K. E. Ravikumar

According to our database, K. E. Ravikumar authored at least 35 papers between 2003 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track.

Sumit Madan, Justyna Szostak, Ravikumar Komandur Elayavilli, Richard Tzong-Han Tsai, Mehdi Ali, Longhua Qian, Majid Rastegar-Mojarad, Julia Hoeng, Juliane Fluck

Database J. Biol. Databases Curation, 2019

2018

Extracting chemical-protein relations using attention-based neural networks.

Sijia Liu, Feichen Shen, Ravikumar Komandur Elayavilli, Yanshan Wang, Majid Rastegar-Mojarad, Vipin Chaudhary, Hongfang Liu

Database J. Biol. Databases Curation, 2018

Improving the Accuracy of a Clinical Decision Support System for Cervical Cancer Screening and Surveillance.

K. E. Ravikumar, Kathy L. MacLaughlin, Marianne R. Scheitel, Maya Kessler, Kavishwar B. Wagholikar, Hongfang Liu, Rajeev Chaudhry

Appl. Clin. Inform., 2018

Identification of Genetic Causality Statements in Medline Abstracts Leveraging Distant Supervision.

Liwei Wang, Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Yanshan Wang, Hongfang Liu

Proceedings of the IEEE International Conference on Healthcare Informatics Workshops, 2018

2017

Leveraging word embeddings and medical entity extraction for biomedical dataset retrieval using unstructured texts.

Yanshan Wang, Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Hongfang Liu

Database J. Biol. Databases Curation, 2017

BELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences.

K. E. Ravikumar, Majid Rastegar-Mojarad, Hongfang Liu

Database J. Biol. Databases Curation, 2017

Leveraging both Structured and Unstructured Data for Precision Information Retrieval.

Yanshan Wang, Ravikumar Komandur Elayavilli, Majid Rastegar-Mojarad, Hongfang Liu

Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017

2016

Erratum to: Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature.

Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Dingcheng Li, Jean-Pierre A. Kocher, Hongfang Liu

BMC Bioinform., 2016

BELTracker: evidence sentence retrieval for BEL statements.

Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Hongfang Liu

Database J. Biol. Databases Curation, 2016

An Ensemble Model of Clinical Information Extraction and Information Retrieval for Clinical Decision Support.

Yanshan Wang, Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Sijia Liu, Hongfang Liu

Proceedings of The Twenty-Fifth Text REtrieval Conference, 2016

MutD - A PubMed Scale Resource for Protein Mutation-Disease Relations through Bio-Medical Literature Mining.

Ravikumar Komandur Elayavilli, Majid Rastegar-Mojarad, Hongfang Liu

Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

Prioritizing Adverse Drug Reaction and Drug Repositioning Candidates Generated by Literature-Based Discovery.

Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Liwei Wang, Rashmi Prasad, Hongfang Liu

Proceedings of the 7th ACM International Conference on Bioinformatics, 2016

2015

The CHEMDNER corpus of chemicals and drugs and its annotation principles.

Martin Krallinger, Obdulia Rabal, Florian Leitner, Miguel Vazquez, David Salgado, Zhiyong Lu, Robert Leaman, Yanan Lu, Donghong Ji, Daniel M. Lowe, Roger A. Sayle, Riza Theresa Batista-Navarro, Rafal Rak, Torsten Huber, Tim Rocktäschel, Sérgio Matos, David Campos, Buzhou Tang, Hua Xu, Tsendsuren Munkhdalai, Keun Ho Ryu, S. V. Ramanan, P. Senthil Nathan, Slavko Zitnik, Marko Bajec, Lutz Weber, Matthias Irmer, Saber A. Akhondi, Jan A. Kors, Shuo Xu, Xin An, Utpal Kumar Sikdar, Asif Ekbal, Masaharu Yoshioka, Thaer M. Dieb, Miji Choi, Karin Verspoor, Madian Khabsa, C. Lee Giles, Hongfang Liu, Ravikumar Komandur Elayavilli, Andre Lamurias, Francisco M. Couto, Hong-Jie Dai, Richard Tzong-Han Tsai, Caglar Ata, Tolga Can, Anabel Usie, Rui Alves, Isabel Segura-Bedmar, Paloma Martínez, Julen Oyarzabal, Alfonso Valencia

J. Cheminformatics, 2015

Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature.

Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Dingcheng Li, Jean-Pierre A. Kocher, Hongfang Liu

BMC Bioinform., 2015

Assessing the Need of Discourse-Level Analysis in Identifying Evidence of Drug-Disease Relations in Scientific Literature.

Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Dingcheng Li, Hongfang Liu

Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

A Frequency-based Strategy of Obtaining Sentences from Clinical Data Repository for Crowdsourcing.

Dingcheng Li, Majid Rastegar-Mojarad, Yanpeng Li, Sunghwan Sohn, Saeed Mehrabi, Ravikumar Komandur Elayavilli, Yue Yu, Hongfang Liu

Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015

A new method for prioritizing drug repositioning candidates extracted by literature-based discovery.

Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Dingcheng Li, Rashmi Prasad, Hongfang Liu

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

A frequency-filtering strategy of obtaining PHI-free sentences from clinical data repository.

Dingcheng Li, Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Yanshan Wang, Saeed Mehrabi, Yue Yu, Sunghwan Sohn, Yanpeng Li, Naveed Afzal, Hongfang Liu

Proceedings of the 6th ACM Conference on Bioinformatics, 2015

Natural Language Processing facilitates delivery of individualized recommendations at the point of care.

K. E. Ravikumar, Rajeev Chaudhry, James J. Masanz, Joshua J. Pankratz, Jane L. Shellum, Steve G. Peters, Ronald A. Hankey, Daniel J. Cronk, Jennifer J. Boysen, Kristin Pavek, Robert Roden, Hongfang Liu

Proceedings of the AMIA 2015, 2015

Evaluation of the accuracy of CDS for cervical cancer screening and surveillance.

Kathy L. MacLaughlin, Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Marianne R. Scheitel, Hongfang Liu, Rajeev Chaudhry

Proceedings of the AMIA 2015, 2015

2014

Towards Pathway Curation Through Literature Mining - A Case Study Using PharmGKB.

K. E. Ravikumar, Kavishwar B. Wagholikar, Hongfang Liu

Proceedings of the Biocomputing 2014: Proceedings of the Pacific Symposium, 2014

Challenges in adapting text mining for full text articles to assist pathway curation.

K. E. Ravikumar, Kavishwar B. Wagholikar, Hongfang Liu

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

NLP enhances Quality Care Measures in Heart Failure.

Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Hongfang Liu

Proceedings of the AMIA 2014, 2014

2013

Comprehensive temporal information detection from clinical text: medical events, time, and TLINK identification.

Sunghwan Sohn, Kavishwar B. Wagholikar, Dingcheng Li, Siddhartha Jonnalagadda, Cui Tao, Ravikumar Komandur Elayavilli, Hongfang Liu

J. Am. Medical Informatics Assoc., 2013

Multi-Objective Optimization for Clustering of Medical Publications.

Asif Ekbal, Sriparna Saha, Diego Mollá, K. E. Ravikumar

Proceedings of the Australasian Language Technology Association Workshop, 2013

2012

Literature mining of protein-residue associations with graph rules learned through distant supervision.

K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall, Karin Verspoor

J. Biomed. Semant., 2012

Three Questions About Clinical Information Retrieval.

Stephen T. Wu, James J. Masanz, K. E. Ravikumar, Hongfang Liu

Proceedings of The Twenty-First Text REtrieval Conference, 2012

Asthma Status Identification with Natural Language Processing.

Stephen T. Wu, Young J. Juhn, Sunghwan Sohn, Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Siddhartha Jonnalagadda, Hongfang Liu

Proceedings of the AMIA 2012, 2012

2011

Pattern Learning through Distant Supervision for Extraction of Protein-Residue Associations in the Biomedical Literature.

K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall, Karin Verspoor

Proceedings of the 10th International Conference on Machine Learning and Applications and Workshops, 2011

From Graphs to Events: A Subgraph Matching Approach for Information Extraction from Biomedical Text.

Haibin Liu, Ravikumar Komandur Elayavilli, Karin Verspoor

Proceedings of BioNLP Shared Task 2011 Workshop, Portland, Oregon, USA, June 24, 2011, 2011

2009

Information Extraction of Protein Phosphorylation from Biomedical Literature.

Meenakshi Narayanaswamy, K. E. Ravikumar, Zhang-Zhi Hu, K. Vijay-Shanker, Cathy H. Wu

Proceedings of the Information Retrieval in Biomedicine, 2009

2006

An online literature mining tool for protein phosphorylation.

X. Yuan, Zhang-Zhi Hu, H. T. Wu, Manabu Torii, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu

Bioinform., 2006

2005

Literature mining and database annotation of protein phosphorylation using a rule-based system.

Zhang-Zhi Hu, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu

Bioinform., 2005

Beyond the clause: extraction of phosphorylation information from medline abstracts.

Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker

Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005

2003

A Biological Named Entity Recognizer.

Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker

Proceedings of the 8th Pacific Symposium on Biocomputing, 2003