Junmei Wang

Orcid: 0009-0004-6482-5949

According to our database1, Junmei Wang authored at least 81 papers between 1999 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2024
Utilizing BERT for Information Retrieval: Survey, Applications, Resources, and Challenges.
ACM Comput. Surv., July, 2024

Emerging Opportunities of Using Large Language Models for Translation Between Drug Molecules and Indications.
CoRR, 2024

2023
Distribution of Bound Conformations in Conformational Ensembles for X-ray Ligands Predicted by the ANI-2X Machine Learning Potential.
J. Chem. Inf. Model., November, 2023

Model Checking of Possibilistic Linear-Time Properties Based on Generalized Possibilistic Decision Processes.
IEEE Trans. Fuzzy Syst., October, 2023

AmberTools.
J. Chem. Inf. Model., October, 2023

Molecular Generation with Reduced Labeling through Constraint Architecture.
J. Chem. Inf. Model., June, 2023

Unpolarized laser method for infrared spectrum calculation of amide I C=O bonds in proteins using molecular dynamics simulation.
Comput. Biol. Medicine, June, 2023

Phosphorylation at Ser289 Enhances the Oligomerization of Tau Repeat R2.
J. Chem. Inf. Model., February, 2023

SPRF: A semantic Pseudo-relevance Feedback enhancement for information retrieval via ConceptNet.
Knowl. Based Syst., 2023

Development and test of highly accurate endpoint free energy methods. 2: Prediction of logarithm of <i>n</i>-octanol-water partition coefficient (logP) for druglike molecules using MM-PBSA method.
J. Comput. Chem., 2023

Development and test of highly accurate endpoint free energy methods. 1: Evaluation of ABCG2 charge model on solvation free energy prediction and optimization of atom radii suitable for more accurate solvation free energy prediction by the PBSA method.
J. Comput. Chem., 2023

Research on Asparagus Recognition Based on Deep Learning.
IEEE Access, 2023

Empirical Study on the Factors Influencing Asparagus Prices Based on VAR Model.
Proceedings of the 2023 3rd International Conference on Big Data, 2023

2022
Effects of a New Media Data Interaction System on Teaching Efficiency in Vocational Education.
Int. J. Emerg. Technol. Learn., April, 2022

ALipSol: An Attention-Driven Mixture-of-Experts Model for Lipophilicity and Solubility Prediction.
J. Chem. Inf. Model., 2022

Preserving the Integrity of Empirical Force Fields.
J. Chem. Inf. Model., 2022

Stable Cavitation Interferes with Aβ<sub>16-22</sub> Oligomerization.
J. Chem. Inf. Model., 2022

A probabilistic framework for integrating sentence-level semantics via BERT into pseudo-relevance feedback.
Inf. Process. Manag., 2022

A Concept Net-based semantic constraint method for query expansion.
Proceedings of the IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology, 2022

2021
ALeRT-COVID: Attentive Lockdown-awaRe Transfer Learning for Predicting COVID-19 Pandemics in Different Countries.
J. Heal. Informatics Res., 2021

VAD-MM/GBSA: A Variable Atomic Dielectric MM/GBSA Model for Improved Accuracy in Protein-Ligand Binding Free Energy Calculations.
J. Chem. Inf. Model., 2021

Incorporating structural similarity into a scoring function to enhance the prediction of binding affinities.
J. Cheminformatics, 2021

In silico binding profile characterization of SARS-CoV-2 spike protein and its mutants bound to human ACE2 receptor.
Briefings Bioinform., 2021

Landscape of drug-resistance mutations in kinase regulatory hotspots.
Briefings Bioinform., 2021

Machine learning on ligand-residue interaction profiles to significantly improve binding affinity prediction.
Briefings Bioinform., 2021

The effect of COVID-19 on garlic prices.
Proceedings of the IEEE International Conference on Smart Internet of Things, 2021

