Julien Dorier

According to our database, Julien Dorier authored at least 5 papers between 2013 and 2019.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2019

KnotProt 2.0: a database of proteins with knots and other entangled structures.

Pawel Dabrowski-Tumanski, Pawel Rubach, Dimos Goundaroulis, Julien Dorier, Piotr Sulkowski, Kenneth C. Millett, Eric J. Rawdon, Andrzej Stasiak, Joanna I. Sulkowska

Nucleic Acids Res., 2019

2018

Knoto-ID: a tool to study the entanglement of open protein chains using the concept of knotoids.

Julien Dorier, Dimos Goundaroulis, Fabrizio Benedetti, Andrzej Stasiak

Bioinform., 2018

Expert curation for building network-based dynamical models: a case study on atherosclerotic plaque formation.

Amel Bekkar, Anne Estreicher, Anne Niknejad, Cristina Casals-Casas, Alan J. Bridge, Ioannis Xenarios, Julien Dorier, Isaac Crespo

Database J. Biol. Databases Curation, 2018

2016

Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method.

Julien Dorier, Isaac Crespo, Anne Niknejad, Robin Liechti, Martin Ebeling, Ioannis Xenarios

BMC Bioinform., 2016

2013

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.

Claudine Chaouiya, Duncan Bérenguier, Sarah M. Keating, Aurélien Naldi, Martijn P. van Iersel, Nicolas Rodriguez, Andreas Dräger, Finja Büchel, Thomas Cokelaer, Bryan M. Kowal, Benjamin Wicks, Emanuel J. V. Gonçalves, Julien Dorier, Michel Page, Pedro T. Monteiro, Axel von Kamp, Ioannis Xenarios, Hidde de Jong, Michael Hucka, Steffen Klamt, Denis Thieffry, Nicolas Le Novère, Julio Saez-Rodriguez, Tomás Helikar

BMC Syst. Biol., 2013