mikel Egaña Aranguren, Katy Wolstencroft, Ulrike Sattler, Nick Drummond, Matthew Horridge, Alan L. Rector

Int. J. Hum. Comput. Stud., 2007

The _myGrid ontology: bioinformatics service discovery.

Katy Wolstencroft, Pinar Alper, Duncan Hull, Chris Wroe, Phillip W. Lord, Robert D. Stevens, Carole A. Goble

Int. J. Bioinform. Res. Appl., 2007

A systematic strategy for the discovery of candidate genes responsible for phenotypic variation.

Paul Fisher, Cornelia Hedeler, Katherine Wolstencroft, Helen Hulme, Harry Noyes, Stephen Kemp, Robert D. Stevens, Andy Brass

BMC Bioinform., 2007

Promotion of Ontological Comprehension: Exposing Terms and Metadata with Web 2.0.

Andrew Gibson, Katy Wolstencroft, Robert Stevens

Proceedings of the Workshop on Social and Collaborative Construction of Structured Knowledge (CKC 2007) at the 16th International World Wide Web Conference (WWW2007) Banff, 2007

The Data Playground: An Intuitive Workflow Specification Environment.

Andrew Gibson, Matthew Gamble, Katy Wolstencroft, Tom Oinn, Carole A. Goble

Proceedings of the Third International Conference on e-Science and Grid Computing, 2007

^myGrid and UTOPIA: An Integrated Approach to Enacting and Visualising in Silico Experiments in the Life Sciences.

Steve Pettifer, Katy Wolstencroft, Pinar Alper, Teresa K. Attwood, Alain Coletta, Carole A. Goble, Peter Li, Philip McDermott, James Marsh, Tom Oinn, James Sinnott, David Thorne

Proceedings of the Data Integration in the Life Sciences, 4th International Workshop, 2007

2006

Taverna: a tool for building and running workflows of services.

Duncan Hull, Katy Wolstencroft, Robert Stevens, Carole A. Goble, Matthew R. Pocock, Peter Li, Tom Oinn

Nucleic Acids Res., 2006

Web Services for the DDSM and Digital Mammography Research.

Chris Rose, Daniele Turi, Alan R. Williams, Katy Wolstencroft, Christopher J. Taylor

Proceedings of the Digital Mammography, 2006

Protein classification using ontology classification.

Katy Wolstencroft, Phillip W. Lord, Lydia Tabernero, Andy Brass, Robert Stevens

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006

2005

Constructing ontology-driven protein family databases.

Katy Wolstencroft, Robin McEntire, Robert Stevens, Lydia Tabernero, Andy Brass

Bioinform., 2005

A Little Semantic Web Goes a Long Way in Biology.

Katy Wolstencroft, Andy Brass, Ian Horrocks, Phillip W. Lord, Ulrike Sattler, Daniele Turi, Robert Stevens

Proceedings of the Semantic Web - ISWC 2005, 4th International Semantic Web Conference, 2005

Panoply of Utilities in Taverna.

Katy Wolstencroft, Thomas M. Oinn, Carole A. Goble, Justin Ferris, Chris Wroe, Phillip W. Lord, Kevin Glover, Robert Stevens

Proceedings of the First International Conference on e-Science and Grid Technologies (e-Science 2005), 2005