Effects of ENSO on Climate and Garlic Yield in Main Garlic Production Areas of China.
Proceedings of the IEEE International Conference on Smart Internet of Things, 2021

2020
A Multi-directional Approach for Missing Value Estimation in Multivariate Time Series Clinical Data.
J. Heal. Informatics Res., 2020

Development and Evaluation of MM/GBSA Based on a Variable Dielectric GB Model for Predicting Protein-Ligand Binding Affinities.
J. Chem. Inf. Model., 2020

Fast Identification of Possible Drug Treatment of Coronavirus Disease-19 (COVID-19) through Computational Drug Repurposing Study.
J. Chem. Inf. Model., 2020

How Well Does the Extended Linear Interaction Energy Method Perform in Accurate Binding Free Energy Calculations?
J. Chem. Inf. Model., 2020

A Pseudo-relevance feedback framework combining relevance matching and semantic matching for information retrieval.
Inf. Process. Manag., 2020

2019
Development and Testing of Druglike Screening Libraries.
J. Chem. Inf. Model., 2019

Calculate protein-ligand binding affinities with the extended linear interaction energy method: application on the Cathepsin S set in the D3R Grand Challenge 3.
J. Comput. Aided Mol. Des., 2019

Significantly different effects of tetrahydroberberrubine enantiomers on dopamine D1/D2 receptors revealed by experimental study and integrated in silico simulation.
J. Comput. Aided Mol. Des., 2019

CCNU_IRGroup @ TREC 2019 Deep Learning Track.
Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

Estimating Missing Values in Multivariate-Time-Series Clinical Data using Gradient Boosting Tree on Temporal and Cross-variable Features.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019

Input-Output Analysis of Chinese National Agricultural Science and Technology Park.
Proceedings of the Artificial Intelligence and Security - 5th International Conference, 2019

TASP: A Time-Phased Model for Sepsis Prediction.
Proceedings of the 46th Computing in Cardiology, 2019

2018
Cheminformatic Insight into the Differences between Terrestrial and Marine Originated Natural Products.
J. Chem. Inf. Model., 2018

Molecular Dynamics Simulations Revealed the Regulation of Ligands to the Interactions between Androgen Receptor and Its Coactivator.
J. Chem. Inf. Model., 2018

Factorial-Quality Scalar and an Extension of ELECTRE in Intuitionistic Fuzzy Sets.
Int. J. Inf. Technol. Decis. Mak., 2018

Based on Data Analysis and JC Retrofit Scheme of Dam Risk Function and the Simulation Experiment.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

Traffic Accident Time Series Analysis.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

The Internet of Things and Big Data in the Submarine Cable Release Process of Finite Element Simulation and Matlab Simulation.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

Safety Traceability System of Livestock and Poultry Industrial Chain.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

Prediction of Garlic Price Based on ARIMA Model.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

The Traceability Information Management Platform of Duck Product Industry Chain.
Proceedings of the Cloud Computing and Security - 4th International Conference, 2018

2014
P-loop Conformation Governed Crizotinib Resistance in G2032R-Mutated ROS1 Tyrosine Kinase: Clues from Free Energy Landscape.
PLoS Comput. Biol., 2014

MORT: a powerful foundational library for computational biology and CADD.
J. Cheminformatics, 2014

2013
Accelerated Conformational Entropy Calculations Using Graphic Processing Units.
J. Chem. Inf. Model., 2013

Modeling Compound-Target Interaction Network of Traditional Chinese Medicines for Type II Diabetes Mellitus: Insight for Polypharmacology and Drug Design.
J. Chem. Inf. Model., 2013

Drug-likeness analysis of traditional Chinese medicines: 2. Characterization of scaffold architectures for drug-like compounds, non-drug-like compounds, and natural compounds from traditional Chinese medicines.
J. Cheminformatics, 2013

A GPU based Conformational Entropy Calculation Method.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

