Jotun Hein
Orcid: 0000-0002-8100-0824
According to our database1,
Jotun Hein
authored at least 54 papers
between 1995 and 2022.
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Bibliography
2022
Systematic inference of indirect transcriptional regulation by protein kinases and phosphatases.
PLoS Comput. Biol., 2022
Ancestral protein sequence reconstruction using a tree-structured Ornstein-Uhlenbeck variational autoencoder.
Proceedings of the Tenth International Conference on Learning Representations, 2022
2021
SIAM J. Discret. Math., 2021
J. Chem. Inf. Model., 2021
KwARG: parsimonious reconstruction of ancestral recombination graphs with recurrent mutation.
Bioinform., 2021
2016
Phylogenetic Analysis Reveals That ERVs "Die Young" but HERV-H Is Unusually Conserved.
PLoS Comput. Biol., 2016
2015
CoRR, 2015
Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs.
BMC Bioinform., 2015
2014
An investigation into irreducible autocatalytic sets and power law distributed catalysis.
Nat. Comput., 2014
2013
BMC Bioinform., 2013
StatAlign 2.0: combining statistical alignment with RNA secondary structure prediction.
Bioinform., 2013
Oxfold: kinetic folding of RNA using stochastic context-free grammars and evolutionary information.
Bioinform., 2013
2012
The Role of Flexibility and Conformational Selection in the Binding Promiscuity of PDZ Domains.
PLoS Comput. Biol., 2012
BMC Bioinform., 2012
2010
PLoS Comput. Biol., 2010
ERCIM News, 2010
Reticular Alignment: A progressive corner-cutting method for multiple sequence alignment.
BMC Bioinform., 2010
Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity.
BMC Bioinform., 2010
Genome-wide functional element detection using pairwise statistical alignment outperforms multiple genome footprinting techniques.
Bioinform., 2010
2009
Rahnuma: hypergraph-based tool for metabolic pathway prediction and network comparison.
Bioinform., 2009
Bioinform., 2009
2008
BMC Bioinform., 2008
BMC Bioinform., 2008
Combining statistical alignment and phylogenetic footprinting to detect regulatory elements.
Bioinform., 2008
StatAlign: an extendable software package for joint Bayesian estimation of alignments and evolutionary trees.
Bioinform., 2008
Accurate Computation of Likelihoods in the Coalescent with Recombination Via Parsimony.
Proceedings of the Research in Computational Molecular Biology, 2008
2007
Bioinform., 2007
2006
Counting All Possible Ancestral Configurations of Sample Sequences in Population Genetics.
IEEE ACM Trans. Comput. Biol. Bioinform., 2006
PLoS Comput. Biol., 2006
Bioinform., 2006
Bioinform., 2006
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006
2005
Proceedings of the Algorithms in Bioinformatics, 5th International Workshop, 2005
2004
Proceedings of the Comparative Genomics, 2004
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
Wiley, ISBN: 978-0-19-852996-5, 2004
2003
Nucleic Acids Res., 2003
An Efficient Algorithm for Statistical Multiple Alignment on Arbitrary Phylogenetic Trees.
J. Comput. Biol., 2003
Bioinform., 2003
Proceedings of the Algorithms in Bioinformatics, Third International Workshop, 2003
Proceedings of the Algorithms in Bioinformatics, Third International Workshop, 2003
Proceedings of the Algorithms in Bioinformatics, Third International Workshop, 2003
2001
Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree.
Appl. Math. Lett., 2001
Proceedings of the 6th Pacific Symposium on Biocomputing, 2001
1999
RNA secondary structure prediction using stochastic context-free grammars and evolutionary history.
Bioinform., 1999
1998
Proceedings of the Combinatorial Pattern Matching, 9th Annual Symposium, 1998
1996
1995
Proceedings of the Combinatorial Pattern Matching, 6th Annual Symposium, 1995