Jos Kleinjans

According to our database, Jos Kleinjans authored at least 13 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

A bioinformatics workflow to detect genes with DNA methylation alterations: a case study of analyzing MeDIP-seq data in cardiac microtissue exposed to epirubicin.

Nhan Nguyen, Matthias Lienhard, Ralf Herwig, Jos Kleinjans, Danyel Jennen

Proceedings of the ICBBB 2022: 12th International Conference on Bioscience, Biochemistry and Bioinformatics, Tokyo, Japan, January 7, 2022

2021

FuSe: a tool to move RNA-Seq analyses from chromosomal/gene loci to functional grouping of mRNA transcripts.

Rajinder Gupta, Yannick Schrooders, Marcha Verheijen, Adrian Roth, Jos Kleinjans, Florian Caiment

Bioinform., 2021

2019

DynOVis: a web tool to study dynamic perturbations for capturing dose-over-time effects in biological networks.

T. J. M. Kuijpers, J. E. J. Wolters, Jos C. S. Kleinjans, Danyel G. J. Jennen

BMC Bioinform., 2019

2016

ToxDB: pathway-level interpretation of drug-treatment data.

Christopher Hardt, Moritz Emanuel Beber, Axel Rasche, Atanas Kamburov, Dennie G. A. J. Hebels, Jos C. S. Kleinjans, Ralf Herwig

Database J. Biol. Databases Curation, 2016

Transcriptomic and metabolomic data integration.

Rachel Cavill, Danyel Jennen, Jos Kleinjans, Jacob J. Briedé

Briefings Bioinform., 2016

2015

MagiCMicroRna: a web implementation of AgiMicroRna using shiny.

Maarten Coonen, Daniel Theunissen, Jos Kleinjans, Danyel Jennen

Source Code Biol. Medicine, 2015

Pattern recognition methods to relate time profiles of gene expression with phenotypic data: a comparative study.

Diana M. Hendrickx, Danyel G. J. Jennen, Jacob J. Briedé, Rachel Cavill, Theo M. de Kok, Jos C. S. Kleinjans

Bioinform., 2015

diXa: a data infrastructure for chemical safety assessment.

Diana M. Hendrickx, Hugo J. W. L. Aerts, Florian Caiment, Dominic Clark, Timothy M. D. Ebbels, Chris T. A. Evelo, Hans Gmuender, Dennie G. A. J. Hebels, Ralf Herwig, Jürgen Hescheler, Danyel G. J. Jennen, Marlon J. A. Jetten, Stathis Kanterakis, Hector C. Keun, Vera Matser, John P. Overington, Ekaterina Pilicheva, Ugis Sarkans, Marcelo P. Segura-Lepe, Isaia Sotiriadou, Timo Wittenberger, Clemens Wittwehr, Antonella Zanzi, Jos C. S. Kleinjans

Bioinform., 2015

2011

Integrating transcriptomics and metabonomics to unravel modes-of-action of 2, 3, 7, 8-tetrachlorodibenzo-p-dioxin (TCDD) in HepG2 cells.

Danyel Jennen, Ainhoa Ruiz-Aracama, Christina Magkoufopoulou, Ad Peijnenburg, Arjen Lommen, Joost van Delft, Jos Kleinjans

BMC Syst. Biol., 2011

2010

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining (Correction).

Kristina M. Hettne, Antony J. Williams, Erik M. van Mulligen, Jos Kleinjans, Valery Tkachenko, Jan A. Kors

J. Cheminformatics, 2010

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining.

Kristina M. Hettne, Antony J. Williams, Erik M. van Mulligen, Jos Kleinjans, Valery Tkachenko, Jan A. Kors

J. Cheminformatics, 2010

2009

A dictionary to identify small molecules and drugs in free text.

Kristina M. Hettne, Rob H. Stierum, Martijn J. Schuemie, Peter J. M. Hendriksen, Bob J. A. Schijvenaars, Erik M. van Mulligen, Jos Kleinjans, Jan A. Kors

Bioinform., 2009

2008

Combining Shapley value and statistics to the analysis of gene expression data in children exposed to air pollution.

Stefano Moretti, Danitsja van Leeuwen, Hans Gmuender, Stefano Bonassi, Joost van Delft, Jos Kleinjans, Fioravante Patrone, Domenico Franco Merlo

BMC Bioinform., 2008