Jungwei Fan

According to our database, Jungwei Fan authored at least 36 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

FedFSA: Hybrid and federated framework for functional status ascertainment across institutions.

Sunyang Fu, Heling Jia, Maria Vassilaki, Vipina Kuttichi Keloth, Yifang Dang, Yujia Zhou, Muskan Garg, Ronald C. Petersen, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Andrew Wen, Fang Li, Hua Xu, Cui Tao, Jungwei Fan, Hongfang Liu, Sunghwan Sohn

J. Biomed. Informatics, 2024

Automatic uncovering of patient primary concerns in portal messages using a fusion framework of pretrained language models.

Yang Ren, Yuqi Wu, Jungwei W. Fan, Aditya Khurana, Sunyang Fu, Dezhi Wu, Hongfang Liu, Ming Huang

J. Am. Medical Informatics Assoc., 2024

Environment Scan of Generative AI Infrastructure for Clinical and Translational Science.

Betina Idnay, Zihan Xu, William G. Adams, Mohammad Adibuzzaman, Nicholas R. Anderson, Neil Bahroos, Douglas S. Bell, Cody Bumgardner, Thomas R. Campion Jr., Victor M. Castro, James J. Cimino, I. Glenn Cohen, David A. Dorr, Peter L. Elkin, Jungwei W. Fan, Todd Ferris, David J. Foran, David A. Hanauer, Mike Hogarth, Kun Huang, Jayashree Kalpathy-Cramer, Manoj Kandpal, Niranjan S. Karnik, Avnish Katoch, Albert M. Lai, Christophe G. Lambert, Lang Li, Christopher Lindsell, Jinze Liu, Zhiyong Lu, Yuan Luo, Peter McGarvey, Eneida A. Mendonça, Parsa Mirhaji, Shawn N. Murphy, John D. Osborne, Ioannis Ch. Paschalidis, Paul A. Harris, Fred W. Prior, Nicholas J. Shaheen, Nawar Shara, Ida Sim, Umberto Tachinardi, Lemuel R. Waitman, Rosalind J. Wright, Adrian H. Zai, Kai Zheng, Sandra Soo-Jin Lee, Bradley A. Malin, Karthik Natarajan, W. Nicholson Price, Rui Zhang, Yiye Zhang, Hua Xu, Jiang Bian, Chunhua Weng, Yifan Peng

CoRR, 2024

Explainable Diagnosis Prediction through Neuro-Symbolic Integration.

Qiuhao Lu, Rui Li, Elham Sagheb, Andrew Wen, Jinlian Wang, Liwei Wang, Jungwei W. Fan, Hongfang Liu

CoRR, 2024

Use of natural language processing to extract and classify papillary thyroid cancer features from surgical pathology reports.

Ricardo Loor-Torres, Yuqi Wu, Esteban Cabezas, Mariana Borras, David Toro-Tobon, Mayra Durán, Misk Al Zahidy, Maria Mateo Chavez, Cristian Soto Jacome, Jungwei W. Fan, Naykky M. Singh Ospina, Yonghui Wu, Juan P. Brito

CoRR, 2024

2023

Retrospective content analysis of consumer product reviews related to chronic pain.

Jungwei Fan, Wanjing Wang, Ming Huang, Hongfang Liu, W. M. Hooten

Frontiers Digit. Health, March, 2023

Classification of Patient Portal Messages with BERT-based Language Models.

Yang Ren, Dezhi Wu, Aditya Khurana, George M. Mastorakos, Sunyang Fu, Nansu Zong, Jungwei Fan, Hongfang Liu, Ming Huang

Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

2022

Quality assessment of functional status documentation in EHRs across different healthcare institutions.

Sunyang Fu, Maria Vassilaki, Omar A. Ibrahim, Ronald C. Petersen, Sandeep R. Pagali, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Jungwei Fan, Hongfang Liu, Sunghwan Sohn

Frontiers Digit. Health, 2022

Mining Transportation Issues from Patient Portal Messages.

Nan Wang, Ming Huang, Jungwei Fan

Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Quality Assessment of Functional Status Documentation in EHR Across Institutions.

Sunyang Fu, Maria Vassilaki, Omar A. Ibrahim, Ronald C. Petersen, Jennifer St. Sauver, Liwei Wang, Jungwei Fan, Hongfang Liu, Sunghwan Sohn

Proceedings of the AMIA 2022, 2022

2021

An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses.

Andrew Wen, Liwei Wang, Huan He, Sijia Liu, Sunyang Fu, Sunghwan Sohn, Jacob A. Kugel, Vinod C. Kaggal, Ming Huang, Yanshan Wang, Feichen Shen, Jungwei Fan, Hongfang Liu

J. Biomed. Informatics, 2021

The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records.

Sunyang Fu, Andrew Wen, Sandeep R. Pagali, Nansu Zong, Jennifer St Sauver, Sunghwan Sohn, Jungwei Fan, Hongfang Liu

Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Identification of Transportation Barriers in Patient Portal Messages via Deep Semantic Embeddings and Clustering.

Ming Huang, Aditya Khurana, George M. Mastorakos, Jungwei Fan

Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Disparity analysis of patient portal messaging use for COVID-19 in urban versus rural locality.

Ming Huang, Andrew Wen, Huan He, Liwei Wang, Sijia Liu, Yanshan Wang, Nansu Zong, Yue Yu, Julie E. Prigge, Brian Costello, Nilay D. Shah, Henry Ting, Chyke Doubeni, Jungwei Fan, Hongfang Liu, Christi A. Patten

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Patient Asynchronous Response to Coronavirus Disease 2019 (COVID-19): A Retrospective Analysis of Patient Portal Messages.

