Junmei Wang
Orcid: 0009-0004-6482-5949
According to our database1,
Junmei Wang
authored at least 81 papers
between 1999 and 2024.
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Bibliography
2024
Utilizing BERT for Information Retrieval: Survey, Applications, Resources, and Challenges.
ACM Comput. Surv., July, 2024
Emerging Opportunities of Using Large Language Models for Translation Between Drug Molecules and Indications.
CoRR, 2024
2023
Distribution of Bound Conformations in Conformational Ensembles for X-ray Ligands Predicted by the ANI-2X Machine Learning Potential.
J. Chem. Inf. Model., November, 2023
Model Checking of Possibilistic Linear-Time Properties Based on Generalized Possibilistic Decision Processes.
IEEE Trans. Fuzzy Syst., October, 2023
J. Chem. Inf. Model., June, 2023
Unpolarized laser method for infrared spectrum calculation of amide I C=O bonds in proteins using molecular dynamics simulation.
Comput. Biol. Medicine, June, 2023
J. Chem. Inf. Model., February, 2023
SPRF: A semantic Pseudo-relevance Feedback enhancement for information retrieval via ConceptNet.
Knowl. Based Syst., 2023
Development and test of highly accurate endpoint free energy methods. 2: Prediction of logarithm of <i>n</i>-octanol-water partition coefficient (logP) for druglike molecules using MM-PBSA method.
J. Comput. Chem., 2023
Development and test of highly accurate endpoint free energy methods. 1: Evaluation of ABCG2 charge model on solvation free energy prediction and optimization of atom radii suitable for more accurate solvation free energy prediction by the PBSA method.
J. Comput. Chem., 2023
Proceedings of the 2023 3rd International Conference on Big Data, 2023
2022
Effects of a New Media Data Interaction System on Teaching Efficiency in Vocational Education.
Int. J. Emerg. Technol. Learn., April, 2022
ALipSol: An Attention-Driven Mixture-of-Experts Model for Lipophilicity and Solubility Prediction.
J. Chem. Inf. Model., 2022
J. Chem. Inf. Model., 2022
A probabilistic framework for integrating sentence-level semantics via BERT into pseudo-relevance feedback.
Inf. Process. Manag., 2022
Proceedings of the IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology, 2022
2021
ALeRT-COVID: Attentive Lockdown-awaRe Transfer Learning for Predicting COVID-19 Pandemics in Different Countries.
J. Heal. Informatics Res., 2021
VAD-MM/GBSA: A Variable Atomic Dielectric MM/GBSA Model for Improved Accuracy in Protein-Ligand Binding Free Energy Calculations.
J. Chem. Inf. Model., 2021
Incorporating structural similarity into a scoring function to enhance the prediction of binding affinities.
J. Cheminformatics, 2021
In silico binding profile characterization of SARS-CoV-2 spike protein and its mutants bound to human ACE2 receptor.
Briefings Bioinform., 2021
Briefings Bioinform., 2021
Machine learning on ligand-residue interaction profiles to significantly improve binding affinity prediction.
Briefings Bioinform., 2021
Proceedings of the IEEE International Conference on Smart Internet of Things, 2021
Effects of ENSO on Climate and Garlic Yield in Main Garlic Production Areas of China.
Proceedings of the IEEE International Conference on Smart Internet of Things, 2021
2020
A Multi-directional Approach for Missing Value Estimation in Multivariate Time Series Clinical Data.
J. Heal. Informatics Res., 2020
Development and Evaluation of MM/GBSA Based on a Variable Dielectric GB Model for Predicting Protein-Ligand Binding Affinities.
J. Chem. Inf. Model., 2020
Fast Identification of Possible Drug Treatment of Coronavirus Disease-19 (COVID-19) through Computational Drug Repurposing Study.
J. Chem. Inf. Model., 2020
How Well Does the Extended Linear Interaction Energy Method Perform in Accurate Binding Free Energy Calculations?
J. Chem. Inf. Model., 2020
A Pseudo-relevance feedback framework combining relevance matching and semantic matching for information retrieval.
Inf. Process. Manag., 2020
2019
Calculate protein-ligand binding affinities with the extended linear interaction energy method: application on the Cathepsin S set in the D3R Grand Challenge 3.
J. Comput. Aided Mol. Des., 2019
Significantly different effects of tetrahydroberberrubine enantiomers on dopamine D1/D2 receptors revealed by experimental study and integrated in silico simulation.
J. Comput. Aided Mol. Des., 2019
Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019
Estimating Missing Values in Multivariate-Time-Series Clinical Data using Gradient Boosting Tree on Temporal and Cross-variable Features.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019
Proceedings of the Artificial Intelligence and Security - 5th International Conference, 2019
Proceedings of the 46th Computing in Cardiology, 2019
2018
Cheminformatic Insight into the Differences between Terrestrial and Marine Originated Natural Products.
