Julie A. Dickerson

According to our database, Julie A. Dickerson authored at least 46 papers between 1993 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Reducing the Computational Complexity of the Volterra Series Using Permutation/Product Maps.

Aaron J. Fonseca, Andrew K. Bolstad, Julie A. Dickerson

Proceedings of the IEEE Canadian Conference on Electrical and Computer Engineering, 2024

2017

Strawberry: Fast and accurate genome-guided transcript reconstruction and quantification from RNA-Seq.

Ruolin Liu, Julie A. Dickerson

PLoS Comput. Biol., 2017

Differential alternative splicing patterns with differential expression to computationally extract plant molecular pathways.

Gaurav Kandoi, Julie A. Dickerson

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016

The quality of metabolic pathway resources depends on initial enzymatic function assignments: a case for maize.

Jesse R. Walsh, Mary L. Schaeffer, Peifen Zhang, Seung Yon Rhee, Julie A. Dickerson, Taner Z. Sen

BMC Syst. Biol., 2016

2014

Fuzzy Navigation Engine: Mitigating the Cognitive Demands of Semi-Natural Locomotion.

William Eric Marsh, Jonathan W. Kelly, Julie A. Dickerson, James H. Oliver

Presence Teleoperators Virtual Environ., 2014

A novel class dependent feature selection method for cancer biomarker discovery.

Wengang Zhou, Julie A. Dickerson

Comput. Biol. Medicine, 2014

A computational platform to maintain and migrate manual functional annotations for BioCyc databases.

Jesse R. Walsh, Taner Z. Sen, Julie A. Dickerson

BMC Syst. Biol., 2014

Comparisons of computational methods for differential alternative splicing detection using RNA-seq in plant systems.

Ruolin Liu, Ann E. Loraine, Julie A. Dickerson

BMC Bioinform., 2014

2013

Semi-automated Constraint-based Metabolic Model Generation.

Jesse R. Walsh, Julie A. Dickerson

Proceedings of the ACM Conference on Bioinformatics, 2013

Incorporating Gene Annotations as Node Metadata to Improve Network Centrality Measures for Better Node Ranking.

Divya Mistry, Julie A. Dickerson

Proceedings of the ACM Conference on Bioinformatics, 2013

Computational methods for alternative splicing detection using RNA-seq.

Ruolin Liu, Julie A. Dickerson

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

PLEXdb: gene expression resources for plants and plant pathogens.

Sudhansu Dash, John L. Van Hemert, Lu Hong, Roger P. Wise, Julie A. Dickerson

Nucleic Acids Res., 2012

Plantmetabolomics.org: mass spectrometry-based <i>Arabidopsis</i> metabolomics - database and tools update.

Preeti Bais, Stephanie M. Moon-Quanbeck, Basil J. Nikolau, Julie A. Dickerson

Nucleic Acids Res., 2012

StruLocPred: structure-based protein subcellular localisation prediction using multi-class support vector machine.

Wengang Zhou, Julie A. Dickerson

Int. J. Data Min. Bioinform., 2012

Network motif comparison rationalizes Sec1/Munc18-SNARE regulation mechanism in exocytosis.

Tian Xia, Jiansong Tong, Shailendra S. Rathore, Xun Gu, Julie A. Dickerson

BMC Syst. Biol., 2012

Discriminating response groups in metabolic and regulatory pathway networks.

John L. Van Hemert, Julie A. Dickerson

Bioinform., 2012

2011

Monte Carlo randomization tests for large-scale abundance datasets on the GPU.

John L. Van Hemert, Julie A. Dickerson

Comput. Methods Programs Biomed., 2011

Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities.

Yao Fu, Laura R. Jarboe, Julie A. Dickerson

BMC Bioinform., 2011

CytoModeler: a tool for bridging large-scale network analysis and dynamic quantitative modeling.

Tian Xia, John L. Van Hemert, Julie A. Dickerson

Bioinform., 2011

2010

MetNetGE: interactive views of biological networks and ontologies.

Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin Wurtele, Julie A. Dickerson

BMC Bioinform., 2010

OmicsAnalyzer: a Cytoscape plug-in suite for modeling omics data.

Tian Xia, John L. Van Hemert, Julie A. Dickerson

Bioinform., 2010

PathwayAccess: CellDesigner plugins for pathway databases.

John L. Van Hemert, Julie A. Dickerson

Bioinform., 2010

Biological pathway data integration trends, techniques, issues and challenges: A survey.

Shubhalaxmi Kher, Julie A. Dickerson, Neelam Rawat

Proceedings of the Second World Congress on Nature & Biologically Inspired Computing, 2010

Visualizing Multivariate Hierarchic Data Using Enhanced Radial Space-Filling Layout.

Ming Jia, Ling Li, Erin Boggess, Eve Syrkin Wurtele, Julie A. Dickerson

Proceedings of the Advances in Visual Computing - 6th International Symposium, 2010

Gene Regulatory Network Reconstruction Based on Gene Expression and Transcription Factor Activities.

Yao Fu, Laura R. Jarboe, Julie A. Dickerson

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2010

2009

<i>Arabidopsis </i>gene co-expression network and its functional modules.

