Kathryn Dempsey

According to our database, Kathryn Dempsey authored at least 25 papers between 2008 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

Identification of Biologically Significant Elements Using Correlation Networks in High Performance Computing Environments.

Kathryn Dempsey Cooper, Sachin Pawaskar, Hesham H. Ali

Proceedings of the Bioinformatics and Biomedical Engineering, 2015

2014

Identifying aging-related genes in mouse hippocampus using gateway nodes.

Kathryn Dempsey, Hesham H. Ali

BMC Syst. Biol., 2014

Recognizing Patient Safety Importance through Instrument Validation on Physicians' Assessment of an EHR.

Cherie Noteboom, Kathryn Dempsey, Ann L. Fruhling

Proceedings of the 47th Hawaii International Conference on System Sciences, 2014

Introduction to Data Analysis and Visualization in Biomedical Informatics Minitrack.

Hesham H. Ali, Kathryn Dempsey

Proceedings of the 47th Hawaii International Conference on System Sciences, 2014

On the Robustness of the Biological Correlation Network Model.

Kathryn Dempsey, Hesham H. Ali

Proceedings of the BIOINFORMATICS 2014, 2014

2013

A Parallel Template for Implementing filters for biological Correlation Networks.

Kathryn Dempsey, Vladimir Ufimtsev, Sanjukta Bhowmick, Hesham Ali

Int. J. Comput., 2013

A structure-preserving hybrid-chordal filter for sampling in correlation networks.

Kathryn Dempsey, Tzu-Yi Chen, Sriram Srinivasan, Sanjukta Bhowmick, Hesham H. Ali

Proceedings of the International Conference on High Performance Computing & Simulation, 2013

Analysis of Incrementally Generated Clusters in Biological Networks Using Graph-Theoretic Filters and Ontology Enrichment.

Sean West, Kathryn Dempsey, Sanjukta Bhowmick, Hesham H. Ali

Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks.

Rohan Khazanchi, Kathryn Dempsey, Ishwor Thapa, Hesham H. Ali

Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

On Mining Biological Signals Using Correlation Networks.

Kathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali

Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

Identifying Pathway Proteins in Networks using Convergence.

Kathryn Dempsey, Hesham H. Ali

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

Function-preserving Filters for Sampling in Biological Networks.

Kathryn Dempsey, Sanjukta Bhowmick, Hesham H. Ali

Proceedings of the International Conference on Computational Science, 2012

Functional identification in correlation networks using gene ontology edge annotation.

Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali

Int. J. Comput. Biol. Drug Des., 2012

The Development of Parallel Adaptive Sampling Algorithms for Analyzing Biological Networks.

Kathryn Dempsey, Kanimathi Duraisamy, Sanjukta Bhowmick, Hesham H. Ali

Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012

A Novel Multithreaded Algorithm for Extracting Maximal Chordal Subgraphs.

Mahantesh Halappanavar, John Feo, Kathryn Dempsey, Hesham H. Ali, Sanjukta Bhowmick

Proceedings of the 41st International Conference on Parallel Processing, 2012

On the design of advanced filters for biological networks using graph theoretic properties.

Kathryn Dempsey, Tzu-Yi Chen, Sanjukta Bhowmick, Hesham H. Ali

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

2011

A Parallel Graph Sampling Algorithm for Analyzing Gene Correlation Networks.

Kathryn Dempsey, Kanimathi Duraisamy, Hesham H. Ali, Sanjukta Bhowmick

Proceedings of the International Conference on Computational Science, 2011

A noise reducing sampling approach for uncovering critical properties in large scale biological networks.

Kanimathi Duraisamy, Kathryn Dempsey, Hesham H. Ali, Sanjukta Bhowmick

Proceedings of the 2011 International Conference on High Performance Computing & Simulation, 2011

A Novel Correlation Networks Approach for the Identification of Gene Targets.

Kathryn Dempsey, Stephen Bonasera, Dhundy Bastola, Hesham H. Ali

Proceedings of the 44th Hawaii International International Conference on Systems Science (HICSS-44 2011), 2011

Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search.

Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali

Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Evaluation of essential genes in correlation networks using measures of centrality.

Kathryn Dempsey, Hesham H. Ali

Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

A New Approach for Sequence Analysis: Illustrating an Expanded Bioinformatics View through Exploring Properties of the Prestin Protein.

Kathryn Dempsey, Benjamin Currall, Richard Hallworth, Hesham H. Ali

Proceedings of the Handbook of Research on Computational and Systems Biology, 2011

2010

An intelligent data-centric approach toward identification of conserved motifs in protein sequences.

Kathryn Dempsey, Benjamin Currall, Richard Hallworth, Hesham H. Ali

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2008

MTAP: The Motif Tool Assessment Platform.

Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali

BMC Bioinform., 2008

A parallel architecture for regulatory motif algorithm assessment.

Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali

Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008