K. Joeri van der Velde

According to our database, K. Joeri van der Velde authored at least 18 papers between 2010 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

A Resource for Guiding Data Stewards to Make European Rare Disease Patient Registries FAIR.

Philip van Damme, Pablo Alarcón Moreno, César Henrique Bernabé, Alberto Cámara Ballesteros, Clémence M. A. Le Cornec, Bruna dos Santos Vieira, K. Joeri van der Velde, Shuxin Zhang, Claudio Carta, Ronald Cornet, Peter A. C. 't Hoen, Annika Jacobsen, Morris A. Swertz, Marco Roos, Nirupama Benis

Data Sci. J., January, 2023

Ten quick tips for building FAIR workflows.

Casper de Visser, Lennart F. Johansson, Purva Kulkarni, Hailiang Mei, Pieter B. T. Neerincx, K. Joeri van der Velde, Peter Horvatovich, Alain J. van Gool, Morris A. Swertz, Peter A. C. 't Hoen, Anna Niehues

PLoS Comput. Biol., 2023

Surveyed common data access policies preferences amongst European Reference Networks.

Alberto Cámara Ballesteros, Nirupama Benis, César Henrique Bernabé, Inés de Oliveira Coelho, Clémence M. A. Le Cornec, Aylin Demir, Bruna dos Santos Vieira, Jose Antonio Ramírez, K. Joeri van der Velde, Shuxin Zhang, Ronald Cornet, Annika Jacobsen, Marco Roos, Franz Schaefer, Morris A. Swertz, Mark D. Wilkinson

Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

2022

Blockchain for Genomics: A Systematic Literature Review.

Mohammed Alghazwi, Fatih Turkmen, K. Joeri van der Velde, Dimka Karastoyanova

Distributed Ledger Technol. Res. Pract., 2022

Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data.

Rajaram Kaliyaperumal, Mark D. Wilkinson, Pablo Alarcón Moreno, Nirupama Benis, Ronald Cornet, Bruna dos Santos Vieira, Michel Dumontier, César Henrique Bernabé, Annika Jacobsen, Clémence M. A. Le Cornec, Mario Prieto Godoy, Núria Queralt-Rosinach, Leo J. Schultze Kool, Morris A. Swertz, Philip van Damme, K. Joeri van der Velde, Nawel Lalout, Shuxin Zhang, Marco Roos

J. Biomed. Semant., 2022

2019

MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians.

K. Joeri van der Velde, Floris Imhann, Bart Charbon, Chao Pang, David van Enckevort, Mariska Slofstra, Ruggero Barbieri, Rudi Alberts, Dennis Hendriksen, Fleur D. L. Kelpin, Mark de Haan, Tommy de Boer, Sido Haakma, Connor Stroomberg, Salome Scholtens, Gert-Jan van de Geijn, Eleonora A. M. Festen, Rinse K. Weersma, Morris A. Swertz

Bioinform., 2019

2018

Machine Learning for Multi-Omics Data Integration and Variant Pathogenicity Estimation.

Shuang Li, K. Joeri van der Velde, Morris A. Swertz

Proceedings of the 14th IEEE International Conference on e-Science, 2018

2016

MOLGENIS/connect: a system for semi-automatic integration of heterogeneous phenotype data with applications in biobanks.

Chao Pang, David van Enckevort, Mark de Haan, Fleur D. L. Kelpin, Jonathan Jetten, Dennis Hendriksen, Tommy de Boer, Bart Charbon, Erwin Winder, K. Joeri van der Velde, Dany Doiron, Isabel Fortier, Hans L. Hillege, Morris A. Swertz

Bioinform., 2016

2015

MOLGENIS/OMX for multi-omics and personalized medicine.

Morris A. Swertz, K. Joeri van der Velde

J. Clin. Bioinform., 2015

BiobankConnect: software to rapidly connect data elements for pooled analysis across biobanks using ontological and lexical indexing.

Chao Pang, Dennis Hendriksen, Martijn Dijkstra, K. Joeri van der Velde, Joël Kuiper, Hans L. Hillege, Morris A. Swertz

J. Am. Medical Informatics Assoc., 2015

Pheno2Geno - High-throughput generation of genetic markers and maps from molecular phenotypes for crosses between inbred strains.

Konrad Zych, Yang Li, K. Joeri van der Velde, Ronny Joosen, Wilco Ligterink, Ritsert C. Jansen, Danny Arends

BMC Bioinform., 2015

SORTA: a system for ontology-based re-coding and technical annotation of biomedical phenotype data.

Chao Pang, Annet Sollie, Anna Sijtsma, Dennis Hendriksen, Bart Charbon, Mark de Haan, Tommy de Boer, Fleur D. L. Kelpin, Jonathan Jetten, K. Joeri van der Velde, Nynke Smidt, Rolf Sijmons, Hans L. Hillege, Morris A. Swertz

Database J. Biol. Databases Curation, 2015

2014

WormQTL^HD - a web database for linking human disease to natural variation data in <i>C. elegans</i>.

K. Joeri van der Velde, Mark de Haan, Konrad Zych, Danny Arends, L. Basten Snoek, Jan E. Kammenga, Ritsert C. Jansen, Morris A. Swertz, Yang Li

Nucleic Acids Res., 2014

2013

WormQTL - public archive and analysis web portal for natural variation data in <i>Caenorhabditis</i> spp.

L. Basten Snoek, K. Joeri van der Velde, Danny Arends, Yang Li, Antje Beyer, Mark Elvin, Jasmin Fisher, Alex Hajnal, Michael O. Hengartner, Gino B. Poulin, Miriam Rodriguez, Tobias Schmid, Sabine Schrimpf, Feng Xue, Ritsert C. Jansen, Jan E. Kammenga, Morris A. Swertz

Nucleic Acids Res., 2013

2012

xQTL workbench: a scalable web environment for multi-level QTL analysis.

Danny Arends, K. Joeri van der Velde, Pjotr Prins, Karl W. Broman, Steffen Möller, Ritsert C. Jansen, Morris A. Swertz

Bioinform., 2012

Bioinformatics tools and database resources for systems genetics analysis in mice - a short review and an evaluation of future needs.

Caroline Durrant, Morris A. Swertz, Rudi Alberts, Danny Arends, Steffen Möller, Richard Mott, Pjotr Prins, K. Joeri van der Velde, Ritsert C. Jansen, Klaus Schughart

Briefings Bioinform., 2012

2011

OntoCAT - simple ontology search and integration in Java, R and REST/JavaScript.

Tomasz Adamusiak, Tony Burdett, Natalja Kurbatova, K. Joeri van der Velde, Niran Abeygunawardena, Despoina Antonakaki, Misha Kapushesky, Helen E. Parkinson, Morris A. Swertz

BMC Bioinform., 2011

2010

The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button.

Morris A. Swertz, Martijn Dijkstra, Tomasz Adamusiak, K. Joeri van der Velde, Alexandros Kanterakis, Erik T. Roos, Joris Lops, Gudmundur A. Thorisson, Danny Arends, George Byelas, Juha Muilu, Anthony J. Brookes, Engbert O. de Brock, Ritsert C. Jansen, Helen E. Parkinson

BMC Bioinform., 2010