J. Chem. Inf. Model., 2018
Molecular Dynamics Simulations Revealed the Regulation of Ligands to the Interactions between Androgen Receptor and Its Coactivator.
J. Chem. Inf. Model., 2018
Int. J. Inf. Technol. Decis. Mak., 2018
Based on Data Analysis and JC Retrofit Scheme of Dam Risk Function and the Simulation Experiment.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018
The Internet of Things and Big Data in the Submarine Cable Release Process of Finite Element Simulation and Matlab Simulation.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018
2014
P-loop Conformation Governed Crizotinib Resistance in G2032R-Mutated ROS1 Tyrosine Kinase: Clues from Free Energy Landscape.
PLoS Comput. Biol., 2014
J. Cheminformatics, 2014
2013
J. Chem. Inf. Model., 2013
Modeling Compound-Target Interaction Network of Traditional Chinese Medicines for Type II Diabetes Mellitus: Insight for Polypharmacology and Drug Design.
J. Chem. Inf. Model., 2013
Drug-likeness analysis of traditional Chinese medicines: 2. Characterization of scaffold architectures for drug-like compounds, non-drug-like compounds, and natural compounds from traditional Chinese medicines.
J. Cheminformatics, 2013
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013
2012
Develop and Test a Solvent Accessible Surface Area-Based Model in Conformational Entropy Calculations.
J. Chem. Inf. Model., 2012
ADMET Evaluation in Drug Discovery. 11. PharmacoKinetics Knowledge Base (PKKB): A Comprehensive Database of Pharmacokinetic and Toxic Properties for Drugs.
J. Chem. Inf. Model., 2012
Drug-likeness analysis of traditional Chinese medicines: 1. property distributions of drug-like compounds, non-drug-like compounds and natural compounds from traditional Chinese medicines.
J. Cheminformatics, 2012
2011
Assessing the Performance of the MM/PBSA and MM/GBSA Methods. 1. The Accuracy of Binding Free Energy Calculations Based on Molecular Dynamics Simulations.
J. Chem. Inf. Model., 2011
Application of molecular dynamics simulations in molecular property prediction II: Diffusion coefficient.
J. Comput. Chem., 2011
Assessing the performance of the molecular mechanics/Poisson Boltzmann surface area and molecular mechanics/generalized Born surface area methods. II. The accuracy of ranking poses generated from docking.
J. Comput. Chem., 2011
2010
2009
Aqueous Solubility Prediction Based on Weighted Atom Type Counts and Solvent Accessible Surface Areas.
J. Chem. Inf. Model., 2009
2007
Development of Reliable Aqueous Solubility Models and Their Application in Druglike Analysis.
J. Chem. Inf. Model., 2007
ADME Evaluation in Drug Discovery, 8. The Prediction of Human Intestinal Absorption by a Support Vector Machine.
J. Chem. Inf. Model., 2007
ADME Evaluation in Drug Discovery, 6. Can Oral Bioavailability in Humans Be Effectively Predicted by Simple Molecular Property-Based Rules?
J. Chem. Inf. Model., 2007
ADME Evaluation in Drug Discovery, 7. Prediction of Oral Absorption by Correlation and Classification.
J. Chem. Inf. Model., 2007
J. Chem. Inf. Model., 2007
2006
Genetic Algorithm-Optimized QSPR Models for Bioavailability, Protein Binding, and Urinary Excretion.
J. Chem. Inf. Model., 2006
Proceedings of the 22nd International Conference on Data Engineering, 2006
2005
Junmei Wang, Romain M. Wolf, James W. Caldwell, Peter A. Kollman, and David A. Case, "Development and testing of a general amber force field" Journal of Computational Chemistry(2004) 25(9) 1157-1174.
J. Comput. Chem., 2005
Proceedings of the Database Systems for Advanced Applications, 2005
Proceedings of the 2005 ACM CIKM International Conference on Information and Knowledge Management, Bremen, Germany, October 31, 2005
Mining in Spatiotemporal Databases.
Proceedings of the Spatial Databases: Technologies, Techniques and Trends, 2005
2004
Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 2004
Proceedings of the Database Systems for Advances Applications, 2004
2003
A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations.
J. Comput. Chem., 2003
2001
Automatic parameterization of force field by systematic search and genetic algorithms.
J. Comput. Chem., 2001
2000
How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules?
J. Comput. Chem., 2000
1999
Applications of Genetic Algorithms on the Structure-Activity Relationship Analysis of Some Cinnamamides.
J. Chem. Inf. Comput. Sci., 1999