Linyong Mao, John L. Van Hemert, Sudhansu Dash, Julie A. Dickerson

BMC Bioinform., 2009

Visualization of Gene Regulatory Networks.

Muhieddine El Kaissi, Ming Jia, Dirk Reiners, Julie A. Dickerson, Eve Syrkin Wurtele

Proceedings of the Advances in Visual Computing, 5th International Symposium, 2009

Reaction Centric Layout for Metabolic Networks.

Muhieddine El Kaissi, Ming Jia, Dirk Reiners, Julie A. Dickerson, Eve Syrkin Wurtele

Proceedings of the Advances in Visual Computing, 5th International Symposium, 2009

2008

OmicsViz: Cytoscape plug-in for visualizing omics data across species.

Tian Xia, Julie A. Dickerson

Bioinform., 2008

2007

Web Site Recommendation Using HTTP Traffic.

Ming Jia, Shaozhi Ye, Xing Li, Julie A. Dickerson

Proceedings of the 7th IEEE International Conference on Data Mining (ICDM 2007), 2007

Modeling protein interaction network and mechanisms in exocytosis.

Wen Zhou, Tian Xia, Jiansong Tong, Julie A. Dickerson, Bo Su, Xun Gu

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

2006

Hierarchical visualization of metabolic networks using virtual reality.

Yuting Yang, Eve Syrkin Wurtele, Carolina Cruz-Neira, Julie A. Dickerson

Proceedings of the Proceedings VRCIA 2006 ACM International Conference on Virtual Reality Continuum and its Applications, 2006

A testbed for evaluation and analysis of stepping stone attack attribution techniques.

Jianqiang Xin, Linfeng Zhang, Brad Aswegan, John Dickerson, Julie A. Dickerson, Thomas E. Daniels, Yong Guan

Proceedings of the 2nd International Conference on Testbeds & Research Infrastructures for the DEvelopment of NeTworks & COMmunities (TRIDENTCOM 2006), 2006

2005

Modeling gene expression networks using fuzzy logic.

Pan Du, Jian Gong, Eve Syrkin Wurtele, Julie A. Dickerson

IEEE Trans. Syst. Man Cybern. Part B, 2005

BarleyBase - an expression profiling database for plant genomics.

Lishuang Shen, Jian Gong, Rico A. Caldo, Dan Nettleton, Dianne Cook, Roger P. Wise, Julie A. Dickerson

Nucleic Acids Res., 2005

Integration of metabolic networks and gene expression in virtual reality.

Yuting Yang, Levent Engin, Eve Syrkin Wurtele, Carolina Cruz-Neira, Julie A. Dickerson

Bioinform., 2005

BarleyExpress: a web-based submission tool for enriched microarray database annotations.

Xiaoyun Tang, Lishuang Shen, Julie A. Dickerson

Bioinform., 2005

Using the biological taxonomy to access biological literature with PathBinderH.

Jing Ding, Karthikeyan Viswanathan, Daniel Berleant, Laron M. Hughes, Eve Syrkin Wurtele, Daniel A. Ashlock, Julie A. Dickerson, Andy W. Fulmer, Patrick S. Schnable

Bioinform., 2005

2004

Developing an Integrated Wireless System for Fully Immersive Virtual Reality Environments.

Galen Faidley, Jayme Hero, Kukjin Lee, Bernard Lwakabamba, Robert D. Walstrom, Feng Chen, Julie A. Dickerson, Diane T. Rover, Robert J. Weber, Carolina Cruz-Neira

Proceedings of the 8th International Symposium on Wearable Computers (ISWC 2004), 31 October, 2004

2003

Fuzzy feature extraction and visualization for intrusion detection.

Jianqiang Xin, John E. Dickerson, Julie A. Dickerson

Proceedings of the 12th IEEE International Conference on Fuzzy Systems, 2003

Creating Metabolic Network Models using Text Mining and Expert Knowledge.

Julie A. Dickerson, Daniel Berleant, Z. Cox, W. Qi, Eve Syrkin Wurtele

Proceedings of the Computational Biology and Genome Informatics, 2003

1999

A comparison of radial basis function networks and fuzzy neural logic networks for autonomous star recognition.

Julie A. Dickerson, J. Hong, Z. Cox, D. Bailey

Proceedings of the International Joint Conference Neural Networks, 1999

1996

Fuzzy function approximation with ellipsoidal rules.

Julie A. Dickerson, Bart Kosko

IEEE Trans. Syst. Man Cybern. Part B, 1996

Fuzzy throttle and brake control for platoons of smart cars.

Hyun Mun Kim, Julie A. Dickerson, Bart Kosko

Fuzzy Sets Syst., 1996

1994

Virtual Worlds as Fuzzy Cognitive Maps.

Julie A. Dickerson, Bart Kosko

Presence Teleoperators Virtual Environ., 1994

1993

Fuzzy function learning with covariance ellipsoids.

Julie A. Dickerson, Bart Kosko

Proceedings of International Conference on Neural Networks (ICNN'88), San Francisco, CA, USA, March 28, 1993