José L. Oliver

According to our database, José L. Oliver authored at least 17 papers between 1989 and 2019.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2019

sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression.

Ernesto Aparicio-Puerta, Ricardo Lebrón, Antonio Rueda, Cristina Gómez-Martín, Stavros Giannoukakos, David Jáspez, José María Medina, Andreja Zubkovic, Igor Jurak, Bastian Fromm, Juan Antonio Marchal, José L. Oliver, Michael Hackenberg

Nucleic Acids Res., 2019

2017

NGSmethDB 2017: enhanced methylomes and differential methylation.

Ricardo Lebrón, Cristina Gómez-Martín, Pedro Carpena, Pedro Bernaola-Galván, Guillermo Barturen, Michael Hackenberg, José L. Oliver

Nucleic Acids Res., 2017

Error Correction in Methylation Profiling From NGS Bisulfite Protocols.

Guillermo Barturen, José L. Oliver, Michael Hackenberg

Proceedings of the Algorithms for Next-Generation Sequencing Data, Techniques, 2017

2015

sRNAtoolbox: an integrated collection of small RNA research tools.

Antonio Rueda, Guillermo Barturen, Ricardo Lebrón, Cristina Gómez-Martín, Ángel M. Alganza, José L. Oliver, Michael Hackenberg

Nucleic Acids Res., 2015

2014

NGSmethDB: an updated genome resource for high quality, single-cytosine resolution methylomes.

Stefanie Geisen, Guillermo Barturen, Ángel M. Alganza, Michael Hackenberg, José L. Oliver

Nucleic Acids Res., 2014

DNA clustering and genome complexity.

Francisco Dios, Guillermo Barturen, Ricardo Lebrón, Antonio Rueda, Michael Hackenberg, José L. Oliver

Comput. Biol. Chem., 2014

2013

Best practices for SNV and methylation calling from bisulfite sequencing data.

Guillermo Barturen, José L. Oliver, Michael Hackenberg

Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

2011

NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data.

Michael Hackenberg, Guillermo Barturen, José L. Oliver

Nucleic Acids Res., 2011

WordCluster: detecting clusters of DNA words and genomic elements.

Michael Hackenberg, Pedro Carpena, Pedro Bernaola-Galván, Guillermo Barturen, Ángel M. Alganza, José L. Oliver

Algorithms Mol. Biol., 2011

2006

<i>CpGcluster</i>: a distance-based algorithm for CpG-island detection.

Michael Hackenberg, Christopher Previti, Pedro Luis Luque-Escamilla, Pedro Carpena, José Martínez-Aroza, José L. Oliver

BMC Bioinform., 2006

2004

IsoFinder: computational prediction of isochores in genome sequences.

José L. Oliver, Pedro Carpena, Michael Hackenberg, Pedro Bernaola-Galván

Nucleic Acids Res., 2004

2003

Isochores merit the prefix 'iso'.

Wentian Li, Pedro Bernaola-Galván, Pedro Carpena, José L. Oliver

Comput. Biol. Chem., 2003

1999

SEGMENT: identifying compositional domains in DNA sequences.

José L. Oliver, Ramón Román-Roldán, Javier Pérez, Pedro Bernaola-Galván

Bioinform., 1999

1996

Application of information theory to DNA sequence analysis: A review.

Ramón Román-Roldán, Pedro Bernaola-Galván, José L. Oliver

Pattern Recognit., 1996

1994

Entropic feature for sequence pattern through iterated function systems.

Ramón Román-Roldán, Pedro Bernaola-Galván, José L. Oliver

Pattern Recognit. Lett., 1994

1990

Chloroplast genes transferred to the nuclear plant genome have adjusted to nuclear base composition and codon usage.

José L. Oliver, A. Marin, Jose Miguel Martinez-Zapater

Nucleic Acids Res., 1990

1989

SDSE: a software package to simulate the evolution of a pair of DNA sequences.

José L. Oliver, A. Marin, Juan-Ramón Medina

Comput. Appl. Biosci., 1989