Jürgen Pleiss

According to our database, Jürgen Pleiss authored at least 29 papers between 1996 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

MetaConfigurator: A User-Friendly Tool for Editing Structured Data Files.

Felix Neubauer, Paul Bredl, Minye Xu, Keyuriben Patel, Jürgen Pleiss, Benjamin Uekermann

Datenbank-Spektrum, July, 2024

Research Data Management in Simulation Science: Infrastructure, Tools, and Applications.

Bernd Flemisch, Sibylle Hermann, Melanie Herschel, Dirk Pflüger, Jürgen Pleiss, Jan Range, Sarbani Roy, Makoto Takamoto, Benjamin Uekermann

Datenbank-Spektrum, July, 2024

2023

Ontology-Based Laboratory Data Acquisition With EnzymeML for Process Simulation of Biocatalytic Reactors.

Alexander S. Behr, Elnaz Abbaspour, Katrin Rosenthal, Jürgen Pleiss, Norbert Kockmann

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2021

Visual Analysis of Large-Scale Protein-Ligand Interaction Data.

Karsten Schatz, Juan José Franco-Moreno, Marco Schäfer, Alexander S. Rose, Valerio Ferrario, Jürgen Pleiss, Pere-Pau Vázquez, Thomas Ertl, Michael Krone

Comput. Graph. Forum, 2021

Analyzing the similarity of protein domains by clustering Molecular Surface Maps.

Karsten Schatz, Florian Frieß, Marco Schäfer, Patrick C. F. Buchholz, Jürgen Pleiss, Thomas Ertl, Michael Krone

Comput. Graph., 2021

2020

Simulation Foundry: Automated and F.A.I.R. Molecular Modeling.

Gudrun Gygli, Jürgen Pleiss

J. Chem. Inf. Model., 2020

2019

Molecular Sombreros of 1CRL.

Karsten Schatz, Michael Krone, Tabea L. Bauer, Valerio Ferrario, Jürgen Pleiss, Thomas Ertl

Dataset, March, 2019

Molecular Sombreros: Abstract Visualization of Binding Sites within Proteins.

Karsten Schatz, Michael Krone, Tabea L. Bauer, Valerio Ferrario, Jürgen Pleiss, Thomas Ertl

Proceedings of the Eurographics Workshop on Visual Computing for Biology and Medicine, 2019

2017

Molecular Surface Maps.

Michael Krone, Florian Friess, Katrin Scharnowski, Guido Reina, Silvia Fademrecht, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl

IEEE Trans. Vis. Comput. Graph., 2017

2014

Comparative Visualization of Molecular Surfaces Using Deformable Models.

Katrin Scharnowski, Michael Krone, Guido Reina, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl

Comput. Graph. Forum, 2014

2013

Interactive Extraction and Tracking of Biomolecular Surface Features.

Michael Krone, Guido Reina, Christoph Schulz, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl

Comput. Graph. Forum, 2013

2011

Systematic benchmarking of large molecular dynamics simulations employing GROMACS on massive multiprocessing facilities.

Christian C. Gruber, Jürgen Pleiss

J. Comput. Chem., 2011

Interactive Exploration of Protein Cavities.

Michael Krone, Martin Falk, Sascha Rehm, Jürgen Pleiss, Thomas Ertl

Comput. Graph. Forum, 2011

The Laccase Engineering Database: a classification and analysis system for laccases and related multicopper oxidases.

Demet Sirim, Florian Wagner, Lei Wang, Rolf D. Schmid, Jürgen Pleiss

Database J. Biol. Databases Curation, 2011

2009

The PHA Depolymerase Engineering Database: A systematic analysis tool for the diverse family of polyhydroxyalkanoate (PHA) depolymerases.

Michael Knoll, Thomas M. Hamm, Florian Wagner, Virginia Martinez, Jürgen Pleiss

BMC Bioinform., 2009

2008

Visual Abstractions of Solvent Pathlines near Protein Cavities.

Katrin Bidmon, Sebastian Grottel, Fabian Bös, Jürgen Pleiss, Thomas Ertl

Comput. Graph. Forum, 2008

2007

The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family.

Markus Fischer, Michael Knoll, Demet Sirim, Florian Wagner, Sonja Funke, Jürgen Pleiss

Bioinform., 2007

Time-Based Haptic Analysis of Protein Dynamics.

Katrin Bidmon, Guido Reina, Fabian Bös, Jürgen Pleiss, Thomas Ertl

Proceedings of the Second Joint EuroHaptics Conference and Symposium on Haptic Interfaces for Virtual Environment and Teleoperator Systems, 2007

2006

DWARF - a data warehouse system for analyzing protein families.

Markus Fischer, Quan K. Thai, Melanie Grieb, Jürgen Pleiss

BMC Bioinform., 2006

GriCoL: A Language for Scientific Grids.

Natalia Currle-Linde, Panagiotis A. Adamidis, Michael M. Resch, Fabian Bös, Jürgen Pleiss

Proceedings of the Second International Conference on e-Science and Grid Technologies (e-Science 2006), 2006

2005

A Model of Specificity and Selectivity of Mammalian Cytochrome P450 Monooxy-genases.

Alexander Seifert, Michael Krahn, Stephan Tatzel, Rolf D. Schmid, Jürgen Pleiss

Proceedings of the German Conference on Bioinformatics (GCB 2005), Hamburg, 2005

2004

The database of epoxide hydrolases and haloalkane dehalogenases: one structure, many functions.

Sandra Barth, Markus Fischer, Rolf D. Schmid, Jürgen Pleiss

Bioinform., 2004

High-throughput molecular dynamics simulations: Long and short range effects of mutations on substrate specificity.

Fabian Bös, Natalia Currle-Linde, Peggy Lindner, Rolf D. Schmid, Jürgen Pleiss

Proceedings of the German Conference on Bioinformatics (GCB 2004), Bielefeld, 2004

2003

The Lipase Engineering Database: a navigation and analysis tool for protein families.

Markus Fischer, Jürgen Pleiss

Nucleic Acids Res., 2003

2001

From sequence to function: a quantitative model of lipase enantioselectivity.

Jürgen Pleiss, Christian Gentner, Holger Scheib, Tanja Schulz, Rolf D. Schmid

Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

1999

Understanding the sequence-structure-function relationship of lipases.

Markus Fischer, Tanja Schulz, Jürgen Pleiss, Rolf D. Schmid

Proceedings of the German Conference on Bioinformatics, 1999

1998

Lipase Engineering Database.

Markus Fischer, Christoph Kaiser, Jürgen Pleiss, Rolf D. Schmid

Proceedings of the German Conference on Bioinformatics, 1998

Integrating Molecular Modeling Tools and Virtual Reality Engines: An Architecture for a Highly Immersive Molecular Modeling (HIMM) Environment.

Robert C. Drees, Jürgen Pleiss, Rolf D. Schmid, Dieter Roller

Proceedings of the Computer Graphics International Conference, 1998

1996

Highly Immersive Molecular Modeling (HIMM): An Architecture for the Integration of Molecular Modeling and Virtual Reality.

Robert C. Drees, Jürgen Pleiss, Rolf D. Schmid

Proceedings of the German Conference on Bioinformatics, 1996