2012
Develop and Test a Solvent Accessible Surface Area-Based Model in Conformational Entropy Calculations.
J. Chem. Inf. Model., 2012

ADMET Evaluation in Drug Discovery. 11. PharmacoKinetics Knowledge Base (PKKB): A Comprehensive Database of Pharmacokinetic and Toxic Properties for Drugs.
J. Chem. Inf. Model., 2012

A rule-based algorithm for automatic bond type perception.
J. Cheminformatics, 2012

Drug-likeness analysis of traditional Chinese medicines: 1. property distributions of drug-like compounds, non-drug-like compounds and natural compounds from traditional Chinese medicines.
J. Cheminformatics, 2012

2011
Assessing the Performance of the MM/PBSA and MM/GBSA Methods. 1. The Accuracy of Binding Free Energy Calculations Based on Molecular Dynamics Simulations.
J. Chem. Inf. Model., 2011

Application of molecular dynamics simulations in molecular property prediction II: Diffusion coefficient.
J. Comput. Chem., 2011

Assessing the performance of the molecular mechanics/Poisson Boltzmann surface area and molecular mechanics/generalized Born surface area methods. II. The accuracy of ranking poses generated from docking.
J. Comput. Chem., 2011

2010
Drug and Drug Candidate Building Block Analysis.
J. Chem. Inf. Model., 2010

2009
Aqueous Solubility Prediction Based on Weighted Atom Type Counts and Solvent Accessible Surface Areas.
J. Chem. Inf. Model., 2009

2007
Development of Reliable Aqueous Solubility Models and Their Application in Druglike Analysis.
J. Chem. Inf. Model., 2007

ADME Evaluation in Drug Discovery, 8. The Prediction of Human Intestinal Absorption by a Support Vector Machine.
J. Chem. Inf. Model., 2007

ADME Evaluation in Drug Discovery, 6. Can Oral Bioavailability in Humans Be Effectively Predicted by Simple Molecular Property-Based Rules?
J. Chem. Inf. Model., 2007

ADME Evaluation in Drug Discovery, 7. Prediction of Oral Absorption by Correlation and Classification.
J. Chem. Inf. Model., 2007

GPCR Structure-Based Virtual Screening Approach for CB2 Antagonist Search.
J. Chem. Inf. Model., 2007

2006
Genetic Algorithm-Optimized QSPR Models for Bioavailability, Protein Binding, and Urinary Excretion.
J. Chem. Inf. Model., 2006

A Partition-Based Approach to Graph Mining.
Proceedings of the 22nd International Conference on Data Engineering, 2006

2005
Junmei Wang, Romain M. Wolf, James W. Caldwell, Peter A. Kollman, and David A. Case, "Development and testing of a general amber force field" Journal of Computational Chemistry(2004) 25(9) 1157-1174.
J. Comput. Chem., 2005

Mining Generalized Spatio-Temporal Patterns.
Proceedings of the Database Systems for Advanced Applications, 2005

A framework for mining topological patterns in spatio-temporal databases.
Proceedings of the 2005 ACM CIKM International Conference on Information and Knowledge Management, Bremen, Germany, October 31, 2005

Mining in Spatiotemporal Databases.
Proceedings of the Spatial Databases: Technologies, Techniques and Trends, 2005

2004
Development and testing of a general amber force field.
J. Comput. Chem., 2004

FlowMiner: Finding Flow Patterns in Spatio-Temporal Databases.
Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 2004

Discovering Geographical Features for Location-Based Services.
Proceedings of the Database Systems for Advances Applications, 2004

2003
A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations.
J. Comput. Chem., 2003

2001
Automatic parameterization of force field by systematic search and genetic algorithms.
J. Comput. Chem., 2001

2000
How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules?
J. Comput. Chem., 2000

1999
Applications of Genetic Algorithms on the Structure-Activity Relationship Analysis of Some Cinnamamides.
J. Chem. Inf. Comput. Sci., 1999


  Loading...