Ming Huang, Aditya Khurana, George M. Mastorakos, Andrew Wen, Huan He, Liwei Wang, Sijia Liu, Yanshan Wang, Julie E. Prigge, Brian Costello, Nilay D. Shah, Henry Ting, Christi A. Patten, Jungwei Fan, Hongfang Liu

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020

A review of auditing techniques for the Unified Medical Language System.

Ling Zheng, Zhe He, Duo Helen Wei, Vipina Kuttichi Keloth, Jungwei Fan, Luke Lindemann, Xinxin Zhu, James J. Cimino, Yehoshua Perl

J. Am. Medical Informatics Assoc., 2020

A Deep Profiling and Visualization Framework to Audit Clinical Assessment Variation.

Andrew Wen, Feichen Shen, Sungrim Moon, Hongfang Liu, Jungwei Fan

Proceedings of the 33rd IEEE International Symposium on Computer-Based Medical Systems, 2020

A Perturbation Approach to Assessing BERT Robustness for Different Linguistic Aspects in Medical Question-Answering.

Mohamed Y. Elwazir, Andrew Wen, Sungrim Moon, Jungwei Fan

Proceedings of the AMIA 2020, 2020

Big Impact from Small Data: Unsupervised Machine Learning Approaches for Chronic Pain Patient Subgrouping.

Luke A. Carlson, Jennifer St. Sauver, Sunyang Fu, Ahmad P. Tafti, Jungwei Fan, Molly M. Jeffery, Rozalina G. McCoy, Hongfang Liu, Yanshan Wang

Proceedings of the AMIA 2020, 2020

Annotating Chronic Pain Episodes in EHR Text: Guideline Development and Corpus Analysis.

Luke A. Carlson, Molly M. Jeffery, Sunyang Fu, Huan He, Rozalina G. McCoy, Yanshan Wang, W. M. Hooten, Jennifer L. St. Sauver, Hongfang Liu, Jungwei Fan

Proceedings of the AMIA 2020, 2020

Deep Semantic Embeddings and Clustering to Facilitate Identification of Transportation Barriers in Patient Portal Messages.

Ming Huang, Jungwei Fan

Proceedings of the AMIA 2020, 2020

2019

Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation.

Andrew Wen, Sunyang Fu, Sungrim Moon, Mohamed El Wazir, Andrew Rosenbaum, Vinod C. Kaggal, Sijia Liu, Sunghwan Sohn, Hongfang Liu, Jungwei Fan

npj Digit. Medicine, 2019

Adapting and evaluating a deep learning language model for clinical why-question answering.

Andrew Wen, Mohamed Y. Elwazir, Sungrim Moon, Jungwei Fan

CoRR, 2019

Enhancing Clinical Information Retrieval through Context-Aware Queries and Indices.

Andrew Wen, Yanshan Wang, Vinod C. Kaggal, Sijia Liu, Hongfang Liu, Jungwei Fan

Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019

2015

Parsing clinical text: how good are the state-of-the-art parsers?

Min Jiang, Yang Huang, Jungwei Fan, Buzhou Tang, Joshua C. Denny, Hua Xu

BMC Medical Informatics Decis. Mak., 2015

Risk factor detection for heart disease by applying text analytics in electronic medical records.

Manabu Torii, Jungwei Fan, Weili Yang, Theodore Lee, Matthew T. Wiley, Daniel S. Zisook, Yang Huang

J. Biomed. Informatics, 2015

Finding Difficult-to-Disambiguate Words: Towards an Efficient Workflow to Implement Word Sense Disambiguation.

Manabu Torii, Jungwei Fan, Daniel S. Zisook

Proceedings of the 2015 International Conference on Healthcare Informatics, 2015

2014

Building a Treebank of hospital discharge summaries.

Yang Huang, Jungwei Fan, Elly W. Yang, Hua Xu

Proceedings of the AMIA 2014, 2014

2013

Research and applications: Syntactic parsing of clinical text: guideline and corpus development with handling ill-formed sentences.

Jungwei Fan, Elly W. Yang, Min Jiang, Rashmi Prasad, Richard M. Loomis, Daniel Zisook, Joshua C. Denny, Hua Xu, Yang Huang

J. Am. Medical Informatics Assoc., 2013

Disorder Concept Identification from Clinical Notes: an Experience with the ShARe/CLEF 2013 Challenge.

Jungwei Fan, Navdeep Sood, Yang Huang

Proceedings of the Working Notes for CLEF 2013 Conference , 2013

2011

An initial study of full parsing of clinical text using the Stanford Parser.

Hua Xu, Samir AbdelRahman, Min Jiang, Jungwei Fan, Yang Huang

Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2009

A review of auditing methods applied to the content of controlled biomedical terminologies.

Xinxin Zhu, Jungwei Fan, David M. Baorto, Chunhua Weng, James J. Cimino

J. Biomed. Informatics, 2009

2007

Using contextual and lexical features to restructure and validate the classification of biomedical concepts.

Jungwei Fan, Hua Xu, Carol Friedman

BMC Bioinform., 2007

Gene symbol disambiguation using knowledge-based profiles.

Hua Xu, Jungwei Fan, George Hripcsak, Eneida A. Mendonça, Marianthi Markatou, Carol Friedman

Bioinform., 2007

Using Distributional Analysis to Semantically Classify UMLS Concepts.

Jungwei Fan, Hua Xu, Carol Friedman

Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

Combining multiple evidence for gene symbol disambiguation.

Hua Xu, Jungwei Fan, Carol Friedman

Proceedings of the Biological, translational, and clinical language processing, 2007